LOC110527270 (LOC106574807)


Basic Information

Item Value
gene id LOC110527270
gene name LOC106574807
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 8620663 ~ 8626882 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036982429.1
aacacacacttttacactcataaTTTGCTGCTGGtgctctgttctttattttattcttattatcgatcctgatgtctagtcactttaccctgccttcgtgtacatatctacctcagaTACCCCGTACCTCTTCatgttgatctgAatccgactaatgaatacacccctgaagTTCAATCAAATCCGcaatttcttttttttactgTCAGAAGATAGGCTACTTGCACGGCGAGCTGACACTTCCTCCAGCTTTGGCAACATCCGGATTCCAGTCGAGATGGTCATGGCGGAGGGTGCAGCTGTTATGAGGAGGAATCGACCAGGGACTAAAGAAAAGGACTTCTACAACTGGCCCGATGAGTCATTCGAGGAGATGGACAGCACACTGGCTGTGCAGCAGTACATCCAACAGAACATCCGTACAGACTGCTCCAACATGGACAAGATCCTGGAGCCCCCAGAGGGTCAGGATGAGGGGGTCTGGAAGTACGAACACCTCAGGCAGTTCTGTTTGGAGCTGAACGGACTTGCTGTGAAACTACAGGGAGAATGCCACCCAGACACATGCACCCAGATGACGGCAACAGAGCAGTGGATCTTCCTCTGTGCTGCACACAAGACTCCCAAAGAGTGTCCAGCCATCGACTACACCAGACACACTCTGGACGGAGCTGCCTGCCTCCTCAACAGTAACAAGTACTTCCCTAGCAGAGTGAGCATTAAAGAGTCCTCAGTAGGGAAACTGGGTTCAGTTTGCCGGCGGATCTACAGGATATTCTCCCACGCTTACTTCCACCATCGTCAGATCTTTGACAAGTATGAGAACGAGACGTTCCTGTGCCATCGGTTCACGCGCTTCGTGATGAAGTACAACCTGATGTCCAAGGACAACCTGATCGTACCCATCATGGAGGATGAGACTAACCCTAACGAAGCAGAGGGCGAGAGCGACGCCTGAGGACTAGGGATCTGAAGAGGATCTGCTACACCCTGCCAAACTATTTCAAACACATGGCTGtctcacacacccacccacaaccACACAATACACTAAAGTACACTAAAATCACCAGTTTTTAAGTAGAATATTTTCAATATTGTATGAACATCCTAATTTAGCTTGTATGTTTCAGAGAACAAGACAATGTTGTGGTTAAATGACTAACCAATATACACTGTGGCCAGTtaattaggtacacccatctagttcCGGGTCAAACCCTGCTTTGCCACCAAAACAGCCTGTCGGAAACGTTCCACATGGATGTCGGTCCATGCAGACGGGATGGCATCACGCTGTAGCTGCAGATTGGACGGCGGGGACATTGATACTGCAAACAGCCCGGTCTACCTCATCCCAAAGATGCTCTCTATTGGGTTTGGTCAGCAACAATGTTCAGATACGCTGTGACGTTCGATCGTTGCtaaattggtatcaagggacctaacgtgtgccaggaaaacgttccccacaccagtacaccaccgccaccagcctgtaccgttgacaccaggtaGGATGGGTAAACgcactcatgctgcttacgccaaaacCTGACTCTGTCATCAGCATGAACCGGGAAacgggattcatcagaccaggcaaGGTTTTTCCACTCCTGATTGTCCAGTGTTGGTAATTGCGTTCCCACTAGTGCTTCTTCTTagttttagctgataggagtggaaccccgTGTGGTCGTCTGCTACAGTAGCCCATCCTTGACAAGgatcgacgagttgtgcgttctgaaatgccgttctgcacaccactgttgtactgtgccGTTAGTGGccagcctgttagcttgcacgattcttgccattctccttcgacctctcatcaacgagctgttttcacccacagaactgccactgactggatgttttttgtttgtcgcaccattcacAGTAAACTCTAGACATTCGTGCGTGAAAATCCCAGGAAGCCGGCTCTTTCAGAGATATTGGATCCGGTGTTCCTAGCAGACGATAACCACGCTCAAAGTCACTTAGGCCGCTAGTTTGACACATTCTAGCATTCAATCAAACAGTTACTGAATGGCTCGATGCCTGTCAGCCTACTTTATAGAGCAAGCCacagccacgtgactcactgtaggAGCAAATCATTttggtgaacagggtggtgtaccTGATAAACTGTGACACCCTTTGCTAGTTACTTTATCATGTGCTTTCTGTTTGGTCCTTGGGCAGCGTTTACACAGGCAACCAAATTCTTATGGGCAAAATAATTGTTCtggttggtcaaaagaccaattggtGGCAAAAGATCATAATTGGGCtgtctgtgtaaatgcagcctttgTTGGGTTCTAGGTGTCAGGaactctggtctaatgtagagcTACAAGTTAATATAACAGGTATTTAATaaacaggctacattatacaggttGATATAACAGGTATTTAATAGTCCTGATATTTCtgactatactgtatatagaaccACGTCAGTCTTCCATCCTAGATTTAAGGAAGTGGAAGGACATGATTAATTGCAGACTATAACAAAAATGGTTTTTAGGGTTTTATTCCACTAATGGCTGAGTTTAGGATTAGGGGAGggcaagctgatcctagatcggcTGAGGTTAAGATTAGGGGAGGGCAAgctgatctgtacctaggggaagctTCAACCCAGAGCCATAAAAGGCAACATTGCCGCAGGATAGCCTGTTTACTGGGCCAGAGGTCCTACATCTTTGACATGGCACAAGGACTGCTTTCCTAATAACTGGTTTCTATAGAAGGGGATGGGGGGTGTTTTACGTTCATGCCATTTAGGGCAACAATCTCTCACTGTATTTATTTCAAATAAAGGAATTTGATGTTTTCATTATTGGTGAAAATTAATGACAGCTACTCAGAAATGCCTTAGGTTTTCAAAGCACAATTATGTCTCATTCACTTTCTATATTCTTGTCAAATGATGAACTATTACTCAGGCAACACAACGATGTGTTTGACTGTGTTGCCATTTTGTCCCTGGTGGATATCCATTCACTGTTTCTTATTAAAATATCTGCTATATTTACAA
>XM_036982430.1
aacacacacttttacactcataaTTTGCTGCTGGtgctctgttctttattttattcttattatcgatcctgatgtctagtcactttaccctgccttcgtgtacatatctacctcagaTACCCCGTACCTCTTCatgttgatctgAAGATAGGCTACTTGCACGGCGAGCTGACACTTCCTCCAGCTTTGGCAACATCCGGATTCCAGTCGAGATGGTCATGGCGGAGGGTGCAGCTGTTATGAGGAGGAATCGACCAGGGACTAAAGAAAAGGACTTCTACAACTGGCCCGATGAGTCATTCGAGGAGATGGACAGCACACTGGCTGTGCAGCAGTACATCCAACAGAACATCCGTACAGACTGCTCCAACATGGACAAGATCCTGGAGCCCCCAGAGGGTCAGGATGAGGGGGTCTGGAAGTACGAACACCTCAGGCAGTTCTGTTTGGAGCTGAACGGACTTGCTGTGAAACTACAGGGAGAATGCCACCCAGACACATGCACCCAGATGACGGCAACAGAGCAGTGGATCTTCCTCTGTGCTGCACACAAGACTCCCAAAGAGTGTCCAGCCATCGACTACACCAGACACACTCTGGACGGAGCTGCCTGCCTCCTCAACAGTAACAAGTACTTCCCTAGCAGAGTGAGCATTAAAGAGTCCTCAGTAGGGAAACTGGGTTCAGTTTGCCGGCGGATCTACAGGATATTCTCCCACGCTTACTTCCACCATCGTCAGATCTTTGACAAGTATGAGAACGAGACGTTCCTGTGCCATCGGTTCACGCGCTTCGTGATGAAGTACAACCTGATGTCCAAGGACAACCTGATCGTACCCATCATGGAGGATGAGACTAACCCTAACGAAGCAGAGGGCGAGAGCGACGCCTGAGGACTAGGGATCTGAAGAGGATCTGCTACACCCTGCCAAACTATTTCAAACACATGGCTGtctcacacacccacccacaaccACACAATACACTAAAGTACACTAAAATCACCAGTTTTTAAGTAGAATATTTTCAATATTGTATGAACATCCTAATTTAGCTTGTATGTTTCAGAGAACAAGACAATGTTGTGGTTAAATGACTAACCAATATACACTGTGGCCAGTtaattaggtacacccatctagttcCGGGTCAAACCCTGCTTTGCCACCAAAACAGCCTGTCGGAAACGTTCCACATGGATGTCGGTCCATGCAGACGGGATGGCATCACGCTGTAGCTGCAGATTGGACGGCGGGGACATTGATACTGCAAACAGCCCGGTCTACCTCATCCCAAAGATGCTCTCTATTGGGTTTGGTCAGCAACAATGTTCAGATACGCTGTGACGTTCGATCGTTGCtaaattggtatcaagggacctaacgtgtgccaggaaaacgttccccacaccagtacaccaccgccaccagcctgtaccgttgacaccaggtaGGATGGGTAAACgcactcatgctgcttacgccaaaacCTGACTCTGTCATCAGCATGAACCGGGAAacgggattcatcagaccaggcaaGGTTTTTCCACTCCTGATTGTCCAGTGTTGGTAATTGCGTTCCCACTAGTGCTTCTTCTTagttttagctgataggagtggaaccccgTGTGGTCGTCTGCTACAGTAGCCCATCCTTGACAAGgatcgacgagttgtgcgttctgaaatgccgttctgcacaccactgttgtactgtgccGTTAGTGGccagcctgttagcttgcacgattcttgccattctccttcgacctctcatcaacgagctgttttcacccacagaactgccactgactggatgttttttgtttgtcgcaccattcacAGTAAACTCTAGACATTCGTGCGTGAAAATCCCAGGAAGCCGGCTCTTTCAGAGATATTGGATCCGGTGTTCCTAGCAGACGATAACCACGCTCAAAGTCACTTAGGCCGCTAGTTTGACACATTCTAGCATTCAATCAAACAGTTACTGAATGGCTCGATGCCTGTCAGCCTACTTTATAGAGCAAGCCacagccacgtgactcactgtaggAGCAAATCATTttggtgaacagggtggtgtaccTGATAAACTGTGACACCCTTTGCTAGTTACTTTATCATGTGCTTTCTGTTTGGTCCTTGGGCAGCGTTTACACAGGCAACCAAATTCTTATGGGCAAAATAATTGTTCtggttggtcaaaagaccaattggtGGCAAAAGATCATAATTGGGCtgtctgtgtaaatgcagcctttgTTGGGTTCTAGGTGTCAGGaactctggtctaatgtagagcTACAAGTTAATATAACAGGTATTTAATaaacaggctacattatacaggttGATATAACAGGTATTTAATAGTCCTGATATTTCtgactatactgtatatagaaccACGTCAGTCTTCCATCCTAGATTTAAGGAAGTGGAAGGACATGATTAATTGCAGACTATAACAAAAATGGTTTTTAGGGTTTTATTCCACTAATGGCTGAGTTTAGGATTAGGGGAGggcaagctgatcctagatcggcTGAGGTTAAGATTAGGGGAGGGCAAgctgatctgtacctaggggaagctTCAACCCAGAGCCATAAAAGGCAACATTGCCGCAGGATAGCCTGTTTACTGGGCCAGAGGTCCTACATCTTTGACATGGCACAAGGACTGCTTTCCTAATAACTGGTTTCTATAGAAGGGGATGGGGGGTGTTTTACGTTCATGCCATTTAGGGCAACAATCTCTCACTGTATTTATTTCAAATAAAGGAATTTGATGTTTTCATTATTGGTGAAAATTAATGACAGCTACTCAGAAATGCCTTAGGTTTTCAAAGCACAATTATGTCTCATTCACTTTCTATATTCTTGTCAAATGATGAACTATTACTCAGGCAACACAACGATGTGTTTGACTGTGTTGCCATTTTGTCCCTGGTGGATATCCATTCACTGTTTCTTATTAAAATATCTGCTATATTTACAA
>XM_036982431.1
cacacacttttacactcataaTTTGCTGCTGGtgctctgttctttattttattcttattatcgatcctgatgtctagtcactttaccctgccttcgtgtacatatctacctcagaTACCCCGTACCTCTTCatgttgatctgATAGGCTACTTGCACGGCGAGCTGACACTTCCTCCAGCTTTGGCAACATCCGGATTCCAGTCGAGATGGTCATGGCGGAGGGTGCAGCTGTTATGAGGAGGAATCGACCAGGGACTAAAGAAAAGGACTTCTACAACTGGCCCGATGAGTCATTCGAGGAGATGGACAGCACACTGGCTGTGCAGCAGTACATCCAACAGAACATCCGTACAGACTGCTCCAACATGGACAAGATCCTGGAGCCCCCAGAGGGTCAGGATGAGGGGGTCTGGAAGTACGAACACCTCAGGCAGTTCTGTTTGGAGCTGAACGGACTTGCTGTGAAACTACAGGGAGAATGCCACCCAGACACATGCACCCAGATGACGGCAACAGAGCAGTGGATCTTCCTCTGTGCTGCACACAAGACTCCCAAAGAGTGTCCAGCCATCGACTACACCAGACACACTCTGGACGGAGCTGCCTGCCTCCTCAACAGTAACAAGTACTTCCCTAGCAGAGTGAGCATTAAAGAGTCCTCAGTAGGGAAACTGGGTTCAGTTTGCCGGCGGATCTACAGGATATTCTCCCACGCTTACTTCCACCATCGTCAGATCTTTGACAAGTATGAGAACGAGACGTTCCTGTGCCATCGGTTCACGCGCTTCGTGATGAAGTACAACCTGATGTCCAAGGACAACCTGATCGTACCCATCATGGAGGATGAGACTAACCCTAACGAAGCAGAGGGCGAGAGCGACGCCTGAGGACTAGGGATCTGAAGAGGATCTGCTACACCCTGCCAAACTATTTCAAACACATGGCTGtctcacacacccacccacaaccACACAATACACTAAAGTACACTAAAATCACCAGTTTTTAAGTAGAATATTTTCAATATTGTATGAACATCCTAATTTAGCTTGTATGTTTCAGAGAACAAGACAATGTTGTGGTTAAATGACTAACCAATATACACTGTGGCCAGTtaattaggtacacccatctagttcCGGGTCAAACCCTGCTTTGCCACCAAAACAGCCTGTCGGAAACGTTCCACATGGATGTCGGTCCATGCAGACGGGATGGCATCACGCTGTAGCTGCAGATTGGACGGCGGGGACATTGATACTGCAAACAGCCCGGTCTACCTCATCCCAAAGATGCTCTCTATTGGGTTTGGTCAGCAACAATGTTCAGATACGCTGTGACGTTCGATCGTTGCtaaattggtatcaagggacctaacgtgtgccaggaaaacgttccccacaccagtacaccaccgccaccagcctgtaccgttgacaccaggtaGGATGGGTAAACgcactcatgctgcttacgccaaaacCTGACTCTGTCATCAGCATGAACCGGGAAacgggattcatcagaccaggcaaGGTTTTTCCACTCCTGATTGTCCAGTGTTGGTAATTGCGTTCCCACTAGTGCTTCTTCTTagttttagctgataggagtggaaccccgTGTGGTCGTCTGCTACAGTAGCCCATCCTTGACAAGgatcgacgagttgtgcgttctgaaatgccgttctgcacaccactgttgtactgtgccGTTAGTGGccagcctgttagcttgcacgattcttgccattctccttcgacctctcatcaacgagctgttttcacccacagaactgccactgactggatgttttttgtttgtcgcaccattcacAGTAAACTCTAGACATTCGTGCGTGAAAATCCCAGGAAGCCGGCTCTTTCAGAGATATTGGATCCGGTGTTCCTAGCAGACGATAACCACGCTCAAAGTCACTTAGGCCGCTAGTTTGACACATTCTAGCATTCAATCAAACAGTTACTGAATGGCTCGATGCCTGTCAGCCTACTTTATAGAGCAAGCCacagccacgtgactcactgtaggAGCAAATCATTttggtgaacagggtggtgtaccTGATAAACTGTGACACCCTTTGCTAGTTACTTTATCATGTGCTTTCTGTTTGGTCCTTGGGCAGCGTTTACACAGGCAACCAAATTCTTATGGGCAAAATAATTGTTCtggttggtcaaaagaccaattggtGGCAAAAGATCATAATTGGGCtgtctgtgtaaatgcagcctttgTTGGGTTCTAGGTGTCAGGaactctggtctaatgtagagcTACAAGTTAATATAACAGGTATTTAATaaacaggctacattatacaggttGATATAACAGGTATTTAATAGTCCTGATATTTCtgactatactgtatatagaaccACGTCAGTCTTCCATCCTAGATTTAAGGAAGTGGAAGGACATGATTAATTGCAGACTATAACAAAAATGGTTTTTAGGGTTTTATTCCACTAATGGCTGAGTTTAGGATTAGGGGAGggcaagctgatcctagatcggcTGAGGTTAAGATTAGGGGAGGGCAAgctgatctgtacctaggggaagctTCAACCCAGAGCCATAAAAGGCAACATTGCCGCAGGATAGCCTGTTTACTGGGCCAGAGGTCCTACATCTTTGACATGGCACAAGGACTGCTTTCCTAATAACTGGTTTCTATAGAAGGGGATGGGGGGTGTTTTACGTTCATGCCATTTAGGGCAACAATCTCTCACTGTATTTATTTCAAATAAAGGAATTTGATGTTTTCATTATTGGTGAAAATTAATGACAGCTACTCAGAAATGCCTTAGGTTTTCAAAGCACAATTATGTCTCATTCACTTTCTATATTCTTGTCAAATGATGAACTATTACTCAGGCAACACAACGATGTGTTTGACTGTGTTGCCATTTTGTCCCTGGTGGATATCCATTCACTGTTTCTTATTAAAATATCTGCTATATTTACAA

