LOC110528845 (LOC100194500)


Basic Information

Item Value
gene id LOC110528845
gene name LOC100194500
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 12179637 ~ 12187373 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021611004.2
CCTCCCCCATCAACGTCGTTTGACATATACCCATCGTTACAGGATTCGCCTCTGGCAGTTTTTAAAAAGGCAAGCTCAAAGCCAcatattatactgtatgtgtagaaAACGTGCGGGGAGGACAGCCTACAGAGATTGGTTATTCTACAAGACAATCCCTGCTTTCTTCTTCTTAATTTGGAGACAATTGATGTGCATGCGTAAAACGACAATTGAAAGCCCAAAAGGAGAAGACTCGGGTTATTTCGCGGTGGACAATCTAAACTCGAATATAAATGGACATTTGACACAATAAAGACAGAGTGGGTGAAGAGTGGAACCTTAGCATTTGATACAGTGATTGAGGGACTTTTACGCACGCAGGCAGTGGCCACCTGTGGATGGTGATTCTTTCAAGGACTTTTGCCCCAAAACCCCGATGATCGAAAGCATTGCAAGCGTTCCATGCAGTACACATTGTAGTTGATTATAGTTGTTGTATGTTTGTAATCGTTTTCATTTGAAACAATATGCTGATTAGTTTTTCACTCCTGGCAACGCTTCTCCTAAGCGAGTCGGGTTGTTTGGGCTCGTTCGTACCGTGCGAACCGTGTGACCAGAAGGTTATGTCGATGTGTCCGCCAGTGCCGGTGGGATGCCAGCTGGTGAAGGAGCCTGGCTGTGGTTGCTGCCTGACTTGCGCGCTCCCCGAGGGACAGTCGTGCGGGGTGTACACGGGGACTTGCACGCACGGGCTCCGATGCCTGCCGAAGAGCGGGGAGGAGAAACCGCTGCACGCGCTCCTCCACGGGAGAGGAGTGTGCGCAAACGAGAAGATGTACAAGCCGCTGCATCCAGGCACGGATGGTTATTCTCCAGAGGAAGCTATGTTAGCAGAGGTTCCAGAGTCCCTGCTGCCCCAGGCCAAGGTGCCTCTGTACGGGGGCAGAGACCACATCAGCAGCCGCAAGGCTCAGGCCATGAGACAGGCTAAAGACCGCAAGAGACAGCAGGCTAAGCTCCACTCTGTCAGCAGCCTTGACTACTCAACCCTCGCCCTGGACAAACTGCAGCCTGAGTTTGGACCCTGCAGGAGAAAGCTGGACGGGATCATTCAGAGGATGAAAAACACATCTAGAGTCCTAGCTCTGTCCCTATACCTTCCCAACTGTGACAAGAAGGGATTCTTCAAGCACAAGCAGTGTAAACCATCACGTGGGCGGAAGCGGGGGATCTGTTGGTGTGTGGACCGTTTTGGCGTGCAGCTCCCTGGCACGGACTACAGTGGAGTGGACATCCAGTGCAAAAACCCGGAGAGCAACAGCAACAAAAACGAATGAGAGATGGCCAATTTGGTCACCTGACATGAGCCAAGGCCCGCCTCCCTTTACCCCTACTCCTGCAAATCACATGTACATGCAAAATATGCAAAAGCCAATCAAATCAGGAAAGCAGAGcacagatacagtacatacacatggTTTTAAACTATACATCTACCTATACTGAGATGACCTATAACCTCCCTTTGAAGCACATATAACAATGTTCTCTGATTTAAATTATATCAGATTCTGTTTAAACAAAATGTTAAGGCTAAAGAGTAAAGCTCATCTTTTTCACCTACTGTATGTTGTTATCGTGATGTTGACAGGAACTCTTTACTGGGGAGCACAGTAATCTGGGGTCGTATTTAAACGTAACTCTGTTCTTTTGGTCCAAATGTTTGTCCCTTCAGAGCACTTCTCCTACAAGAGAACCTCAGTGACTGAAAGTACTTTATTGTCTGAGTTTGGGTCTATGTCCTTATATGTCTTTCTGAGTGCGATGAGATGAGCTTTTTTCCAGTCCTGCCTTTCTTCCACTTTGTCTCCCAGATTGTTCTGAGTTGAGGGTCTTAAGAACTAGTAACTGCTCGTATACAGTAGGTTGTTACAGAGTAGTTACAGTAGCTATCTTAATAAACCCATCAACTGCTACTTCTGATGGGTTGTGTCTCGATATAGTTTCATAGGGGTGACTGTAtgaaatgactgtgtgtgtgtgtgtgtgtgcctcctaGACTTTCTCCTTTAGTAGTCTGTATTGTGCCTTACCTTCCGTGAAGTATATAAAAAAGATCACCTCAAAAACACATCATGACAGTCATTTGCTTGTTTTGTCGTTTATAAACGACAGCCAAGAAAGTACAGGTGCTTTGAAAAGTCCAACACAGGCTCAAATCGCATGCAAATGCTGCACAGCGTTTCTATTGACTTCTCGTAGCTTCCTGTCTGACCACAACACAGTCTAGGACTCTACTGTATGACCCCTGGAAAGGTGTGGCTCTTTGGGCTTCTATGGACATCTCagtgccttctctctctctctctctctcatgacttTGAATCCAGATTTACATCCAGATGATCAGGCCTTGTCGTTGAACGAGGACATTTTAGCAGTATGTGGATGTGGAGATCGGTCACGGAAGGCCGTGATGATACTTTTTGATCCTACGTCCCGTTTGTGAACATGTTAAATCAGACGTCAACTGATTTTACTGAAGCTCAAAACATTTGCCAGATATTTTGTTGACATTCCTTGAAATAGACATCCCTTTTTTCAGGGTATGGTAACATGCCGATAGCTTTGACAGGGGCTATGTGTACAGCCTATGCCTGCCACTAGAATGCATAGGAGACTTGGAAAGGTTTCTCAACTCAGTCTTAAGCTTGCTTGTATGAAAGACCATGAAATCTCATTCCATATTCGTGATAAAAAAGCATGTAGGAAACTAATAGGTAACAGTTTACTCAAAGCCAAAAATTGCTGCAATTTACTAACAGGCTGAAAATAGCTGTTTAGTCAGGGTCCATCAGAGACGATGGTAAGACATTATAACAGGGTCATACATGCTTATGACAATTCTTACAATGCAATAATGCAATACCTGTTGGCTTTAAGTGAAGTGTTACTAACAAATCTATTTATTCACTGTGTAATTGATATATTTTAACCTTGTCATTTTTGTAACGACAAAGCATTTATTTAAATAAAGTTATGTATTGATGTA

