LOC118965263


Basic Information

Item Value
gene id LOC118965263
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 15969458 ~ 15971366 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052531.1
CAGTAAAATGGCACAattgtcaatactgatattcgtCGCAAATGACAATGTCTTACTCTGCCCATATGCATTCTGATAACATATGACATCATTGGAGTTAAAAACATTTGGGTGGAGACATTAAGGAGCTCAAATCAGAGACTTCATTAATCATAGAATGCTGTATATAATGTGCACATAATGTGCTTAATTattgtggttgtcccacctagctatcttaagatgaatgcacagaggtgctctggataagaatgtctgctaaatgaataaaatgtcatgtaattgtaaATGATAAAACATGAGTATTGCTTGCTACAATATTTCCTATATTAAGAGTGTCAAATACTGTAGTTGTATGTGAAGATGTGTAATGCTTTATGAGTATAGTAAAGTTGTACAACGCTGTGTGGAGCTGTATGAGTGGTTCTGTTAGTGCAGGGTGTGCTCACTCTTGTGTGAAGGAGGTTGTTGTACGGCGTCTTAACTAGACTGTATCACTGTGGTACACGTTCGGTGGAGGGACCAAACTGCTGCTGAGAACTGGTCCTACTGTCAGTCCCACGGTGTCTCTGCTCCCCCCCTCCTCTGAGCAGCTCTCTGGAGGCTCTGCCTCACTGGCCTGCCTGCTGACTGACTACTCCCCTCAGGGGGCGCTGGTGAGCTGGGAGGTGGACGGGCTGGAGGTGAGCCAGGGGGTCGTGACCAGtccagaagaagagaaggaaggccTTTACAGACGCAGCAGCATCCTGACCCTGAGCAAGGCAGGCTGGGAGCAGGGAGAGCTCTACACCTGCAGGGTCTCCCACTTCCAACACACCCAGGCCTCCCCCCTTCGTAGGAGCCAGTGTCTGGTCTAGGACCTACTGGAGGAGGCCCACAACAGGAGCTCTGTCTGGGGAAGCAGGAGTAGACgaggctctggtctggtctggggcCTGGTTGGAGCAGTAGTagtgtgttagagtgttagaGTAGTGTACTGAGTAAACTCTAGTACTGCCGGGGAGACCACATCCTGGGTAGTAATGTGTATTGTATAGATTACCGGAGACTTCAATGTGTTCTGTACTCAGACTGTTACTGTGATGTTGCTGTCTGCCTCAGTTCTAATAAAGTTGGATTTGGAAAATAACA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052531.1 True 1137 mRNA 0.47 2 15969458 15971366

Neighbor

gene id symbol gene type direction distance location
LOC110495721 NA coding upstream 14339 15949966 ~ 15955119 (+)
LOC110518760 NA coding upstream 25788 15942125 ~ 15943670 (+)
LOC110528779 NA coding upstream 34260 15933426 ~ 15935198 (+)
LOC110528900 NA coding upstream 42173 15903494 ~ 15927285 (+)
LOC110495702 LOC106574475 coding upstream 86145 15873146 ~ 15883313 (+)
LOC110528907 LOC106575427 coding downstream 13274 15984640 ~ 15989128 (+)
LOC110528906 LOC106574480 coding downstream 22098 15993464 ~ 16004993 (+)
LOC118936678 NA coding downstream 48346 16017180 ~ 16025072 (+)
LOC110528881 LOC106575246 coding downstream 54852 16026218 ~ 16034502 (+)
LOC110528915 LOC106574584 coding downstream 74699 16046065 ~ 16048048 (+)
G578766 NA non-coding upstream 5915 15926216 ~ 15963543 (+)
G578788 NA non-coding upstream 15056 15950307 ~ 15954402 (+)
G578786 NA non-coding upstream 31490 15936936 ~ 15937968 (+)
G578793 NA non-coding downstream 2628 15973994 ~ 16030905 (+)
G578808 NA non-coding downstream 41997 16013363 ~ 16013852 (+)
G578831 NA non-coding downstream 98641 16070007 ~ 16070295 (+)
G578848 NA non-coding downstream 139340 16110706 ~ 16110972 (+)
LOC110528902 atr other upstream 470872 15492870 ~ 15498827 (+)
G578389 NA other upstream 505093 15462245 ~ 15464365 (+)
G578031 NA other upstream 713251 15255171 ~ 15256207 (+)
G577909 NA other upstream 954923 14972625 ~ 15014535 (+)
G577876 LOC106575485 other upstream 997851 14961205 ~ 14971607 (+)
LOC110528786 omp-1 other downstream 486679 16457220 ~ 16463699 (+)
G579566 NA other downstream 847176 16818542 ~ 16819890 (+)
LOC110527403 LOC106574539 other downstream 1071043 17042409 ~ 17097924 (+)

Expression


Co-expression Network