LOC110495705 (LOC106575419)


Basic Information

Item Value
gene id LOC110495705
gene name LOC106575419
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 15583137 ~ 15588369 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036982730.1
GTAAAGTGAATGAAAATGAATTGATAAAGTCAAAAAAAGCTCAGCAAATTGCCGTGGAATTGAGAGCGATGTCATGGGATTTAGAAACTATTGCCACGTTTCATTACCATCCAAAAATAGGCGTTGCAGTTTTAAGACGTTACCTCTGAGCGGAGGGGAGTAACGTTTTAGCTAAGAAAATACGACACCGAATATGCAAAAACAAGGGGTGTAACTTTTTCGATATCGATAACTGGTTCAGAATATGTCATTTATATCATTCTTACACGTTCGGTTGAAGCGGTATTAACGAGAGAAGTCGGAATCTTTAATATAAAGCTAACCCAGTCTCATGTTAGGgtgatagctaacgttagtaatACTGGTGTTTTAAAGATGAAGTTGTCTTCTGTTGTAGTAACATTGATATTAACGGTGGGTGTTTCTTATTACATCTATACACCGTTACCTGCTGCCATCGAGGAGCCTTTGAAACTGATGCTGCTGGACGCCTTATTCCGTGCTATGCTGCAAGTGgGTGACCTGTGCCAGTGTCTGGGTCTCAGTCACCACATCCCATGGATTCGGGGGACCATATCGGGGCTGGAGACCCTGGGGGAGATGGCGGGAGGGCAGAGAGGCGGGGTGAGGGTGAGTGACGTGGACTTTGACAGAGTCCCGGTGCGTGTGTACGAGCCCCCGGCCgcggggggaggagaggggggtctGAGGAGGGCTGTGATGTTCTACCATGGAGGAGGATGGGCCCTGGGGGCCaccaaGATGGGGAGCTATGATGTCTTGTGTAGGCAGATGTCTGATGAGCTGAATGCAGTGGTTGTGTCTGTAGAgtatcgTCTGGCTCCAGAAGTGCATTTCCCTGTGCAGTATGAGGACTGTCTGGCTGCGGCCAAGCACTTCCTGGAGCCGGGCATTCTGGGAAAGTTGTCTGTGGATCCACAGCGTGTGGCCGTGTCAGGCGACAGCGCTGGAGGAAACCTCGCTGCGGCTGTCGcacagcagATCTCGATAGATGACAGTGTGAGTGTGAAGTTCAGTGTTCAGGCGTTAATCTACCCAGTCCTCCAGGGTCTAGACCTCAACACTCCATCCCACCAACAGAACCACAACATACCCATCCTACACCGCTTTATAatggccagGTTCTGGCTGCTCTACCTGGGGGTTgatacctctctccatcccctcctcttgtccccctccttcctccatcatccctccatccctccctccctccgctcccATCTCAACTGGACCAACCTTCTGCCAGCCAAACACATTAAGCATTACAAGCCTGTTGGCATGGAGATGGGGTCACAGGAGGTCATGGGGCAGGAGGGTAATCTTCTCCCGGTGTTGTTGGATGTCCGAGCGGCGCCGCTGCTGGCggaacagggggttctgggtagAACGCCGCGAGCTTACATTCTAACGTGTGAGTACGATGTGCTCAGAGATGATGGGTTGATGTACACCAGGAGGCTACAGGACGCGGGCGTCACGGTTTCCAGCCATCACTATGACGATGGTTTCCACGGCGCCTTGAGTTTTGCACACTGGCCATTTTTCTTTGATGTGGGGAAAAGAATGATCAGAGGATACATGGACTGGCTGCAGGAAAACctctagtgtgtgtttgtgtgtgtgtgtgcgcaactGCAAACCCAAAGCCATCTTGCAGTCAGAATTTCAGACCAATGTTCAGGTTAGACAAGCAGATGTTTTAAGGCTTTTAAACTGGGTTCAACCTGATTGTTGACCTGGGTTAGAATGTCTCTCTTACTGGGTTAAACTGGATCAAACTGGGTTGGACGGGTGTTTTAAACTGTGTTAGATTGTAAGAATATAACAGAGACACCGTTCCCTGATTTGTAGCTGTTTGCACTCTggggggtgtgtgagtgtgtcacaATATGTTTGGTTccgttaaacacacacacgccatccTATCCCAGCTCTGCTCACCTGACCTGAACAATACATATGCTGTGTTTTAAACATGCAGTCTGTTATGTCTGTCAAACTAATACACTAAAATAAACGTCCATCTAAGCCAATCAATGCGCAGTGTTAGAATGTGGTAATCTGATAACAGTCCTAGTTCTAGACTAGATTGGGTTAAATTATGTTATGTGCACAACTGGTTTATACATCAATGCAATCTATAAAGAATTGTGCCTCTATGGAAAAACCATGAAGACTCAAAAGGTAGGGTCATACAACACGATCCCCTGGTGCTGTGAAAAGCAATAACACAACTTGAAAAATAAGTATGTTCTTTAGACAAGTTATGGAGTGAGGAGTTCATCTACAACCAGACTGTATTTACACACTTCATCTGACAACGCTGTGAGAGCTTGATTGTTTTCCACTGAACAGAATGATCTCAGTTGTCCCCAGTAACTGCTGCTGGGTGTCAGTACTTTATGTACAATTATGATTGTAATGGTTGCTAGATGTTTAACCCTCTAATAAATATGAATCAGTTTAA

