LOC110527424 (LOC106575296)


Basic Information

Item Value
gene id LOC110527424
gene name LOC106575296
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 18096457 ~ 18107236 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036982854.1
AAACTTCACGAGCTTTACCTTGGACTTCGGAATTTTATTGCCCCAGCTTTATAACCGACGTTGAGATAATATTTTACAGAAATTATCTTGCGCAGAACTTTATTTTGCACCATTTACACTTCAACAGTTTAGTGGGTAACGTGTTTACTGTCAATGTGATTTTGAATATAAACGGATTCACCACCTTCAAATCGGCAGGATGAATTCCATAGGTAAGGTGGTGTTGGGACTTTTGGGGCTTGCTGTCGTCATCATCTTGATAGCAGTGCCCACGGCAATATATCTGAACGAGGAAAAAGTGACGACTCAGAGGACGTTCACTCTCAGTGATGTCTTCAATAGCTCCATCAGGGCCAGATCCTACAACATGCGCTGGATCTCAGACCACGAGTATCTGCATCAAAAAGACGGTTCAGTCTTCCTTCACAACCTGATTACAGGAAACAACTCAGAATTCCTGAGCAGCATCACATTTGATCAAGTGGCTGCCTCTGATTATGTAGTGTCTGCTGATAAAAGATATGTTGCTTTCAAGAGCAATTGGACTAAGATATGGAGACACTCCTTCACAGCTTCATATTCTCTCTATGATTTGGCAGACTCGACATTTCTCAGTACACCAGACATCCCTCACCGAGTCCATTTGTTTGCATGGGCGCCAATAGGGAACAAAATGGCCTTTGTGTGGGAAAATGATGTCTATGTGAAGACCAGCCCTACTGCTAAGGCCATACAGGTGACCTCCAATGgaaaacacaacaacattttaaaTGGCATCCCAGATTGGGTGTATGAGGAGGAAATGTTCTCTTCTTACGAGGCAATGTGGTGGTCACCTGGAGGGAGGTATCTGGCCTATGCTGAGTTTAACGACACTCTGGTCCAAAACATAGAGTATTCTTGGTATGGGAAGGAACAGTATCCTGACACTGTCATTTTCCCCTATCCTAAGCCTGGTACTCCCAATCCAGTGGTGAAGCTGTTTGTGTATGATACTGTCAACATATCAAACATCACAGAAGTTGTTGTGCCAGCTTCAGTTGGTGCAGGTGATCACTATTTGGCCACAGTCACCTGGGTAACGGATGAACGCATCGCTGTCCAGTGGCAGAAGAGGAGACAGAACGAGCTCCGCTTTCAGATCTACGACTTCAGCATAGTCGGAAACACCTGGATCGAGAATGCGTTAGAGAAACTTGACATGACAAGCAAGACAGGTTGGATTGGACGGTTTTCACCTTCTAATCCTACATTATCGGCAGACAAAGACGGTTTTTACATTGTGATGAGTGACAATAACGGCTATAAACATATTCATCACGTAACAGGTGGCACAGCAACAGCTGTCACCTCGGGGACTTGGGAGGTCATTGACATTTTAAAAGTGACGAGCAACACCATATACTATTCAAGCAACCAATATGGTCACAAGCCAGGAGGGAGAAACGTTTACAAgatCACTCTCGGAGCCACTCCCCCCACCACCCAGTGCCTGACCTGTACCCTGAATGAGGACAGGTGTCAATACAACTCAGCTTACTTCAGCCATGATGCCTCTTTCTTCCGCATGGACTGCTCAGGTCCTGGACTACCTCTGTATACTCTCAGGGACAACAGGGATGCTGGTTCAGAGATGCAGGTTCTTGAGGACAACATGGCTTTAGAAGGCCTTCTGTCTGAGATCCACATGCCCACCATGCGACGCGGCTTCATCAAGCAAGGGGAATTCAATCTTTGGTACCAGATGACCTTGCCTCCTGGATTTGATAAATCCAAGAAATACCCCTTACTTATTGATGTGTATGCAGGGCCTTGCAGTCAGAAAGCAGACTACCGCTACAGGTTAGGCTGGGCTGCATACCTGGCGAGCACGGAGAAGGTCATCGTTGCCAGCTTCGATGGAAGGGGAAGTGGTTACCAAGGTGACAAGCTAATGCACTCCATCTACCGACGTCTGGGAACCTATGAAGTGGAAGATCAGATAACGGCCGCAAAAGAATTCACCAATATGGGCTTTGTCGACAAAGGCAGAATAGCAATTTGGGGTTGGTCCTATGGAGGTTATGTCACATCAATGGTTCTAGGAGCTGGGAGTGGAGTTTTCAAATGTGGAATGGCAGTTGCCCCAGTTTCCAAGTGGGATTATTATGATACAATCTACACAGAACGTTACATGAATCAACCTTCTGAAAATCTTGAATTCTACAAAAACTCCACAGTGACAGCCAGAGCTAAGAACTTCAAATCAGTGCAATACCTTCTGGTCCATGGGACAGCAGATGACAACGTCCATTTTCAGCAAGCTGCTCAGATCTCTGCTGCTCTGGTTGAGGAACAAGTGGACTTTGAGGCTATGTGGTACACGGACAAGGACCATGGTCTTGAtggttcagccaatcagcatgtcTATACCCACATGAGTCACTTCCTCCAGAGGTGCTTCTCGAATGAATGATGCCCAACCTGACGCTTGCCGAACGATAACCAAACTGCTCCAAATTCATTTGGAATTCATTtggacagcaggtagcctagcggttaagaccGTTTGGCCAgttaccaaaaggttgctggtttgaatccccgagccgggTAGGTGAAAAATatgccaatgtgcccttgagcaaggcacttaaccctaattgctcgtGGAAGTAGTTCTGCATAAGAACGTCTACTAAATGATGTAAATCTAATTGAATGTTGTCCTATTTTTTGATCAATTGAGTTGTTTGAGCCAGTACCCAAACATACACTCCAAacgactctcctctctctatacagtTATAAAACAATGACATCAGCAGGATTGATCTATCGTTGTTTGTTCTGAGCCTCACTGCGAGTTATGGGGTTACATTTGAAATGAAGGATGTGATTATATTGAAATACCAAAGAGCTTTGTGAGAACTGATCAGCCAGTGACTAAGCATGTCTGACTTGTATCCATTAAAGGGCCTTGATTTTATTTATGAGGTATCAACATGAATGTCCATACATTATATTGCTTTGTATTTTACATTgtacaaacatactgtatgtttttatAAAGGGAATATTGGAAGACCTTTGtacctacagtgtgtgtgtctactgtttCAATAAAATTGTTTAAATCTA