Function

NR:

description
MOB-like protein phocein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036982429.1 False 3070 mRNA 0.46 9 8620663 8626882
XM_036982430.1 False 3005 mRNA 0.46 9 8620663 8626882
XM_036982431.1 True 3000 mRNA 0.46 9 8620665 8626882

Neighbor

gene id symbol gene type direction distance location
LOC110527268 LOC106575873 coding upstream 10800 8608684 ~ 8609863 (+)
LOC110527267 LOC106575871 coding upstream 22323 8597362 ~ 8598340 (+)
LOC118965341 LOC106575870 coding upstream 27801 8590381 ~ 8592862 (+)
LOC110496917 LOC106595105 coding upstream 33949 8585033 ~ 8586714 (+)
LOC110495575 LOC106598167 coding upstream 42624 8576739 ~ 8578039 (+)
LOC118965237 LOC106574888 coding downstream 261130 8888012 ~ 8890717 (+)
LOC110512356 LOC106575836 coding downstream 283809 8910691 ~ 8912800 (+)
LOC110527273 LOC106574813 coding downstream 527055 9153937 ~ 9159959 (+)
LOC110515808 LOC106575810 coding downstream 558393 9185275 ~ 9664625 (+)
LOC118965238 LOC106575811 coding downstream 1037800 9664682 ~ 9669888 (+)
G572262 NA non-coding upstream 4909 8615524 ~ 8615754 (+)
G572260 NA non-coding upstream 6239 8614187 ~ 8614424 (+)
G572256 NA non-coding upstream 9184 8611262 ~ 8611479 (+)
G572255 NA non-coding upstream 9965 8610311 ~ 8610698 (+)
G572253 NA non-coding upstream 14940 8604855 ~ 8605723 (+)
G572303 NA non-coding downstream 12506 8639388 ~ 8639656 (+)
G572309 NA non-coding downstream 17669 8644551 ~ 8645976 (+)
G572311 NA non-coding downstream 19542 8646424 ~ 8647117 (+)
G572322 NA non-coding downstream 30718 8657600 ~ 8658430 (+)
G572337 NA non-coding downstream 48386 8675268 ~ 8675484 (+)
G570834 NA other upstream 479901 8140282 ~ 8140762 (+)
G570875 NA other upstream 534910 8084271 ~ 8085753 (+)
G570868 NA other upstream 541323 8077745 ~ 8079340 (+)
G570827 LOC107379067 other upstream 549105 8063107 ~ 8071558 (+)
LOC110497026 ptprn other upstream 566932 8009587 ~ 8061480 (+)
G572315 NA other downstream 23098 8649980 ~ 8650898 (+)
G572476 NA other downstream 295453 8922335 ~ 8922794 (+)
G572449 NA other downstream 303227 8930109 ~ 8933878 (+)
LOC110497049 LOC106575743 other downstream 1339785 9879599 ~ 9980430 (+)
G573366 NA other downstream 1501239 10128121 ~ 10132016 (+)

Expression


Co-expression Network