Function

NR:

description
neutral cholesterol ester hydrolase 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036982730.1 True 2491 mRNA 0.47 6 15583137 15588369
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110495698 LOC106574468 coding downstream 485 15578875 ~ 15582652 (-)
LOC118965258 LOC106575449 coding downstream 60939 15517843 ~ 15522198 (-)
LOC118965257 NA coding downstream 125575 15444105 ~ 15457675 (-)
LOC110527385 LOC105019808 coding downstream 290172 15238093 ~ 15292965 (-)
LOC110527388 LOC106575464 coding downstream 345299 15197254 ~ 15237838 (-)
LOC110495701 ghsr coding upstream 238638 15827007 ~ 15830774 (-)
LOC110497076 LOC106574477 coding upstream 296502 15884871 ~ 15894803 (-)
LOC118965259 NA coding upstream 412083 16000452 ~ 16005279 (-)
LOC110528781 LOC106575244 coding upstream 459650 16048019 ~ 16064477 (-)
LOC110528908 LOC106574585 coding upstream 479513 16067882 ~ 16070915 (-)
G578582 NA non-coding downstream 14354 15566237 ~ 15568783 (-)
G578514 LOC106575446 non-coding downstream 18896 15561753 ~ 15564241 (-)
G578569 NA non-coding downstream 34273 15530560 ~ 15548864 (-)
G578565 NA non-coding downstream 57403 15525526 ~ 15525734 (-)
G578560 NA non-coding downstream 70142 15512739 ~ 15512995 (-)
G578586 NA non-coding upstream 1821 15590190 ~ 15590449 (-)
G578590 NA non-coding upstream 7949 15596318 ~ 15596635 (-)
G578592 NA non-coding upstream 10897 15599266 ~ 15599537 (-)
G578593 NA non-coding upstream 11346 15599715 ~ 15599945 (-)
G578594 NA non-coding upstream 11761 15600130 ~ 15600641 (-)
LOC110515884 LOC106575482 other downstream 547870 15005430 ~ 15035345 (-)
LOC110527381 LOC106575483 other downstream 594391 14972626 ~ 14989110 (-)
G578104 NA other downstream 673994 14893403 ~ 14909143 (-)
G578601 NA other upstream 37717 15626086 ~ 15626699 (-)
G579028 NA other upstream 313600 15897176 ~ 15963543 (-)
G579102 NA other upstream 484500 16072869 ~ 16073146 (-)
G579125 LOC106574487 other upstream 541124 16129493 ~ 16130317 (-)

Expression

LOC110495705(LOC106575419) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 500.
End of interactive chart.

LOC110495705(LOC106575419) Expression in each Bioproject

Bar chart with 21 bars.
LOC110495705(LOC106575419) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1000.
End of interactive chart.

Co-expression Network