Function

NR:

description
insulin-like growth factor binding protein 5 paralog A

GO:

id name namespace
GO:0001558 regulation of cell growth biological_process
GO:0005576 extracellular region cellular_component
GO:0005520 insulin-like growth factor binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021611004.2 True 3034 mRNA 0.45 4 12179637 12187373

Neighbor

gene id symbol gene type direction distance location
LOC110528828 tns1 coding upstream 61245 11861168 ~ 12118392 (+)
LOC110497002 il8r coding upstream 343467 11826502 ~ 11836170 (+)
LOC118965247 LOC106575639 coding upstream 402974 11774462 ~ 11776663 (+)
LOC110495473 LOC106575640 coding upstream 415253 11756731 ~ 11764384 (+)
LOC110495474 LOC106573985 coding upstream 429326 11743954 ~ 11750311 (+)
LOC110528831 LOC106574695 coding downstream 25765 12213138 ~ 12256113 (+)
LOC110528835 LOC106575602 coding downstream 72571 12259944 ~ 12275532 (+)
LOC110528723 LOC106592612 coding downstream 100215 12287588 ~ 12352864 (+)
LOC110528846 LOC106574744 coding downstream 166475 12353848 ~ 12364044 (+)
LOC110528829 LOC106574706 coding downstream 213243 12400616 ~ 12474139 (+)
G575232 NA non-coding upstream 59852 12118873 ~ 12119785 (+)
G575134 NA non-coding upstream 106863 11997304 ~ 12072774 (+)
G575184 NA non-coding upstream 189170 11990143 ~ 11990467 (+)
G575166 NA non-coding upstream 211828 11957347 ~ 11967809 (+)
G575163 NA non-coding upstream 232635 11946799 ~ 11947002 (+)
G575265 NA non-coding downstream 535 12187908 ~ 12191247 (+)
G575275 NA non-coding downstream 17958 12205331 ~ 12205530 (+)
G575276 NA non-coding downstream 18220 12205593 ~ 12205805 (+)
G575268 NA non-coding downstream 25359 12212732 ~ 12212997 (+)
LOC118965246 LOC106574739 other upstream 681721 11496553 ~ 11498867 (+)
G574754 NA other upstream 691133 11485253 ~ 11488504 (+)
G574348 NA other upstream 829784 11349349 ~ 11349853 (+)
G575758 NA other downstream 354644 12542017 ~ 12542481 (+)
G576160 NA other downstream 985411 13172784 ~ 13173074 (+)
G576161 NA other downstream 985939 13173312 ~ 13207489 (+)
G576241 LOC106575516 other downstream 1299143 13486516 ~ 13489737 (+)

Expression


Co-expression Network