fndc3ba (LOC105019796)


Basic Information

Item Value
gene id fndc3ba
gene name LOC105019796
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 15649546 ~ 15814242 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036982736.1
GTTCTATGTAATACAAAGGTTTCATATCCTCTTTATTTCTAAACCCTGGCCAACCCTCCTGCAGGATTACCCACATTGGGCCTGTTACATAATCATTTAACTGGAGACCGCTGCAGGCTTTTGCTCCTGCCCTGCATTCAGACGAGCCCCACATGCCAACAGGTATGCTCCTACAAAGCCCATCTCACCTCTGCCACCAATTTGACAGGTTGATTTCTAGAGAGAGATTGAGCTGAATGGGGATCAGGTGGTGCAGAGGCCAGAGCACTACTCCCTGCAACACTAAATCCCAGGCCTTGGCTGGGGGCAGAAGTAAGTCTAGCTCTAGGCCTTGATTCAACAATGATTGAAATGAAAaagtaatttccgattgagccgataTATGCAGCGTTTTACCATGAATGCAGTATCtgaacattgcctttacatttcaatcgcgCTAAACAGTGGATCTGCAGCATCACGGGTTGAATCTAGGGCCTACTCTCAGAAACACACAGCCCCGTGCTACAGTAGAAGTGGGTATGCGTGGTATAGAAGGTATTACGGTAGAAATGGGCGGGCTTTAGCCTCCATGTGCCGCCGCAGGGTTTTGATTGACAGCTTGGATTGTCCCAGAGAGCGCGCTGCGCGGGCAGAGTCTAGGCAGGGGGATCCAACAACCAGCCCTGGAGAAAAAATAACACACAGCAGCGATCGTCTGTTTCAAGATTATTTTATTGCAGTGAGgtAGGCCAGGCCAGTGTGTGTATCCATGAATGTACGTCACCATGATGATGACCGACCAGCTGATGGACTTAGCTCCGCCTCCGCTGCTGAACGGGGAGCTGCCGCTGATGCAACACATGGTTAATGGAGACGCAGCGCAACAGGTGATCCTGGTACAGGTGAATCCAGGGGAGACCTTCACCATCAGAGCGGAGGACGGCTCGCTGCAATGCATCCAGGGTCCTGCTGAGGTCCCAATGATGTCCCCCAATGGATCAATCCCCCCCATCCACGTCCCCCCAGGATACATCTCCCAGgtgttagaagacaacacaggagtgcgTCGGGTGGTCGTCACCCCGCAGTCTCCTGAATGTTATCCCCCTTCGTActcccccgctctctcccccACGCACCACCTCCCGCCGTACCTCACCCACCCCCACTTTATCCCCAACTCTCACTCCTTCTATCCCCCTGTGAGTCCTGGAGACCTGTCCCCCCACCAGTACTACCAACACCACCTCCCGCCCATATATGGAGAAGAGATAATCCCAGTGTATGGCATGTCCAGCTACGTTGGCAGAGAGGAGAGCTATAACAAGCCCCAGCCTAAGAAGATGAAGGAGCAGAGACAGCTAGAGCGACAGAACAGACTcaactctcccccctcctccctgtacAAGTCTCTGGGCTCCAGCCACAATGGATACAGCGGGAAGAGCCACGTCCCTTCGCTAGGGTCGTTGGGGTCAATGGGCGGAGCTAACAGTCCAGGAGGGAAGAAGCCGGAACGACGACAACTACGGAGCAGCCCAAGGAGCAAcgagccagacacacacacacaatcaccgcaagATCACGACTCGGAGGCAAAGAGAGTTCAGGAAGTGCTCTCCGCCATCGACAAACCacagGTGTCCAACGTGCACGCGCGGGGTGCTAGGTTGTCCTGGGCTCCCCCGGTCGGGCTGGTGAACCGGTTCAGCAACAGCCAGTCTCTCACCTACGAGGTCTCTCTGTCCGACAAGGGACGGGACGGCAAATACAGACTTATatacagtggagaGGAGTTGGAGTGTCATCTAAAAGACCTGAGGCCAGCTTCAGACTACCACGTacgagtcaGCGCGGTGTGTAACTCTAACTTGAGGGGTGTGTGTTCGGAGACGGGGTCGTTCACAACACACACCTGCCCCCCCGACCTGCCCTTCCCCCCCAAACTATCTCACCGCTCCAAGAGCACCCTCACACTGCAGTGGAAGCCTCCAGTCGACAACGGATCCAAAATCACAAACTACCTTCTTGAGTGGGATGAGGGAAAGAAGAACAGTGTATTTAGAGAATGTTACTTTGGGAGCCAGAGACACTGTAAGCTGACCAGACTGTGTCCTGCTGTGGGCTACACCTTCAGAGTGGCTGCTCACAACGACATAGGCACCAGTGGCTTCAGTACGGAGGTTGTGTTCTACACTACAGGTACGCTGCCCTCCTGCCCCCTGGCACCGCGGCTGCTGCGGGCGGGCGTCTCCTGGGTCACGCTGGAGTGGGGCCGTCCCGAGGGCAGCGCCAACGAGGAACTAATCACATACACACTCGAGATCCAGGAGGATAATACCGGAACAGACTTTCATCCGAAGTACACTGGAGACAACCTAACCTCCACAGTGCAAGGCCTGAAGAGGAGCACACAGTACAAATTCAGGcTGATAGCGTCTAACGTGGAGGGTGGCAGTAAACCCAgtgaagtgttggtgtgtactaccTGTCCTGACAAACCTGGACCCCCTTCTCCCCCCCGAGTCACGACCACTACATCTTATGGCTTCACCATCACCTGGgATCCTCCCCAGGACAATGGAGGTTCAGAAGTTCTGACGTATCTGCTGGAGATCTCAGAAGGCAGCTCTGACGCGGGCCAGTGGGAGGTGGCGTACAGCGGCCCCgctacagagtgtgtgtgtgaagaacTGACGCCCGGCACAGTTTACCGCCTGCGAGTGTGTAGCATCAGCACCGGTGGACACAGCcagTGTTCCTTCAGCGTTCCGGTTCGGACGTTGAGCGTCGTCCCCGGACCCTGCCAACCGCCCAGGATCGTGGGTAAAGCCAAACACAAGGAAGTACAGTTAGAATGGGatgtACGGCCTGACATCAGAAGGTGTTGTGTGGAGGAGTGTATGTTCAGTCTGGAGATGACATCATCAGAGGGCAACGCTGAGCCCAGTGAGGTGTACAATGGGACAAAGCTGCAGTGCAGTGTGGGTAGCCTGCTGCCGGGGGCAACCTACAACTTCAGACTGAGGGCTGCCAACGAGTTTGGAGAGTACTCTGAGGCGGTGGAGGTGACGACAGCAGCGGGTCCTCCAGGCCAGTGTGTGGCACCACTCATCACTCTGAACAACACCACCTGTCTAACAGTCAGCTGGGAGAGTCCTGAAGGATCAGGCTCTGACATCTCAGAGTATCGCCTGGACTGGTCCAGGGAGGAGGAGCCAATGGAGCTGATCTACTGTGGACCAGAGACCCAGTGTGAAGTATCAGACTTGACCCCCGCaacacactactgctgtagactacagGCGGTGAACCAAGCGGGGGCGGGGCCTTACAGTGAACAGATGACCTTCCAGACTCCAGCGACTAATCCCGACGCAGTCTCTTCTTTCTTCCTGCTTGACCAGCTCCAATCAGATCAGTCCCCCTCCACCTGCCTCTTCCTGAAGTGGGAGGAGCCTAACTGTAATGGGGCGGATATAACGTCTTACATCATCAGTCTGGACGATCAACTCATTACCGTGGAAACAGGAACCAGTCACCTGATCACTGACCTTCAGCCAGACAGCcagtacagtgtGCAGATCCAAGCGGTGAATGTGATTGGCTGTGGCCCGTTGAGCCCACCCCTGGTGGCTAGGACACGCCCCCTCCCTCCGGCTCCTCCTCCTTTGGAATGTTCGGCTGCCGGCCCCCAGAGCTTGAAACTGAAGTGGGGGGAGaacgctgcacacacacacacccgcgccCTGCTCTCCAATGACATGTTCTACACACTACAGATGGAAGATAAGAACCACAGGTTTGTGTGTATCTACAGAGGTCCCAGTCATACTTACAAGGTGCAGCGCCTGACAGAGTCCACCAGTTACCGGTTCAGGATCCAGGCATGTAGTGATGCAGGGGAGGGACCCTTCTCAGACACGCATACCTTCTCTACCACCAAGACTGTACCCTCCGCACTCAAAGCTCCCAGAGTGCACCAGCTGGAAGGGAATGTGTGTGAGGTCACCTGGGAGGCCATTCCACCAATGAGAGGCGACCGTGTCAACTACATCCTTCAGGTGCTGGTTGGACGAGAGTCAGAGTAcaaacaggtGTTTAAGGGAGAAGAGAGTGCGTTCCAAATCACCGGACTCCAAGGCAACACCGACTACCGTTTCCGTGTGTGCGCCTGCCGCCGTTGCCAGGATACCAACCATGAACTCTGTGGCCCTCTTAGTCCCTCCTCCCTGTTCACCTTGCGTCGCCAGGAGCAACAGTGCCTGGGAGAGACAAGCGCCGTGGAGACGGTGAAAGGGGCGGGGATAATATCCAGCGATGAGCGCTTTGCGGCGGTCGTGGTGTGTGTGTTCGCCGGTGTCTCCATCCTCATGGCCTGTCTGCTACAATACTTCTTCATGAAGTGAGGGAATGAATCGGCAACAGGATAGAAAAGAGAAAACAAAGCGATAGCGAAAGAAAACAAGCATCTACTAAAGAAAGGAAAGAAAACAAACATCTACTAAAGAAAGGAAAGAAAACAAACATCTACTAAAGAAAGGAAAGAAAACAAACACTTGAGAATCAAGTGCAGGATAGAAAGAGAAAAAAACGAGAGAGGAAACAGACTTCAAACGAAACAGACCTGAGCTGTACTTCAGTTATTCTCCCGCGACGTTGTAGTCCACctatctctttcctcttctctctcccctctctcctctctctctttccctctctctcgctcgctcgctctctctgtttctcttgtcATTGTTAGTTTGGTCTCTCTATCTTATGTAATGGATGTATTTGGAGGGAAGCTGTTCGTGGCCAGAACAAACAAACTGATAACCAAGCATTAGCCAGCCAGGAGCCCAGTAAAGCTCCTCAATGACCCGCATGACATTATTTTGTATCTTTTTAAACCTAATAGACAAAGTGTATTTTTCTTTATATTTCTTTACAGTCAATTCCTTACTTTACTGTGTCTGTGTCCTATTTGCGCTGTTCGCTGCAGTCTTTCGTAGTTTTTTCCCGTTACGCCATTTTGAAATGTAGTTCTAAAGCTTTAGCCATGTTTTCATCAATATCTGGTACCTTGTCTATTATAGGCCAAATCATGCAATCTTTacgcacagatgcacacacagacacatagacacatagacacacagaatcatacacatacaggcacacatgCACAgcgagacaaacacacacacatgcacacacacacacacacatgcacagagacagaaacactcacTCAGATGCCTTCTCTTCTGTCTTCTTTATTCAGCTACCAAAGCGATAAAAAATGCTGCTATCCTGTTTCGTTATATCTGAGAAAGAATGGATTTAGTTACCTAATATATACAATCTATATCAAATATATCTATGATAGATCTACCTATCTATATCTGTAGGGGCGATGCTATGATGTAATATAAGAAGTGTAGAGGTCtggatgacagagagaaagaggagggatcCAGGTAGGTGTTGCcttttaaccacagatctaggaccagcttTCTCTCTCCTGAAGCTAACTTAAACCATTAAGAGTGGGAAATGCAAAGCTGACTTTAGATCAGTTTAGGGCAAGGGTGTAAAACCAGGCACCTGGATGGCCACACACCTGGCCATATCTAGCCAACCAGCAACAACAGTTGATCAATTTAGTTTGAGGTTGATAAaaacatgatgacactttgacctgtGAGAACTGGACCTGACACCCCTGGTCTAGGGATAACCTGGTATATTCCACTGGGAGTGGTTTAGTGAATTATAATATGTATTCTAGGTGCTCACCTGCAGATCTGAGGTCAGTTCAGTAGCCAGTCCCCGCTGTCGAATGTAGAGGTTACTGAAGTAACCTTTTATCCGCCCCCCACCCCCACTCAACCCTCATACCTATTCATACCCTTCTTTTTTCTCTGCCTCCGCTCTCTTTTTCTATCCCTCTGCCATTCTCAGTacgtctccctcccctcctcgttcctaacctccctccctctccctccgtctctctaaTTAATGCTGttatcatcccactct

