LOC110528873 (ino1a)


Basic Information

Item Value
gene id LOC110528873
gene name ino1a
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 16202189 ~ 16210165 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036982763.1
GCTATCTATAAATGAACGGGGCTCTACTGGATATCCTCCTGCACTCGCAACGGCAATTTTGGAACATCCCATCTTCATGTCACTTCGGCTCACTTGACGAATCGAAGAGGTCGGGCTGCGTTTGAGAACAAGCGATTTAATAGGTTATTAGATGAAATATAAAAGAAAATTCGAAACAAGCAAGCTATCAAATCAACGAATAACCGTCCGTAACCTATCACTGTTGTTTAGAAGAGAAAATTAAATCTCCTGACTCCAACGTATTCCACGgcctctctctctgtcactctctctcaagCCTGCAGTCATGACCGAGAACATTCGTATCAACAATCCCAATGTGaagtacacagatacacacattgAGGCTCAGTACTGCTACCATACTACTGCTGTACGCAGGGACGGAGACACACTCACAGTGACCCCGTCCGTTAGTGAGCTTGAGTTCCGTACTGAGCGACATGTCCCCAGGCTGGGGGTGATGCTAGTTGGCTGGGGAGGAAACAATGGGACCACCGTCACCGCTGCTGTACTGGCCAACAGACTGGGACTCACCTGGAGAACCAAAACTGGAGAACAgaAAGCCAACTACTACGGTTCCCTCTTCCAGTCCTCAACTGTGTGTTTAGGTGCGGGGCCAGATGGAAAGGAAGTTAACATTCCGTTCCGTGACCTCCTACCCATGATGCACCCTAATGATATCGTCTTTGATgagagagtgtgtgtgtcaggctgggACATCTCATCCATGGATCTGGGCAGTGCGATGGAGAGAGCCGAGGTCCTTGATTGGTCCCTCCAGGAGAAGCTCCGCCCACACATGAGCCACCTCCGACCCCGGGCCTCCATCTATATCCCAGAATTCATAGCTGCCAACCAGGCGGGCCGAGCAGACAACGTTCTGAAAGGGACCATGGCTGAACAGgtggAGCAGATCAGAGCAGACATTCAGGACTTCCGGCATTCAAGCGGCGTGGACAAGGTCATCGTTTTGTGGACGGCCAACACCGAACGTTTCTGTGACCTCACAGCCGGGGTCAACGACACGGCCAAGAATCTCCTGGCTGCCATACAGtcAGGTGGGGAGGTGTCTCCCTCTACTTTGTTTGCTGTGGCCAGTATCCTGGAGGGCTGTGCCTACATTAACGGTTCTCCCCAGAACACGTTTGTCCCTGGGGCGATAGAGCTGGCTGTGGAGAGAAATGTGTTCATAGCAGGAGATGACTTCAAGTCTGGTCAGACAAAGATCAAGTCAGTCCTGGTCGACTTCCTCATCAGTGCTGGGATCAAGCCCACCTCCATTGTCAGCTACAATCACCTTGGCAACAACGATGGTATGAACCTCTCAGCACCGCAGCAGTTCCGCTCCAAGGAGATCTCCAAGAGCAATGTGGTGGATGACATGGTCAACTCCAACCCTATACTGTACCACAATGGGGAGAAACCTGACCACTGTgtggtgaTTAAGTATGTGCCGTATGTGGGGGACAGTAAGAGGGCGATGGATGAATACACCTCTGAGATCATGATGGGAGGAACCAACACTATCGCAATGCACAACACCTGTGAGGACTCTCTGCTAGCCAGTCCTATCATCCTGGACCTGGTCCTCCTCACAGAGTTGTGTCAGCGTGTATGTGTTCGGCCCCAAGGATCAGAGACCTTCCAGTCCTTCCACAGTGTCCTGGCTATCCTCTCCTTCATGTGTAAAGCTCCCCTCGTCCCCCCTGGGGCCCCGCTGGTCAATGCCTACTTCAGACAGAGAGCCTGCATTGAGAACATCATGAGAGCGTGCCTTGGTCTCCCCCCTCAGAACCACATGCACCTGGAGCACAAGCTGCAGAGGGGCTTCCTGCCTCGCCACGACAACCGTATCTACGACAATGTGGCTACCAAGAGGGTCCTAAGCAACGGTTACCACGCCTCCCAACAGAATGGTGTCTGCGCACACGTGGTGAAAGAGGCAACGATTGGATAATGGCTGCAGATTAGGTCTCTGTCATCACAGGGAAGATTCTAGAAGTGTCCACAGCCACAGAGAAACAATTATATCcatagtttagtttattaggatccccattagctgttgcacatgcagcagctactcttccatgGGTTACACACTATTACATATTTAGATACTTATACAGTGCAGTTAAATTAGATCCATAGAAAGTTAGCCAAACTCTTTATACAGCATACTGTATGATGATCATGTTTTATTTGGCCTGGTTGTGTAAGATACATACAGTAGGAAACACAACCTCTAGTTGGCTTTAACCATTGTCACTTTTGGACAACCAGTCTAATATTCTGTGGTTTTAGACTCTTATTGCTCATATACATACAAATTTAACCAAAATCTGTTCATGTATTTGTTCCAatgatacagtggggagaacaagtatttaatacactgctgattttgcaggttttcttacttacaaagcatgtagaggtctgtaatttttatcataggtacacttcaactgtg
>XR_005052533.1
GCTATCTATAAATGAACGGGGCTCTACTGGATATCCTCCTGCACTCGCAACGGCAATTTTGGAACATCCCATCTTCATGTCACTTCGGCTCACTTGACGAATCGAAGAGGTCGGGCTGCGTTTGAGAACAAGCGATTTAATAGGTTATTAGATGAAATATAAAAGAAAATTCGAAACAAGCAAGCTATCAAATCAACGAATAACCGTCCGTAACCTATCACTGTTGTTTAGAAGAGAAAATTAAATCTCCTGACTCCAACGTATTCCACGgcctctctctctgtcactctctctcaagCCTGCAGTCATGACCGAGAACATTCGTATCAACAATCCCAATGTGaagtacacagatacacacattgAGGCTCAGTACTGCTACCATACTACTGCTGTACGCAGGGACGGAGACACACTCACAGTGACCCCGTCCGTTAGTGAGCTTGAGTTCCGTACTGAGCGACATGTCCCCAGGCTGGGGGTGATGCTAGTTGGCTGGGGAGGAAACAATGGGACCACCGTCACCGCTGCTGTACTGGCCAACAGACTGGGACTCACCTGGAGAACCAAAACTGGAGAACAgaAAGCCAACTACTACGGTTCCCTCTTCCAGTCCTCAACTGTGTGTTTAGGTGCGGGGCCAGATGGAAAGGAAGTTAACATTCCGTTCCGTGACCTCCTACCCATGATGCACCCTAATGATATCGTCTTTGATgagagagtgtgtgtgtcaggctgggACATCTCATCCATGGATCTGGGCAGTGCGATGGAGAGAGCCGAGGTCCTTGATTGGTCCCTCCAGGAGAAGCTCCGCCCACACATGAGCCACCTCCGACCCCGGGCCTCCATCTATATCCCAGAATTCATAGCTGCCAACCAGGCGGGCCGAGCAGACAACGTTCTGAAAGGGACCATGGCTGAACAGgtggAGCAGATCAGAGCAGACATTCAGGACTTCCGGCATTCAAGCGGCGTGGACAAGGTCATCGTTTTGTGGACGGCCAACACCGAACGTTTCTGTGACCTCACAGCCGGGGTCAACGACACGGCCAAGAATCTCCTGGCTGCCATACAGtcAGGTGGGGAGGTGTCTCCCTCTACTTTGTTTGCTGTGGCCAGTATCCTGGAGGGCTGTGCCTACATTAACGGTTCTCCCCAGAACACGTTTGTCCCTGGGGCGATAGAGCTGGCTGTGGAGAGAAATGTGTTCATAGCAGGAGATGACTTCAAGTCTGGTCAGACAAAGATCAAGTCAGTCCTGGTCGACTTCCTCATCAGTGCTGGGATCAAGCCCACCTCCATTGTCAGCTACAATCACCTTGGCAACAACGATGGTATGAACCTCTCAGCACCGCAGCAGTTCCGCTCCAAGGAGATCTCCAAGAGCAATGTGGTGGATGACATGGTCAACTCCAACCCTATACTGTACCACAATGGGGAGAAACCTGACCACTGTgtggtgaTTAAGTATGTGCCGTATGTGGGGGACAGTAAGAGGGCGATGGATGAATACACCTCTGAGATCATGATGGGAGGAACCAACACTATCGCAATGCACAACACCTGTGAGGACTCTCTGCTAGCCAGTCCTATCATCCTGGACCTGGTCCTCCTCACAGAGTTGTGTCAGCGTGTATGTGTTCGGCCCCAAGGATCAGAGACCTTCCAGTCCTTCCACAGTGTCCTGGCTATCCTCTCCTTCATGTGTAAAGCTCCCCTCGTCCCCCCTGGGGCCCCGCTGGTCAATGCCTACTTCAGACAGAGAGCCTGCATTGAGAACATCATGAGAGCGTGCCTTGGTCTCCCCCCTCAGAACCACATGCACCTGGAGCACAAGCTGCAGAGGGGCTTCCTGCCTCGCCACGACAACCGTATCTACGACAATGTGGCTACCAAGAGGGTCCTAAGCAACGGTTACCACGCCTCCCAACAGAATGGTGTCTGCGCACACGTGGTGAAAGAGGCAACGATTGGATAATGGCTGCAGATTAGGTCTCTGTCATCACAGGGAAGATTCTAGAAGTGTCCACAGCCACAGAGAAACAATTATATCcatagtttagtttattaggatccccaTTACACACTATTACATATTTAGATACTTATACAGTGCAGTTAAATTAGATCCATAGAAAGTTAGCCAAACTCTTTATACAGCATACTGTATGATGATCATGTTTTATTTGGCCTGGTTGTGTAAGATACATACAGTAGGAAACACAACCTCTAGTTGGCTTTAACCATTGTCACTTTTGGACAACCAGTCTAATATTCTGTGGTTTTAGACTCTTATTGCTCATATACATACAAATTTAACCAAAATCTGTTCATGTATTTGTTCCAatgatacagtggggagaacaagtatttaatacactgctgattttgcaggttttcttacttacaaagcatgtagaggtctgtaatttttatcataggtacacttcaactgtga
>XM_021611044.2
CTATCTATAAATGAACGGGGCTCTACTGGATATCCTCCTGCACTCGCAACGGCAATTTTGGAACATCCCATCTTCATGTCACTTCGGCTCACTTGACGAATCGAAGAGGTCGGGCTGCGTTTGAGAACAAGCGATTTAATAGGTTATTAGATGAAATATAAAAGAAAATTCGAAACAAGCAAGCTATCAAATCAACGAATAACCGTCCGTAACCTATCACTGTTGTTTAGAAGAGAAAATTAAATCTCCTGACTCCAACGTATTCCACGgcctctctctctgtcactctctctcaagCCTGCAGTCATGACCGAGAACATTCGTATCAACAATCCCAATGTGaagtacacagatacacacattgAGGCTCAGTACTGCTACCATACTACTGCTGTACGCAGGGACGGAGACACACTCACAGTGACCCCGTCCGTTAGTGAGCTTGAGTTCCGTACTGAGCGACATGTCCCCAGGCTGGGGGTGATGCTAGTTGGCTGGGGAGGAAACAATGGGACCACCGTCACCGCTGCTGTACTGGCCAACAGACTGGGACTCACCTGGAGAACCAAAACTGGAGAACAgaAAGCCAACTACTACGGTTCCCTCTTCCAGTCCTCAACTGTGTGTTTAGGTGCGGGGCCAGATGGAAAGGAAGTTAACATTCCGTTCCGTGACCTCCTACCCATGATGCACCCTAATGATATCGTCTTTGATggctgggACATCTCATCCATGGATCTGGGCAGTGCGATGGAGAGAGCCGAGGTCCTTGATTGGTCCCTCCAGGAGAAGCTCCGCCCACACATGAGCCACCTCCGACCCCGGGCCTCCATCTATATCCCAGAATTCATAGCTGCCAACCAGGCGGGCCGAGCAGACAACGTTCTGAAAGGGACCATGGCTGAACAGgtggAGCAGATCAGAGCAGACATTCAGGACTTCCGGCATTCAAGCGGCGTGGACAAGGTCATCGTTTTGTGGACGGCCAACACCGAACGTTTCTGTGACCTCACAGCCGGGGTCAACGACACGGCCAAGAATCTCCTGGCTGCCATACAGtcAGGTGGGGAGGTGTCTCCCTCTACTTTGTTTGCTGTGGCCAGTATCCTGGAGGGCTGTGCCTACATTAACGGTTCTCCCCAGAACACGTTTGTCCCTGGGGCGATAGAGCTGGCTGTGGAGAGAAATGTGTTCATAGCAGGAGATGACTTCAAGTCTGGTCAGACAAAGATCAAGTCAGTCCTGGTCGACTTCCTCATCAGTGCTGGGATCAAGCCCACCTCCATTGTCAGCTACAATCACCTTGGCAACAACGATGGTATGAACCTCTCAGCACCGCAGCAGTTCCGCTCCAAGGAGATCTCCAAGAGCAATGTGGTGGATGACATGGTCAACTCCAACCCTATACTGTACCACAATGGGGAGAAACCTGACCACTGTgtggtgaTTAAGTATGTGCCGTATGTGGGGGACAGTAAGAGGGCGATGGATGAATACACCTCTGAGATCATGATGGGAGGAACCAACACTATCGCAATGCACAACACCTGTGAGGACTCTCTGCTAGCCAGTCCTATCATCCTGGACCTGGTCCTCCTCACAGAGTTGTGTCAGCGTGTATGTGTTCGGCCCCAAGGATCAGAGACCTTCCAGTCCTTCCACAGTGTCCTGGCTATCCTCTCCTTCATGTGTAAAGCTCCCCTCGTCCCCCCTGGGGCCCCGCTGGTCAATGCCTACTTCAGACAGAGAGCCTGCATTGAGAACATCATGAGAGCGTGCCTTGGTCTCCCCCCTCAGAACCACATGCACCTGGAGCACAAGCTGCAGAGGGGCTTCCTGCCTCGCCACGACAACCGTATCTACGACAATGTGGCTACCAAGAGGGTCCTAAGCAACGGTTACCACGCCTCCCAACAGAATGGTGTCTGCGCACACGTGGTGAAAGAGGCAACGATTGGATAATGGCTGCAGATTAGGTCTCTGTCATCACAGGGAAGATTCTAGAAGTGTCCACAGCCACAGAGAAACAATTATATCcatagtttagtttattaggatccccattagctgttgcacatgcagcagctactcttccatgGGTTACACACTATTACATATTTAGATACTTATACAGTGCAGTTAAATTAGATCCATAGAAAGTTAGCCAAACTCTTTATACAGCATACTGTATGATGATCATGTTTTATTTGGCCTGGTTGTGTAAGATACATACAGTAGGAAACACAACCTCTAGTTGGCTTTAACCATTGTCACTTTTGGACAACCAGTCTAATATTCTGTGGTTTTAGACTCTTATTGCTCATATACATACAAATTTAACCAAAATCTGTTCATGTATTTGTTCCAatgatacagtggggagaacaagtatttaatacactgctgattttgcaggttttcttacttacaaagcatgtagaggtctgtaatttttatcataggtacacttcaactgt
>XM_036982764.1
CTATCTATAAATGAACGGGGCTCTACTGGATATCCTCCTGCACTCGCAACGGCAATTTTGGAACATCCCATCTTCATGTCACTTCGGCTCACTTGACGAATCGAAGAGGTCGGGCTGCGTTTGAGAACAAGCGATTTAATAGGTTATTAGATGAAATATAAAAGAAAATTCGAAACAAGCAAGCTATCAAATCAACGAATAACCGTCCGTAACCTATCACTGTTGTTTAGAAGAGAAAATTAAATCTCCTGACTCCAACGTATTCCACGCCTGCAGTCATGACCGAGAACATTCGTATCAACAATCCCAATGTGaagtacacagatacacacattgAGGCTCAGTACTGCTACCATACTACTGCTGTACGCAGGGACGGAGACACACTCACAGTGACCCCGTCCGTTAGTGAGCTTGAGTTCCGTACTGAGCGACATGTCCCCAGGCTGGGGGTGATGCTAGTTGGCTGGGGAGGAAACAATGGGACCACCGTCACCGCTGCTGTACTGGCCAACAGACTGGGACTCACCTGGAGAACCAAAACTGGAGAACAgaAAGCCAACTACTACGGTTCCCTCTTCCAGTCCTCAACTGTGTGTTTAGGTGCGGGGCCAGATGGAAAGGAAGTTAACATTCCGTTCCGTGACCTCCTACCCATGATGCACCCTAATGATATCGTCTTTGATgagagagtgtgtgtgtcaggctgggACATCTCATCCATGGATCTGGGCAGTGCGATGGAGAGAGCCGAGGTCCTTGATTGGTCCCTCCAGGAGAAGCTCCGCCCACACATGAGCCACCTCCGACCCCGGGCCTCCATCTATATCCCAGAATTCATAGCTGCCAACCAGGCGGGCCGAGCAGACAACGTTCTGAAAGGGACCATGGCTGAACAGgtggAGCAGATCAGAGCAGACATTCAGGACTTCCGGCATTCAAGCGGCGTGGACAAGGTCATCGTTTTGTGGACGGCCAACACCGAACGTTTCTGTGACCTCACAGCCGGGGTCAACGACACGGCCAAGAATCTCCTGGCTGCCATACAGtcAGGTGGGGAGGTGTCTCCCTCTACTTTGTTTGCTGTGGCCAGTATCCTGGAGGGCTGTGCCTACATTAACGGTTCTCCCCAGAACACGTTTGTCCCTGGGGCGATAGAGCTGGCTGTGGAGAGAAATGTGTTCATAGCAGGAGATGACTTCAAGTCTGGTCAGACAAAGATCAAGTCAGTCCTGGTCGACTTCCTCATCAGTGCTGGGATCAAGCCCACCTCCATTGTCAGCTACAATCACCTTGGCAACAACGATGGTATGAACCTCTCAGCACCGCAGCAGTTCCGCTCCAAGGAGATCTCCAAGAGCAATGTGGTGGATGACATGGTCAACTCCAACCCTATACTGTACCACAATGGGGAGAAACCTGACCACTGTgtggtgaTTAAGTATGTGCCGTATGTGGGGGACAGTAAGAGGGCGATGGATGAATACACCTCTGAGATCATGATGGGAGGAACCAACACTATCGCAATGCACAACACCTGTGAGGACTCTCTGCTAGCCAGTCCTATCATCCTGGACCTGGTCCTCCTCACAGAGTTGTGTCAGCGTGTATGTGTTCGGCCCCAAGGATCAGAGACCTTCCAGTCCTTCCACAGTGTCCTGGCTATCCTCTCCTTCATGTGTAAAGCTCCCCTCGTCCCCCCTGGGGCCCCGCTGGTCAATGCCTACTTCAGACAGAGAGCCTGCATTGAGAACATCATGAGAGCGTGCCTTGGTCTCCCCCCTCAGAACCACATGCACCTGGAGCACAAGCTGCAGAGGGGCTTCCTGCCTCGCCACGACAACCGTATCTACGACAATGTGGCTACCAAGAGGGTCCTAAGCAACGGTTACCACGCCTCCCAACAGAATGGTGTCTGCGCACACGTGGTGAAAGAGGCAACGATTGGATAATGGCTGCAGATTAGGTCTCTGTCATCACAGGGAAGATTCTAGAAGTGTCCACAGCCACAGAGAAACAATTATATCcatagtttagtttattaggatccccattagctgttgcacatgcagcagctactcttccatgGGTTACACACTATTACATATTTAGATACTTATACAGTGCAGTTAAATTAGATCCATAGAAAGTTAGCCAAACTCTTTATACAGCATACTGTATGATGATCATGTTTTATTTGGCCTGGTTGTGTAAGATACATACAGTAGGAAACACAACCTCTAGTTGGCTTTAACCATTGTCACTTTTGGACAACCAGTCTAATATTCTGTGGTTTTAGACTCTTATTGCTCATATACATACAAATTTAACCAAAATCTGTTCATGTATTTGTTCCAatgatacagtggggagaacaagtatttaatacactgctgattttgcaggttttcttacttacaaagcatgtagaggtctgtaatttttatcataggtacacttcaactgtg

