Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110528895 |
| gene name | LOC106574495 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 16229804 ~ 16268664 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036982766.1 | False | 6881 | mRNA | 0.43 | 7 | 16229804 | 16268664 |
| XM_036982765.1 | False | 6876 | mRNA | 0.43 | 7 | 16229809 | 16268664 |
| TU660323 | False | 1246 | lncRNA | 0.37 | 1 | 16267414 | 16268659 |
| TU660322 | True | 1166 | lncRNA | 0.37 | 1 | 16267494 | 16268659 |
16,220,000
16,224,000
16,228,000
16,232,000
16,236,000
16,240,000
16,244,000
16,248,000
16,252,000
16,256,000
16,260,000
16,264,000
16,268,000
16,272,000
16,276,000
16,280,000
16,284,000
16,288,000
16,292,000
16,296,000
16,300,000
NC_048571.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528873 | ino1a | coding | upstream | 19639 | 16202189 ~ 16210165 (+) |
| LOC110528882 | LOC106574488 | coding | upstream | 52778 | 16161693 ~ 16177026 (+) |
| LOC110528863 | LOC106575439 | coding | upstream | 87613 | 16124275 ~ 16142191 (+) |
| LOC110528868 | prdm9 | coding | upstream | 131986 | 16078839 ~ 16097818 (+) |
| LOC110528915 | LOC106574584 | coding | upstream | 181756 | 16046065 ~ 16048048 (+) |
| LOC110528905 | LOC106574496 | coding | downstream | 536 | 16269200 ~ 16279190 (+) |
| LOC110528903 | LOC106574506 | coding | downstream | 76094 | 16344292 ~ 16356805 (+) |
| LOC110528784 | LOC106574508 | coding | downstream | 109692 | 16378356 ~ 16397842 (+) |
| LOC118965265 | LOC106575416 | coding | downstream | 157042 | 16425706 ~ 16428378 (+) |
| d2hgdh | LOC106575380 | coding | downstream | 162620 | 16431284 ~ 16435714 (+) |
| G578905 | NA | non-coding | upstream | 967 | 16228624 ~ 16228837 (+) |
| G578904 | NA | non-coding | upstream | 1491 | 16228049 ~ 16228313 (+) |
| G578903 | NA | non-coding | upstream | 2713 | 16226873 ~ 16227091 (+) |
| G578821 | NA | non-coding | upstream | 17804 | 16211609 ~ 16212000 (+) |
| G578893 | NA | non-coding | upstream | 28007 | 16201512 ~ 16201797 (+) |
| G578920 | NA | non-coding | downstream | 12378 | 16281042 ~ 16281272 (+) |
| G578934 | LOC106575386 | non-coding | downstream | 37032 | 16305696 ~ 16309378 (+) |
| G578936 | LOC106574500 | non-coding | downstream | 41557 | 16310221 ~ 16311581 (+) |
| G578977 | LOC106575417 | non-coding | downstream | 130033 | 16398697 ~ 16399098 (+) |
| LOC110528906 | LOC106574480 | other | upstream | 224811 | 15993464 ~ 16004993 (+) |
| LOC110528902 | atr | other | upstream | 731218 | 15492870 ~ 15498827 (+) |
| G578389 | NA | other | upstream | 765439 | 15462245 ~ 15464365 (+) |
| G578031 | NA | other | upstream | 973597 | 15255171 ~ 15256207 (+) |
| LOC110528786 | omp-1 | other | downstream | 189381 | 16457220 ~ 16463699 (+) |
| G579566 | NA | other | downstream | 549878 | 16818542 ~ 16819890 (+) |
| LOC110527403 | LOC106574539 | other | downstream | 773745 | 17042409 ~ 17097924 (+) |
| si:ch211-181l5.2 | cl10a | other | downstream | 1065060 | 17333699 ~ 17336419 (+) |
| G580179 | NA | other | downstream | 1130129 | 17398793 ~ 17400533 (+) |
