Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110528880 |
| gene name | LOC106575386 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 16305681 ~ 16311613 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| SH2 domain-containing adapter protein F-like isoform X2 |
| id | description |
|---|---|
| K23697 | SHB_D_E_F; SH2 domain-containing adapter protein B/D/E/F |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021611050.2 | False | 2825 | mRNA | 0.49 | 9 | 16305681 | 16311612 |
| XM_021611051.2 | True | 2772 | mRNA | 0.49 | 9 | 16305681 | 16311613 |
16,299,000
16,300,000
16,301,000
16,302,000
16,303,000
16,304,000
16,305,000
16,306,000
16,307,000
16,308,000
16,309,000
16,310,000
16,311,000
16,312,000
16,313,000
16,314,000
NC_048571.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528918 | thegl | coding | downstream | 117 | 16301717 ~ 16305564 (-) |
| LOC110528892 | LOC106574497 | coding | downstream | 5770 | 16284327 ~ 16299911 (-) |
| pdcd10b | LOC106574489 | coding | downstream | 112801 | 16179904 ~ 16192880 (-) |
| LOC110528861 | LOC106575437 | coding | downstream | 189179 | 16098139 ~ 16116502 (-) |
| LOC110528908 | LOC106574585 | coding | downstream | 234766 | 16067882 ~ 16070915 (-) |
| LOC110528887 | LOC106574501 | coding | upstream | 5367 | 16316980 ~ 16320794 (-) |
| LOC110528901 | LOC106575418 | coding | upstream | 9513 | 16321126 ~ 16326569 (-) |
| LOC118965264 | LOC106575381 | coding | upstream | 15505 | 16327118 ~ 16333701 (-) |
| LOC118965347 | LOC106574589 | coding | upstream | 89506 | 16401119 ~ 16406055 (-) |
| LOC110528876 | LOC106574510 | coding | upstream | 127039 | 16438652 ~ 16446786 (-) |
| G579129 | NA | non-coding | downstream | 37034 | 16267497 ~ 16268647 (-) |
| G579135 | LOC105019863 | non-coding | downstream | 52091 | 16252983 ~ 16253590 (-) |
| G579179 | NA | non-coding | downstream | 82262 | 16223214 ~ 16223419 (-) |
| G579177 | NA | non-coding | downstream | 89837 | 16215591 ~ 16215844 (-) |
| G579146 | NA | non-coding | downstream | 93382 | 16211609 ~ 16212299 (-) |
| G579221 | NA | non-coding | upstream | 38678 | 16350291 ~ 16397790 (-) |
| G579235 | NA | non-coding | upstream | 41535 | 16353148 ~ 16355245 (-) |
| G579272 | NA | non-coding | upstream | 140466 | 16452079 ~ 16452944 (-) |
| G579273 | NA | non-coding | upstream | 142062 | 16453675 ~ 16453993 (-) |
| G579125 | LOC106574487 | other | downstream | 175364 | 16129493 ~ 16130317 (-) |
| G579102 | NA | other | downstream | 232535 | 16072869 ~ 16073146 (-) |
| G579028 | NA | other | downstream | 342138 | 15897176 ~ 15963543 (-) |
| LOC110495701 | ghsr | other | downstream | 475723 | 15827007 ~ 15830774 (-) |
| G578601 | NA | other | downstream | 678982 | 15626086 ~ 15626699 (-) |
| G579278 | NA | other | upstream | 153329 | 16464942 ~ 16465534 (-) |
| LOC110528867 | LOC106575374 | other | upstream | 248350 | 16559930 ~ 16635251 (-) |
| LOC110527396 | LOC106574529 | other | upstream | 486067 | 16797680 ~ 16800686 (-) |
| G580487 | NA | other | upstream | 1086244 | 17397857 ~ 17400536 (-) |
