LOC110528896 (LOC106595470)


Basic Information

Item Value
gene id LOC110528896
gene name LOC106595470
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 15457306 ~ 15472882 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036982716.1
AGACAGCTAAACAAGTGAAAACAGAACATCTTCTAAATCAATGTACAGACAGAGACAAGCTACCGAACACACGGTTTAAAACCCCGCTCACCCGGCGCGGAAACTAAATCGAGCGTACCGTTCTGTCTGGGCTTGGTCTGTGGTTCGTTCCGTTTCCGCCCTGTCATCCTGGCTTTTCTCCGGTCCTCGGAGCCCAATTCCAGAAGAGGACAGCTAAACAAGTGAAAACTGTTTATTAGCTAAACTGACTACAGTCTATTAGCTCAAATCTTAAGTAAATCACAGCGCCAGATCGGTGTACCGCGGagacaaagagaggaggaggggcggGGTTTCAGGAGTTTTACATGAGACGAGATATTGCTTCCTAGTTAAGCTTACTGgtgtgtgtgtgtgtgtagatgtgtgacaGCGGTGTGTGTGAAGACAAGCCCCCCGCCCCCCCTGTCAGAATGAACAGCCAAGGAGGCGGAGCCAAGGACTCCGTGTCGGGCAACTACAACTCTCGGTCCCTCCCCTCTGTTCCTGAGGAGAAACAGAAACGAAATAAAATCATCTCCATGTTCGCCTCCGagaaaggaggcAGGAAGAAGGATCGTGATAAGGACAACAGACCAGAGATCTCCTCTCCGTCAGACTTTGAACACACCATCCATGTGGGCTTCGACGCCGTCACAGGAGAGTTCACAggcatgCCGGAGCAGTGGTCCAACCTGCTCCAGACATCTAACATCAGTAAATCGGAGCAGAAGCAGAATCCTCAGGCTGTTCTGGACATTCTCAAGTTCTACGACTCCTCCACcgcaaaacagaaatacctctcCTTCTCAGAAAAAGATGCACAGTCGcctGGAAAGCAGGGTGCCACGTCCTCGCCATCCGGCGGTAAAGACGGTgaagatgatgacgatgatggaGACGAAGCTCCGCCCCCTATTGTGGCGCCACGGCCTGAGCACACCAAATCAgtgtACACCAAGTCTGTCATCGACCCACTTCCTCCGCTGCCAGAGCCTGACTCCGCCTCCAACAGGAACAAGAAGAAACAGCAGGGCAAGATGACTGACGAGGAAATCATGGAGAAACTACGAACCATCGTCAGTATTGGAGATCCCAAGAAGAAGTACACACGCTATGAGAAGATCGGCCagggaGCGTCTGGTACTGTCTACACAGCCATCGATGTTGCCACTGGTGCAGAGgtaGCTATCAAACAGATCAACCTCCAGAAACAGCCGAAGAAGGAGCTGATCATCAACGAGATCCTGGTGATGAAGGAGTTACAACAACCTAACATCGTCAACTACgtagacagtttccTGGTAGGTGAGGAGTTGTTTGTGGTGATGGAGTATCTGGCTGGAGGTTCACTCACGGACGTTGTCACGGAAACATGCATGGACGAGGCTCAGATCGCTGCTGTGTGcagagagTGTCTGCAGGCTCTGGAGTTTCTCCATGCCAACCAGGTGATCCACAGAGACATCAAGAGTGACAACGTGCTGCTGGGCATGGACGGATCTGTCAAGctcactGACTTTGGGTTCTGTGCCCAGATCACTCCAGAGCAGAGTAAGAGGAGCACCATGGTGGGGACTCCCTACTGGATGGCTCCTGAGGTGGTGACCAGGAAGGCCTACGGACCCAAGGTGGACATCTGGTCCCTGGGCATCATGGCTATAGAGATGGTGGAGGGAGAACCCCCTTACCTCAACGAGAACCCACTCAGGGCCCTCTACCTGATAGCCACCAATGGGACTCCAGAGCTCCAGTCTCCAGAGAAGTTATCTCCAGTGTTCAGGTCCTTCCTGTCCCGCTGTCTGGAGATGgatgtagagaagagaggaggggggaaagaactactgcagCATCCATTCCTAAAGCTGGCCAAGCCTCTCTCCAGCCTCACCCCTCTCATCCTGGCAGCCAAGGAGGCCATGAAGAGTAACCGCTAACCCTGGTTAGCCACAGATACACTGGATTCCTATGTCTCTGTGTTAGCCTGACCGCTAACTACTAGCCTTACCAGCTAACTTCCAGCCCTACTGTGCCAACTCATCAGTGCCTCTCTGTAACTGACAGCATCTCCTCCTTGATGCTAAACACCAGCCTGCTAGCGCCCTGGCTTGTACACCTACAAGTCACACAAGTCGGCTTCCTGCTCTGTTTGACTCCCCTtctcctctatccctcacccCTCACTCCATATCACACACCAGTCTTCCTATGTCTCTTACCCCCTCCCTGTCtttccctcaccccccccccccctccctgtctgtccctcaccccccctccctgtctgtccctcacccccctccctccctgtccctcacCCCTCACTCCATATCACACACCAGTCTTCCTATGTCTCTTaccccctccctgtctgtccctcaccccccctccctgtctgtccttCACCCCTCACTCCATATCACACACCAGTCTTCCTATGTCTCTTaccccctccctgtctgtccctcaccccccctccctgtctgtccttCACCCCTCACTCCATATCACACACCAGTCTTCCTATGTCTCTTaccccctccctgtctgtccctcaccccccctcctcatctctccttcaCCCCTCACTCCATATCACATACCAGTCTTCCTATGTCTCTTaccccctccctgtctgtccctcaccccccctcctcatctctccttcaCCCCTCACTCCATATCACATACCAGTCTTCCTATGTCTCTTaccccctccctgtctgtccctcaccccccctcctcatctctccttcaCCCCTCACTCCATATCACATACCAGTCTTCCTATGTCTCTTaccccctccctgtctgtccctcaccccccctcctcatctctccttcaCCCCTCACTCCATATCACATACCAGTCTTCCTATGTCTCTTaccccctccctgtctgtccctcaccCCTCACTCCATATCACACACCAGTCTTCCTatgtctctttccccctccctgtctgtccctcaccccccctcctcATCTGTCCCTCACCCCTCACTCCATATCACACACCAGTCTTCCTATGTCTCTTACCCCCTCCCTGTCAGtccctcaccccccctccctgtctgtccctcaccccccctccctgtctgtccctcacccccctccctgtctgtccctcacccccactccctgtctgtccctcaccccccctcctcatctctccttcaCCCCTCACTCCATATCACACACCAGTCTTCCTATGTCTCATACCCCCTCCTCATCTGTCCCTCACCCTTCACTCCATATCACACACCAGTCTTCCTATGTCTCTTaccccctccctgtctgtccctcaccccccctcctcATCTGTCCCTCACCCCTCACTCCATATCACACACCAGTCTTCCTATGTCTCTTACCCCCTCCCCGTCAgtccctcaccccccccccctcttcatcTGTCCCTCACCCCTCACTCCATATCACACACCAGTCTTCCTATGTCTCTTaccccctccctgtctgtccctcactccccctcctcaTCTGTCCCTCACCCCTCACTCCATATCACACACCAGTCTTCCTATGTCTCTTaccccctccctgtctgtccctcaccCCCCCCTCCTCATCTGTCCCTCACCCGCCCTCCATTTTCCTCACCCTCTTTTTCATTCAGATGTTGTGAGGTTTTCTtgttctgtttgtctctctgcctgctacctgttctttctctctctttactctgacTAAGAAACTTAAAGGTGCAATCTGTAACTTTTTTTTGTCCCACAAACAAATGGATCATTTCAAGCCTACAGTATCAGTGTTGCAGTACACCTGCAAATAAAACTACAGATTGCACCTTAAAAATAATTGCTGTATGGAACTATCTCGGTATTCAATTCAAATATTTTGGCAGCAAAaccaaataaaacatttcaaagtCGTTTTGTATATTATGTACTTTGGCAAACGTTGAGGGGTAAAAAATCTGGATATTTAGACAACTGTTTTGTAATGTGTATGAATACTTTTCATTATGTGTTTTGTGACTAACATTCGGATAGAAACCTTCCATAACGGTGTGCCTTAATGAACACAACATCTAGGCTCTATGGGGTGAATCCTAACTTTCACTTCATTAAGTTGAATTGTCACTTAGTGTTCCATTGACATCAACGCATGACTACGTGAAAACGGGACGTAAGTGGAAGTTAGGATTTGCTCCTATGATTGGCCAATCAAAAAGCATTCCACCGTGCTAGACTAGTTCATTCCATTTCACAGACATTCCAGTCAGAGAGGTTGAgtctgatgatgttgatgatttTAATAAGTATCCCCTTCTGttcttcatttttaattaatgaaACCAAACCTTTTTTTTACAGGAAGCCATGTATTTTCAAACAGTCTATGTAAATGATTAAAGATAGACTTGAACTaa
