LOC110527273 (LOC106574813)


Basic Information

Item Value
gene id LOC110527273
gene name LOC106574813
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 9153937 ~ 9159959 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036982452.1
GGATTTTCCACAGTATTTCTTATACCAGTTATATTTCCTTTGAAATTAGcaaagggaagtgaacaagtgcacactttgggaggaaggagggatcaTTTGGGACGAAGCCCTGGTGGTTAATTAACAACCTCTGTGTCTGATGTTAGTGTCCCAGAGGTAGTCAGTGTcctcagatctctctctctcattctgactCAGCACGGCAACAGCACGGCAACAGCACGGCAACAGCACGGCAACAGCACGGCAACATGGCTCACCGTCGCTTTGAGGGCAAAGAGCACGCAGCCTCCTACCTGAGGTACAGGGTGTCCCCCCCACAGGAGCTGATCACAGAAATACTGGCATTTCTGGAGAATATGAAAGGAACGCCGTTCGACCTTGCCGTGGACGTAGGCTGTGGCTCGGGACAGGGGACACTCCTACTGGCCCCTCACTTTACCCAGGTGATTGGGACAGACATCAGCCCCGCCCAGCTGGAGGTGGCTCTGGCCAATAGCAGCGCCCCAAATATCTTCTACAGGCAGTGTCCTGCAGAGGAGTTACCGTTCGCTGACGGCGAGGTAGACTTGGTGACGTCCATGACTGCGGCACAGTGGTTCCACCGACCACGGTTCCTCCAGGAGGCAGACAGGCTGCTGAAGCCCAGAGGGTGTCTGGCCCTGATCagttataccctggacatggaCCTGGAGTACGGACACCACTCCCACACCCTGACTGACATCTGTCATCAGTTCTACAAGAACCTGCTGCCATTTCGCAGTGCCCACATAGGTACTACCACGGTCCCTCTCTACAAACAGATGTATGACTCATGCCCGTACCCAGACAAAGAGTGGCATGAGTGTCTGCGGATGAGGAGACCAATGCCTCTGAGTAGCTACATCGGCATGGTGGAGACCTTCTCTAGCTATCGGGCGTTTCTGAAGCAGGATCCAGTGGAAGCCCACAGGTTCTCCCAGGACTTCAGGAACAGGTTGCTGTCTGAGATGGGGGAGTCGAATCCAGACACAGAGATCACAGTGGTGGTGAAGTATTTCTACTGGCTGGCCTACAAACCTGCTGCAGCCTGATCTGGGGCAAAGACGCAGCAAACCCCACAGACTCTTCCCTTGATGTTTTCTGTTGCATCTAATGGCAAAATGACATAACTAAAAGACAAGACAACAAATAAGACCACGAGTTACATACAACTTAAATCATTAGTCCATCAAAGTCAAAATGAAAAGTGAACCCACATGAACTCCAATACCACCTAAAGAAGATGTTTACGATGTTTCAGAATAGTCTGGATACCCGATGAGCTCAACCATTTCTTGTTTTATAAAGAAACAGCTTGTTAAAATACAA

Function

NR:

description
putative methyltransferase DDB_G0268948 isoform X1

GO:

id name namespace
GO:0032259 methylation biological_process
GO:0008168 methyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036982452.1 True 1353 mRNA 0.51 6 9153937 9159959

Neighbor

gene id symbol gene type direction distance location
LOC110512356 LOC106575836 coding upstream 241137 8910691 ~ 8912800 (+)
LOC118965237 LOC106574888 coding upstream 263220 8888012 ~ 8890717 (+)
LOC110527270 LOC106574807 coding upstream 527055 8620663 ~ 8626882 (+)
LOC110527268 LOC106575873 coding upstream 544074 8608684 ~ 8609863 (+)
LOC110527267 LOC106575871 coding upstream 555597 8597362 ~ 8598340 (+)
LOC110515808 LOC106575810 coding downstream 25316 9185275 ~ 9664625 (+)
LOC118965238 LOC106575811 coding downstream 504723 9664682 ~ 9669888 (+)
LOC110527090 LOC106575822 coding downstream 585382 9745341 ~ 9758984 (+)
LOC100135948 LOC100194643 coding downstream 603243 9763202 ~ 9769681 (+)
LOC110528748 acadl coding downstream 616080 9776039 ~ 9781629 (+)
G572621 NA non-coding upstream 8337 9144290 ~ 9145600 (+)
G572615 NA non-coding upstream 41521 9093901 ~ 9112416 (+)
G572614 NA non-coding upstream 41906 9107404 ~ 9112031 (+)
G572610 NA non-coding upstream 78047 9075444 ~ 9075890 (+)
G572604 NA non-coding upstream 86042 9067546 ~ 9067895 (+)
G572646 NA non-coding downstream 4334 9164293 ~ 9164552 (+)
G572651 NA non-coding downstream 22380 9182339 ~ 9182683 (+)
G572653 NA non-coding downstream 28767 9188726 ~ 9190294 (+)
G572702 NA non-coding downstream 148420 9308379 ~ 9309804 (+)
G572710 NA non-coding downstream 178368 9338327 ~ 9339018 (+)
G572449 NA other upstream 220059 8930109 ~ 8933878 (+)
G572476 NA other upstream 231143 8922335 ~ 8922794 (+)
G572315 NA other upstream 503039 8649980 ~ 8650898 (+)
G570834 NA other upstream 1013175 8140282 ~ 8140762 (+)
G570875 NA other upstream 1068184 8084271 ~ 8085753 (+)
LOC110497049 LOC106575743 other downstream 806708 9879599 ~ 9980430 (+)
G573366 NA other downstream 968162 10128121 ~ 10132016 (+)
LOC110527289 LOC106590510 other downstream 1019460 10173615 ~ 10233047 (+)
G574038 NA other downstream 1716148 10876107 ~ 10877184 (+)
G574122 NA other downstream 1843545 11003504 ~ 11076001 (+)

Expression


Co-expression Network