XLOC_024823


Basic Information

Item Value
gene id XLOC_024823
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 35052056 ~ 35116923 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00049424
CACTCGTCTCTCTACACAGCTTACTTTTCACATAAAGTTACAcgtcacacttattcacactaaTCTCACAAGATTCACAAGCTCACAGTTCTCAATATCCAACAAAAATCTCTATCACACTATAATCACTGGGTTAGGGAAAACAGGGACTCTCTCCGTGCTTTGCCGCTCTGCCTCTTTATAAAGCCTGGAAGCTCAATCAACAGCAACCGATCCGATTTGCTCTGATTGAAAACAGGTGCGGCTGGTTTGGAACGCTGCTCaatgagagagaggcagagagacagagagagagatagagagagagagcgattaataaaacaaaaggaagAGCAATAAGCTGCCACTCACACCAACAACTTATTACCTAAATACATCATAGGATGTAACAGTATAGATAAGGATATTTTTTCACTGACTAAATGACCAGCAGGTACGTTTGACTTTTTGTTTCTTGAGTCTCCAGACACAAAACTTCACGATGAGTCAACAAGGCTGCTGTTGTTTGACTAACATTTTACAATGATTAGCAGGATAAGGGCTCAACATGCACCTACACTTgaactttttcatttattatatggCCTAATTGTATTACTTTAAGGGAACGTTTAACTGCATATACACTTTTATAGATGCTGTAAACAATACATGAGCCTTTATCATTCTTATGACATTTAAGTCCAGATACTAATAAATTAAACTTTCGGCAATGAGCAAGAAAAATCATCTTTTCTAGACACATTGatgtggctcttaaaagagcctttggttttaatttaaacgtcAGAAAGTGGTTTAGGCGCGCTCTCCACGGATGCGGCGAGCCAGCTGGATGTCCTTG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00049424 True 844 lncRNA 0.39 2 35052056 35116923

Neighbor

gene id symbol gene type direction distance location
XLOC_024822 si:dkey-108k21.19 coding downstream 4218 35047454 ~ 35047838 (-)
XLOC_024821 hist1h4l coding downstream 5942 35045803 ~ 35046114 (-)
XLOC_024820 zgc:114046 coding downstream 6806 35044524 ~ 35045250 (-)
XLOC_024819 NA coding downstream 9946 35002155 ~ 35042110 (-)
XLOC_024818 NA coding downstream 72498 34975083 ~ 34979558 (-)
XLOC_024834 FQ312024.1 coding upstream 3358 35120281 ~ 35120691 (-)
XLOC_024835 si:ch73-36p18.1 coding upstream 4409 35121332 ~ 35121946 (-)
XLOC_024836 zgc:171759 coding upstream 7279 35124202 ~ 35124576 (-)
XLOC_024837 hist1h4l coding upstream 8790 35125713 ~ 35126024 (-)
XLOC_024838 FP236630.1 coding upstream 10308 35127231 ~ 35127617 (-)
XLOC_024816 NA non-coding downstream 113925 34933831 ~ 34938131 (-)
XLOC_024813 NA non-coding downstream 328080 34672068 ~ 34723976 (-)
XLOC_024811 NA non-coding downstream 408852 34641440 ~ 34643204 (-)
XLOC_024851 NA non-coding upstream 154355 35271278 ~ 35276350 (-)
XLOC_024853 NA non-coding upstream 195953 35312876 ~ 35313623 (-)
XLOC_024859 NA non-coding upstream 618128 35735051 ~ 35735523 (-)
XLOC_024860 NA non-coding upstream 626076 35742999 ~ 35744148 (-)
XLOC_024861 NA non-coding upstream 766654 35883577 ~ 35885483 (-)

Expression


Co-expression Network