>XM_036982717.1
AGGGACAAggactgagagagacagggactgagagagacagggactgagagagacagggaccgagagagacagggaccgagagagacagggaccgagagagacagggaccgagagagacagggaccgagagagacagggaccgagagagacagggaccgagagagacagggaccgaGAGAGTAATAAGGTACACACTCGGATATTACAAGCTAAAGTAAAGCTGTTGTTGACCTACTCTTCTGAAAAGCacaggggaggaggacagaaagggtgtgtgtgtgtgtgtagatgtgtgacaGCGGTGTGTGTGAAGACAAGCCCCCCGCCCCCCCTGTCAGAATGAACAGCCAAGGAGGCGGAGCCAAGGACTCCGTGTCGGGCAACTACAACTCTCGGTCCCTCCCCTCTGTTCCTGAGGAGAAACAGAAACGAAATAAAATCATCTCCATGTTCGCCTCCGagaaaggaggcAGGAAGAAGGATCGTGATAAGGACAACAGACCAGAGATCTCCTCTCCGTCAGACTTTGAACACACCATCCATGTGGGCTTCGACGCCGTCACAGGAGAGTTCACAggcatgCCGGAGCAGTGGTCCAACCTGCTCCAGACATCTAACATCAGTAAATCGGAGCAGAAGCAGAATCCTCAGGCTGTTCTGGACATTCTCAAGTTCTACGACTCCTCCACcgcaaaacagaaatacctctcCTTCTCAGAAAAAGATGCACAGTCGcctGGAAAGCAGGGTGCCACGTCCTCGCCATCCGGCGGTAAAGACGGTgaagatgatgacgatgatggaGACGAAGCTCCGCCCCCTATTGTGGCGCCACGGCCTGAGCACACCAAATCAgtgtACACCAAGTCTGTCATCGACCCACTTCCTCCGCTGCCAGAGCCTGACTCCGCCTCCAACAGGAACAAGAAGAAACAGCAGGGCAAGATGACTGACGAGGAAATCATGGAGAAACTACGAACCATCGTCAGTATTGGAGATCCCAAGAAGAAGTACACACGCTATGAGAAGATCGGCCagggaGCGTCTGGTACTGTCTACACAGCCATCGATGTTGCCACTGGTGCAGAGgtaGCTATCAAACAGATCAACCTCCAGAAACAGCCGAAGAAGGAGCTGATCATCAACGAGATCCTGGTGATGAAGGAGTTACAACAACCTAACATCGTCAACTACgtagacagtttccTGGTAGGTGAGGAGTTGTTTGTGGTGATGGAGTATCTGGCTGGAGGTTCACTCACGGACGTTGTCACGGAAACATGCATGGACGAGGCTCAGATCGCTGCTGTGTGcagagagTGTCTGCAGGCTCTGGAGTTTCTCCATGCCAACCAGGTGATCCACAGAGACATCAAGAGTGACAACGTGCTGCTGGGCATGGACGGATCTGTCAAGctcactGACTTTGGGTTCTGTGCCCAGATCACTCCAGAGCAGAGTAAGAGGAGCACCATGGTGGGGACTCCCTACTGGATGGCTCCTGAGGTGGTGACCAGGAAGGCCTACGGACCCAAGGTGGACATCTGGTCCCTGGGCATCATGGCTATAGAGATGGTGGAGGGAGAACCCCCTTACCTCAACGAGAACCCACTCAGGGCCCTCTACCTGATAGCCACCAATGGGACTCCAGAGCTCCAGTCTCCAGAGAAGTTATCTCCAGTGTTCAGGTCCTTCCTGTCCCGCTGTCTGGAGATGgatgtagagaagagaggaggggggaaagaactactgcagCATCCATTCCTAAAGCTGGCCAAGCCTCTCTCCAGCCTCACCCCTCTCATCCTGGCAGCCAAGGAGGCCATGAAGAGTAACCGCTAACCCTGGTTAGCCACAGATACACTGGATTCCTATGTCTCTGTGTTAGCCTGACCGCTAACTACTAGCCTTACCAGCTAACTTCCAGCCCTACTGTGCCAACTCATCAGTGCCTCTCTGTAACTGACAGCATCTCCTCCTTGATGCTAAACACCAGCCTGCTAGCGCCCTGGCTTGTACACCTACAAGTCACACAAGTCGGCTTCCTGCTCTGTTTGACTCCCCTtctcctctatccctcacccCTCACTCCATATCACACACCAGTCTTCCTATGTCTCTTACCCCCTCCCTGTCtttccctcaccccccccccccctccctgtctgtccctcaccccccctccctgtctgtccctcacccccctccctccctgtccctcacCCCTCACTCCATATCACACACCAGTCTTCCTATGTCTCTTaccccctccctgtctgtccctcaccccccctccctgtctgtccttCACCCCTCACTCCATATCACACACCAGTCTTCCTATGTCTCTTaccccctccctgtctgtccctcaccccccctccctgtctgtccttCACCCCTCACTCCATATCACACACCAGTCTTCCTATGTCTCTTaccccctccctgtctgtccctcaccccccctcctcatctctccttcaCCCCTCACTCCATATCACATACCAGTCTTCCTATGTCTCTTaccccctccctgtctgtccctcaccccccctcctcatctctccttcaCCCCTCACTCCATATCACATACCAGTCTTCCTATGTCTCTTaccccctccctgtctgtccctcaccccccctcctcatctctccttcaCCCCTCACTCCATATCACATACCAGTCTTCCTATGTCTCTTaccccctccctgtctgtccctcaccccccctcctcatctctccttcaCCCCTCACTCCATATCACATACCAGTCTTCCTATGTCTCTTaccccctccctgtctgtccctcaccCCTCACTCCATATCACACACCAGTCTTCCTatgtctctttccccctccctgtctgtccctcaccccccctcctcATCTGTCCCTCACCCCTCACTCCATATCACACACCAGTCTTCCTATGTCTCTTACCCCCTCCCTGTCAGtccctcaccccccctccctgtctgtccctcaccccccctccctgtctgtccctcacccccctccctgtctgtccctcacccccactccctgtctgtccctcaccccccctcctcatctctccttcaCCCCTCACTCCATATCACACACCAGTCTTCCTATGTCTCATACCCCCTCCTCATCTGTCCCTCACCCTTCACTCCATATCACACACCAGTCTTCCTATGTCTCTTaccccctccctgtctgtccctcaccccccctcctcATCTGTCCCTCACCCCTCACTCCATATCACACACCAGTCTTCCTATGTCTCTTACCCCCTCCCCGTCAgtccctcaccccccccccctcttcatcTGTCCCTCACCCCTCACTCCATATCACACACCAGTCTTCCTATGTCTCTTaccccctccctgtctgtccctcactccccctcctcaTCTGTCCCTCACCCCTCACTCCATATCACACACCAGTCTTCCTATGTCTCTTaccccctccctgtctgtccctcaccCCCCCCTCCTCATCTGTCCCTCACCCGCCCTCCATTTTCCTCACCCTCTTTTTCATTCAGATGTTGTGAGGTTTTCTtgttctgtttgtctctctgcctgctacctgttctttctctctctttactctgacTAAGAAACTTAAAGGTGCAATCTGTAACTTTTTTTTGTCCCACAAACAAATGGATCATTTCAAGCCTACAGTATCAGTGTTGCAGTACACCTGCAAATAAAACTACAGATTGCACCTTAAAAATAATTGCTGTATGGAACTATCTCGGTATTCAATTCAAATATTTTGGCAGCAAAaccaaataaaacatttcaaagtCGTTTTGTATATTATGTACTTTGGCAAACGTTGAGGGGTAAAAAATCTGGATATTTAGACAACTGTTTTGTAATGTGTATGAATACTTTTCATTATGTGTTTTGTGACTAACATTCGGATAGAAACCTTCCATAACGGTGTGCCTTAATGAACACAACATCTAGGCTCTATGGGGTGAATCCTAACTTTCACTTCATTAAGTTGAATTGTCACTTAGTGTTCCATTGACATCAACGCATGACTACGTGAAAACGGGACGTAAGTGGAAGTTAGGATTTGCTCCTATGATTGGCCAATCAAAAAGCATTCCACCGTGCTAGACTAGTTCATTCCATTTCACAGACATTCCAGTCAGAGAGGTTGAgtctgatgatgttgatgatttTAATAAGTATCCCCTTCTGttcttcatttttaattaatgaaACCAAACCTTTTTTTTACAGGAAGCCATGTATTTTCAAACAGTCTATGTAAATGATTAAAGATAGACTTGAACTaa

