Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118965266 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 16683341 ~ 16688245 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005052535.1 | True | 704 | mRNA | 0.38 | 2 | 16683341 | 16688245 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528869 | LOC106574522 | coding | upstream | 11768 | 16663674 ~ 16671573 (+) |
| LOC110528883 | ola1 | coding | upstream | 20292 | 16655086 ~ 16663049 (+) |
| LOC110528859 | LOC106575376 | coding | upstream | 124047 | 16544860 ~ 16559294 (+) |
| LOC110528787 | LOC106575379 | coding | upstream | 145385 | 16510437 ~ 16537956 (+) |
| LOC110528786 | omp-1 | coding | upstream | 219642 | 16457220 ~ 16463699 (+) |
| LOC110528788 | NA | coding | downstream | 59170 | 16747415 ~ 16763145 (+) |
| LOC110528796 | LOC106574532 | coding | downstream | 218454 | 16906699 ~ 16920069 (+) |
| trnak-uuu | NA | coding | downstream | 237425 | 16925670 ~ 16925742 (+) |
| trnak-uuu-2 | NA | coding | downstream | 238971 | 16927216 ~ 16927288 (+) |
| trnak-cuu | NA | coding | downstream | 242022 | 16930267 ~ 16930339 (+) |
| G579385 | NA | non-coding | upstream | 30812 | 16652305 ~ 16652529 (+) |
| G579383 | NA | non-coding | upstream | 35108 | 16647998 ~ 16648233 (+) |
| G579335 | LOC106574517 | non-coding | upstream | 42847 | 16640039 ~ 16640494 (+) |
| G579325 | LOC106574519 | non-coding | upstream | 44044 | 16639068 ~ 16639297 (+) |
| G579389 | NA | non-coding | downstream | 3043 | 16691288 ~ 16692003 (+) |
| G579400 | LOC106574524 | non-coding | downstream | 11344 | 16699589 ~ 16699831 (+) |
| G579404 | LOC106574525 | non-coding | downstream | 19031 | 16707276 ~ 16708204 (+) |
| G579509 | LOC106574571 | non-coding | downstream | 24696 | 16712941 ~ 16713968 (+) |
| G579525 | LOC106575364 | non-coding | downstream | 47429 | 16735674 ~ 16736058 (+) |
| LOC110528915 | LOC106574584 | other | upstream | 635334 | 16046065 ~ 16048048 (+) |
| LOC110528906 | LOC106574480 | other | upstream | 678348 | 15993464 ~ 16004993 (+) |
| LOC110528902 | atr | other | upstream | 1184755 | 15492870 ~ 15498827 (+) |
| G578389 | NA | other | upstream | 1218976 | 15462245 ~ 15464365 (+) |
| G579566 | NA | other | downstream | 130297 | 16818542 ~ 16819890 (+) |
| LOC110527403 | LOC106574539 | other | downstream | 354164 | 17042409 ~ 17097924 (+) |
| si:ch211-181l5.2 | cl10a | other | downstream | 645479 | 17333699 ~ 17336419 (+) |
| G580179 | NA | other | downstream | 710548 | 17398793 ~ 17400533 (+) |
| G580315 | LOC106575303 | other | downstream | 982030 | 17670275 ~ 17680668 (+) |
