LOC110491195


Basic Information

Item Value
gene id LOC110491195
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 7747187 ~ 7748423 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021564541.2
CACCGTGGTGCCACCACCCCCAAGCTACCTGACACCATCAGCCCCACCGGTTCATATGATGATGTCTGCCTCTCTCGGACCACTCAATGCTGTCTACCCAGCTCCCACAAACCCTGGGTTCCCACCCCCTGGATACGTGACCCCTTCCGCTCCTCCGATGATGCCTGCCCCTTTCGGACACCCTAATGCTGTCTACCCCGCGCCCACGAACCCCGGAATCCCGCCAGTACCCCCAGGCTACGTGCCCCCTCCGGTCCCTGCGATGATGCCTGCCCCTTTCGGACACCCTAATGCTGTCTACCCTGCGCCCACGAACCCCGGAATCCCGCCAGTACCCCCAGGCTACGTGCCCCCTCCGGTCCCTGCGATGATGCCTGCCCCTCCGCCTGATCTCCGACCCACCGGCTGCCCCCCAGGACTGGAATACCTGATTCATGTGGACCAGCTTCTCGTCCATCAGACTTTTCATCTGGCCGAACTGCTGGGTTGGGAGGTTAGAAATTCCTACAATGTGAAGAACAGCATCGGGCAACACGTGTTTCTGGCGGAAGAGGAGAACAACTGCTGCACCCTACAGTGCTTTGGCCCCAGCCGACCTTTCACCTTTCACATCCAGGACAACCTGGGGCAGGAGGTGTTGACCCTGACGCGCCCTCTTGCGTGCAGCTACTGCTGCTTCCCCTGCTGCCTGCAAGACCTGGAGGTGCAGAGTCCCCCCGGTATTCCCATAGGGTATGTGGTGCAGGAGTGTCACCCGTTCCTGCCCAAACTCACTGTGCTGAACGAGAGGAGACAGCCTCAGCTGAGGATCAAAGGGCCGCTGTTTTTCTGTAGTTGTTGCAGAGACGTCACATTTGAGGTGAAGACTCTGGATGACTCAATGTTGATAGGGCACATCGGTAAGCAGTGGTCCGGCTTCCTGCGCGAAGTCTACACGGACGCGGATCATTTTGGGATCGTGTTCCCAATGGACCTGGATGTGAAGATGAAGGCTGTGCTGCTGGGAGCCTGCTTCCTGATCGATTTCCTGTATtttgaggaaaggaaaggagacaagaaaCATTGAACTTTTACTCTGTGCCGACTACGGAACCCACGGCATCAAAATTACATTAGACCTACAATAAAGTTGCATGTCAAAATCAACAACTCCAAATCCCTCTCATTGTGTATATCTAACGGTCCTCTCCCCAGTGTTATTCTCCATCTTAAACAACTTCCTacttctcagcatcaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021564541.2 True 1237 mRNA 0.56 1 7747187 7748423

Neighbor

gene id symbol gene type direction distance location
LOC110491194 hsf2bp coding upstream 1211 7735574 ~ 7745976 (+)
LOC110491192 orc4 coding upstream 12616 7729466 ~ 7734571 (+)
LOC118965231 LOC106593490 coding upstream 70450 7673545 ~ 7676737 (+)
LOC110495388 mmadhc coding upstream 114312 7624474 ~ 7632875 (+)
LOC118965426 NA coding upstream 163514 7583520 ~ 7583673 (+)
LOC110491196 LOC106575747 coding downstream 983 7749406 ~ 7767337 (+)
LOC118965232 LOC106575843 coding downstream 74280 7822703 ~ 7827097 (+)
LOC110525651 LOC106575849 coding downstream 147164 7895587 ~ 7900191 (+)
LOC110495467 LOC100653484 coding downstream 152206 7900629 ~ 7934716 (+)
LOC110504762 LOC106573845 coding downstream 260509 8008932 ~ 8017366 (+)
G570696 NA non-coding upstream 35387 7710319 ~ 7711800 (+)
G570695 NA non-coding upstream 37866 7708192 ~ 7709321 (+)
G570683 LOC106574758 non-coding upstream 56186 7690214 ~ 7691001 (+)
G570679 NA non-coding upstream 80277 7666445 ~ 7666910 (+)
G570674 NA non-coding upstream 86864 7660122 ~ 7660323 (+)
G570731 NA non-coding downstream 37698 7786121 ~ 7787688 (+)
G570741 LOC106561090 non-coding downstream 49186 7797609 ~ 7798425 (+)
G570742 NA non-coding downstream 49712 7798135 ~ 7798834 (+)
G570743 NA non-coding downstream 54454 7802877 ~ 7804126 (+)
G570750 NA non-coding downstream 80424 7828847 ~ 7830431 (+)
G570616 NA other upstream 259589 7487205 ~ 7487598 (+)
G570601 LOC100846954 other upstream 306439 7438559 ~ 7440748 (+)
G570541 NA other upstream 440536 7304962 ~ 7306651 (+)
LOC110495616 LOC106574734 other upstream 912893 6805822 ~ 6834301 (+)
LOC110528754 LOC106575679 other upstream 981041 6761084 ~ 6767166 (+)
LOC110497026 ptprn other downstream 287249 8009587 ~ 8061480 (+)
G570827 LOC107379067 other downstream 314684 8063107 ~ 8071558 (+)

Expression


Co-expression Network