Function

NR:

description
PREDICTED: serine/threonine-protein kinase PAK 2-like isoform X1

GO: NA

KEGG:

id description
K04409 PAK1; p21-activated kinase 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036982716.1 False 4427 mRNA 0.51 15 15457306 15472882
XM_036982717.1 True 4314 mRNA 0.52 15 15459882 15472882

Neighbor

gene id symbol gene type direction distance location
LOC110528890 LOC106591034 coding upstream 18639 15428476 ~ 15438667 (+)
trnar-ccu-8 NA coding upstream 36380 15420854 ~ 15420926 (+)
trnar-ccu-7 NA coding upstream 93397 15363837 ~ 15363909 (+)
trnar-ccu-6 NA coding upstream 94210 15363024 ~ 15363096 (+)
trnar-ccu-5 NA coding upstream 109591 15347643 ~ 15347715 (+)
LOC110528871 LOC105019803 coding downstream 5527 15478409 ~ 15489245 (+)
LOC110528902 atr coding downstream 19988 15492870 ~ 15498827 (+)
LOC110528777 LOC106575448 coding downstream 26555 15499437 ~ 15505193 (+)
LOC110528898 LOC106574671 coding downstream 40983 15513865 ~ 15515686 (+)
stag1a LOC106575446 coding downstream 57720 15530602 ~ 15575474 (+)
G578383 NA non-coding upstream 14729 15441415 ~ 15442577 (+)
G578344 NA non-coding upstream 38623 15417797 ~ 15418683 (+)
G578303 NA non-coding upstream 77278 15375703 ~ 15380028 (+)
G578297 NA non-coding upstream 102491 15353086 ~ 15354815 (+)
G578290 NA non-coding upstream 110715 15335982 ~ 15346591 (+)
G578398 NA non-coding downstream 35289 15508171 ~ 15508444 (+)
G578404 NA non-coding downstream 51383 15524265 ~ 15524815 (+)
G578423 NA non-coding downstream 94156 15567038 ~ 15568865 (+)
G578356 LOC106574468 non-coding downstream 106054 15578936 ~ 15582633 (+)
G578427 NA non-coding downstream 118507 15591389 ~ 15591597 (+)
G578031 NA other upstream 201099 15255171 ~ 15256207 (+)
G577909 NA other upstream 442771 14972625 ~ 15014535 (+)
G577876 LOC106575485 other upstream 485699 14961205 ~ 14971607 (+)
G577561 NA other upstream 1050708 14406096 ~ 14406598 (+)
LOC118965342 NA other upstream 1226374 14218353 ~ 14230983 (+)
LOC110528906 LOC106574480 other downstream 520776 15993464 ~ 16004993 (+)
LOC110528915 LOC106574584 other downstream 573401 16046065 ~ 16048048 (+)
LOC110528786 omp-1 other downstream 985163 16457220 ~ 16463699 (+)
G579566 NA other downstream 1345660 16818542 ~ 16819890 (+)

Expression


Co-expression Network