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0016020 membrane cellular_component
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG:

id description
K01278 DPP4, CD26; dipeptidyl-peptidase 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036982854.1 True 3120 mRNA 0.44 25 18096457 18107236

Neighbor

gene id symbol gene type direction distance location
LOC110527422 LOC106575297 coding upstream 16458 18002333 ~ 18079999 (+)
LOC110528802 LOC106574564 coding upstream 167145 17891955 ~ 17929312 (+)
LOC110527418 LOC106575302 coding upstream 346350 17726890 ~ 17750107 (+)
LOC100136260 LOC100195750 coding upstream 577969 17514236 ~ 17518488 (+)
abcb11b LOC106575306 coding upstream 600252 17484375 ~ 17496205 (+)
gcg2 gcg2 coding downstream 1554 18108790 ~ 18111651 (+)
LOC110528803 adcy10 coding downstream 4479 18111715 ~ 18127563 (+)
LOC110527430 gemin8 coding downstream 95415 18202651 ~ 18204833 (+)
LOC110527431 LOC106575289 coding downstream 98065 18205301 ~ 18242163 (+)
LOC110527437 LOC106575282 coding downstream 297518 18404754 ~ 18495689 (+)
G580822 NA non-coding upstream 63453 18032764 ~ 18033004 (+)
G580809 NA non-coding upstream 90936 18005321 ~ 18005521 (+)
G580803 NA non-coding upstream 108020 17988222 ~ 17988437 (+)
G580802 NA non-coding upstream 108608 17987271 ~ 17987849 (+)
G580781 NA non-coding upstream 120272 17975914 ~ 17976185 (+)
G580851 NA non-coding downstream 15955 18123191 ~ 18123429 (+)
G580877 NA non-coding downstream 62618 18169854 ~ 18170286 (+)
G580896 NA non-coding downstream 87474 18194710 ~ 18195907 (+)
G580897 NA non-coding downstream 89143 18196379 ~ 18196603 (+)
G580365 NA other upstream 279609 17813342 ~ 17816848 (+)
G580315 LOC106575303 other upstream 415789 17670275 ~ 17680668 (+)
G580179 NA other upstream 695924 17398793 ~ 17400533 (+)
si:ch211-181l5.2 cl10a other upstream 762328 17333699 ~ 17336419 (+)
LOC110527403 LOC106574539 other upstream 998533 17042409 ~ 17097924 (+)
G580997 NA other downstream 384991 18492227 ~ 18492909 (+)
G581976 LOC106581475 other downstream 869442 18976678 ~ 18976999 (+)
LOC110528807 LOC106574429 other downstream 1910619 20017855 ~ 20028775 (+)
G583605 NA other downstream 2131675 20238911 ~ 20239797 (+)
G584643 NA other downstream 2973592 21080828 ~ 21082615 (+)

Expression


Co-expression Network