Function

NR:

description
inositol-3-phosphate synthase 1-A-like

GO:

id name namespace
GO:0008654 phospholipid biosynthetic process biological_process
GO:0006021 inositol biosynthetic process biological_process
GO:0004512 inositol-3-phosphate synthase activity molecular_function

KEGG:

id description
K01858 INO1, ISYNA1; myo-inositol-1-phosphate synthase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036982763.1 False 2497 mRNA 0.49 11 16202189 16210164
XR_005052533.1 False 2461 mRNA 0.49 12 16202189 16210165
XM_021611044.2 False 2477 mRNA 0.49 11 16202190 16210163
XM_036982764.1 True 2468 mRNA 0.49 11 16202190 16210164

Neighbor

gene id symbol gene type direction distance location
LOC110528882 LOC106574488 coding upstream 25163 16161693 ~ 16177026 (+)
LOC110528863 LOC106575439 coding upstream 59998 16124275 ~ 16142191 (+)
LOC110528868 prdm9 coding upstream 104371 16078839 ~ 16097818 (+)
LOC110528915 LOC106574584 coding upstream 154141 16046065 ~ 16048048 (+)
LOC110528881 LOC106575246 coding upstream 167687 16026218 ~ 16034502 (+)
LOC110528895 LOC106574495 coding downstream 19639 16229804 ~ 16268664 (+)
LOC110528905 LOC106574496 coding downstream 59035 16269200 ~ 16279190 (+)
LOC110528903 LOC106574506 coding downstream 134593 16344292 ~ 16356805 (+)
LOC110528784 LOC106574508 coding downstream 168191 16378356 ~ 16397842 (+)
LOC118965265 LOC106575416 coding downstream 215541 16425706 ~ 16428378 (+)
G578893 NA non-coding upstream 392 16201512 ~ 16201797 (+)
G578890 NA non-coding upstream 2936 16198946 ~ 16199253 (+)
G578863 NA non-coding upstream 20357 16154281 ~ 16181832 (+)
G578877 NA non-coding upstream 49957 16152019 ~ 16152232 (+)
G578876 NA non-coding upstream 50534 16151436 ~ 16151655 (+)
G578821 NA non-coding downstream 1444 16211609 ~ 16212000 (+)
G578903 NA non-coding downstream 16708 16226873 ~ 16227091 (+)
G578904 NA non-coding downstream 17884 16228049 ~ 16228313 (+)
G578905 NA non-coding downstream 18459 16228624 ~ 16228837 (+)
LOC110528906 LOC106574480 other upstream 197196 15993464 ~ 16004993 (+)
LOC110528902 atr other upstream 703603 15492870 ~ 15498827 (+)
G578389 NA other upstream 737824 15462245 ~ 15464365 (+)
G578031 NA other upstream 945982 15255171 ~ 15256207 (+)
LOC110528786 omp-1 other downstream 247880 16457220 ~ 16463699 (+)
G579566 NA other downstream 608377 16818542 ~ 16819890 (+)
LOC110527403 LOC106574539 other downstream 832244 17042409 ~ 17097924 (+)
si:ch211-181l5.2 cl10a other downstream 1123559 17333699 ~ 17336419 (+)
G580179 NA other downstream 1188628 17398793 ~ 17400533 (+)

Expression


Co-expression Network