LOC110512356 (LOC106575836)


Basic Information

Item Value
gene id LOC110512356
gene name LOC106575836
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 8910691 ~ 8912800 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036982450.1
CGAGAATATAGATTTTTCCACTTCCTCATAAGAAATCGTTCAGCGAGGTATGAATTTCAAGCTTACTAAaagttacatattatattacatttcCATGGTCTTCTTTTGACTATGGCGCTTGTACCATATGATGGGAATTATTTGCCCGTGCTCTCAAAACTACATAATTCGTCTGCCGAGTTCCATTTTGCTGACCACAATGTCAGACTAACTCAGGACTGGAATAAACTCGGAGTAGCTGCTGTCGTCTGGGATGCAGCGGTAGTGATGTGTATGTACCTGGAGCTGGGGCAGGTCGAGCTGACAGGGAAGGTTGCCATCGAGCTGGGGGCAGGCACTGGACTGGTGGGCATCGTGGCAGCTCTTCTAGGTGCCAAAAAAGTGACCATCACAGACCGTGAGCCTGCCTTGGGCTTCCTTGCAGCCAATGTGAAAGAGAACATTCCCCCGGATCGGCTAGGAGCAGTGAAGGTCTCAGAACTGACCTGGGGCCAGGGATTGGAGCGCTATCCCACAGGAGGCTTTGACATAGTGCTGGGAGCAGACATTGTTTACCTGGAAGACACATTTCCATCATTACTGCAAACGATGGAGCACCTCAGCTCAGAGAGTAGTGTAGTGCTACTGGCCTGCAAGATCCGCTACGAGCGAGACACTAACTTCCTGAGCATGCTGAACCAGCGCTTCACAGTACACGAGGTGCACTATGACAAGGAAAGAGACATTCACATCTACAAGGCTGTGAAGCTTCCAGCAAGGAGAGATCTGTAGGAACCAGTGACTGATGGGGGATGTGAGGGGTTTGAATCACAGTGGATGGATCAATGTGCTGTCAATCATTGATGGTTCAGGGAGCTACTACTCATGAATGGACAGTCAGTGAGATGGGTTCATGGAGGATGGTTTTGTTTCATGCAGGGTTGTGTCCAGTAGGGAGAAAATATGGAGCTACAACCCAGCTACTATGGGTGATTGTAATTGTCTTAATTTCATTCATCCTTTTTTGATAAAATGGATTTGAAAACAAATTAAGACATGTGAAAAATAATACCAGAAACACATTTATTAACAGCTGCCAAAAACAAATAGTAGAATCTGTAATATAATTGTTTTGCTTTTTTCATACAAGTGAATGCTGACATTAAGAAATACAACGTTTACAAAATA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K21804 METTL21A; protein N-lysine methyltransferase METTL21A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036982450.1 True 1167 mRNA 0.45 3 8910691 8912800

Neighbor

gene id symbol gene type direction distance location
LOC118965237 LOC106574888 coding upstream 19974 8888012 ~ 8890717 (+)
LOC110527270 LOC106574807 coding upstream 283809 8620663 ~ 8626882 (+)
LOC110527268 LOC106575873 coding upstream 300828 8608684 ~ 8609863 (+)
LOC110527267 LOC106575871 coding upstream 312351 8597362 ~ 8598340 (+)
LOC118965341 LOC106575870 coding upstream 317829 8590381 ~ 8592862 (+)
LOC110527273 LOC106574813 coding downstream 241137 9153937 ~ 9159959 (+)
LOC110515808 LOC106575810 coding downstream 272475 9185275 ~ 9664625 (+)
LOC118965238 LOC106575811 coding downstream 751882 9664682 ~ 9669888 (+)
LOC110527090 LOC106575822 coding downstream 832541 9745341 ~ 9758984 (+)
LOC100135948 LOC100194643 coding downstream 850402 9763202 ~ 9769681 (+)
G572473 NA non-coding upstream 1991 8908085 ~ 8908700 (+)
G572472 NA non-coding upstream 5498 8904600 ~ 8905193 (+)
G572470 NA non-coding upstream 7200 8902857 ~ 8903491 (+)
G572465 NA non-coding upstream 32644 8877847 ~ 8878047 (+)
G572475 NA non-coding downstream 5978 8918778 ~ 8919645 (+)
G572567 NA non-coding downstream 107091 9019891 ~ 9020138 (+)
G572604 NA non-coding downstream 154746 9067546 ~ 9067895 (+)
G572610 NA non-coding downstream 162644 9075444 ~ 9075890 (+)
G572615 NA non-coding downstream 181101 9093901 ~ 9112416 (+)
G572315 NA other upstream 259793 8649980 ~ 8650898 (+)
G570834 NA other upstream 769929 8140282 ~ 8140762 (+)
G570875 NA other upstream 824938 8084271 ~ 8085753 (+)
G570868 NA other upstream 831351 8077745 ~ 8079340 (+)
G570827 LOC107379067 other upstream 839133 8063107 ~ 8071558 (+)
G572476 NA other downstream 9535 8922335 ~ 8922794 (+)
G572449 NA other downstream 17309 8930109 ~ 8933878 (+)
LOC110497049 LOC106575743 other downstream 1053867 9879599 ~ 9980430 (+)
G573366 NA other downstream 1215321 10128121 ~ 10132016 (+)
LOC110527289 LOC106590510 other downstream 1266619 10173615 ~ 10233047 (+)

Expression


Co-expression Network