Function

NR:

description
fibronectin type III domain-containing protein 3B

GO: NA

KEGG:

id description
K24485 FNDC3; fibronectin type III domain-containing protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036982736.1 True 6033 mRNA 0.52 28 15649546 15814242

Neighbor

gene id symbol gene type direction distance location
ppp2r3a ppp2r3a coding upstream 2490 15605957 ~ 15647056 (+)
stag1a LOC106575446 coding upstream 74072 15530602 ~ 15575474 (+)
LOC110528898 LOC106574671 coding upstream 133860 15513865 ~ 15515686 (+)
LOC110528777 LOC106575448 coding upstream 144353 15499437 ~ 15505193 (+)
LOC110528902 atr coding upstream 150719 15492870 ~ 15498827 (+)
LOC110495697 LOC106574566 coding downstream 17568 15831810 ~ 15868293 (+)
LOC110495702 LOC106574475 coding downstream 58904 15873146 ~ 15883313 (+)
LOC110528900 NA coding downstream 95548 15903494 ~ 15927285 (+)
LOC110528779 NA coding downstream 119184 15933426 ~ 15935198 (+)
LOC110518760 NA coding downstream 127883 15942125 ~ 15943670 (+)
G578431 NA non-coding upstream 45636 15603633 ~ 15603910 (+)
G578430 NA non-coding upstream 49585 15599737 ~ 15599961 (+)
G578429 NA non-coding upstream 51205 15598074 ~ 15598341 (+)
G578427 NA non-coding upstream 57949 15591389 ~ 15591597 (+)
G578351 NA non-coding downstream 2344 15816586 ~ 15819486 (+)
G578496 NA non-coding downstream 32798 15847040 ~ 15860489 (+)
G578755 NA non-coding downstream 81194 15895436 ~ 15895784 (+)
G578761 NA non-coding downstream 94661 15908903 ~ 15933022 (+)
G578389 NA other upstream 185181 15462245 ~ 15464365 (+)
G578031 NA other upstream 393339 15255171 ~ 15256207 (+)
G577909 NA other upstream 635011 14972625 ~ 15014535 (+)
G577876 LOC106575485 other upstream 677939 14961205 ~ 14971607 (+)
LOC110528906 LOC106574480 other downstream 179416 15993464 ~ 16004993 (+)
LOC110528915 LOC106574584 other downstream 232041 16046065 ~ 16048048 (+)
LOC110528786 omp-1 other downstream 643803 16457220 ~ 16463699 (+)
G579566 NA other downstream 1004300 16818542 ~ 16819890 (+)
LOC110527403 LOC106574539 other downstream 1228167 17042409 ~ 17097924 (+)

Expression


Co-expression Network