gcg2 (gcg2)


Basic Information

Item Value
gene id gcg2
gene name gcg2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 18108790 ~ 18111651 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036981857.1
CCACAAGGAACCAGGACTGAAGAAGaggatctcactctctctcagacacacattTCTTCTCATCTACCCGCATATTAACAGGAACAATTCTGTCTGCAGGTCACAATGTTTGGCATCCACTCCCTGGCTGGTGTTCTCCTCCTGGTCATCGTACAGAGCAGTTGGCAAGTTCCTTTGCAAGAGGCTGAGGACAACTCAAGCTTAGAGACAGCAGACTCACTATTGGAGGATTTGAGGGGCGTGCCTAACATGAAGAGACAATCCGAGGGAACCTTCTCTAactactacagtaaataccaggAAGAAAGGATGGCTCGGGACTTTCTTCAATGGCTTATGAACTCCaagaggagtggTGCTCCATCCAAACGCCATGCCGATGGGACCTACACCAGCGACGTGAGCACCTACCTACAGGACCAGGCGGCCAAGGACTTTGTTTCCTGGCTCAAATCAGGACCGGCCAGACGAGAATCTGCAGAGGAGAGCATGAATGGCCCAATGAGCAGAAGACATGTAGATGGGAGCTTCACCAGTGACGTGAACAAGGTCCTAGACAGCTTGGCTGCCAAAGAGTATTTACTCTGGGTCATGACCTCCAAACCCTCAGGGAAAAGtaACAAACGTCAAGAAGATCATTGAAAGAAGACAAACGCTTCCTTGTTCAAGAGAAACTTGGATACTGTGCTACAAATGATAAGCCTTGACAAAAACTGAAAGCCATACTAAAAAGCCATACTGCTTAGCATTGTTGTAACGTTGATACAATGTTGGAAATACTTACATTGTTTACTCTACATtatgtgataaaaaaaaaaacagataatgtATTCTTCCTTAACTTTGTGGTGCATTTAGGCATCAAGTTGTCAAATTATACAAATATTTTTCTATAAATTAACATTATTTTCTATATTTGTAATGTTGAAAAAAAGGGAACATGGTAAAAACTCAGATATAATGTGCAAAATTATCTGGTAACATTTGTGTGAATTAGGTTTTTTATTCTATAT
>NM_001124700.1
gatctcactctctctcagacacacattTCTTCTCATCTACCCGCATATTAACAGGAACAAGTCACAATGTTTGGCATCCACTCCCTGGCTGGTGTTCTCCTCCTGGTCATCGTACAGAAGTTGGCAAGTCCTTTGCAAGAGGCTGAGGACAACTCAAGCTTAGAGACAGCAGACTCACTATTGGAGGATTTGAGGGGCGTGCCTAACATGAAGAGACAATCCGAGGGAACCTTCTCTAactactacagtaaataccaggAAGAAAGGATGGCTCGGGACTTTCTTCAATGGCTTATGAACTCCaagaggagtggTGCTCCATCCAAACGCCATGCCGATGGGACCTACACCAGCGACGTGAGCACCTACCTACAGGACCAGGCGGCCAAGGACTTTGTTTCCTGGCTCAAATCAGGACCGGCCAGACGAGAATCTGCAGAGGAGAGCATGAATGGCCCAATGAGCAGAAGACATGTAGATGGGAGCTTCACCAGTGACGTGAACAAGGTCCTAGACAGCTTGGCTGCCAAAGAGTATTTACTCTGGGTCATGACCTCCAAACCCTCAGGGAAAAGtaACAAACGTCAAGAAGATCATTGAAAGAAGACAAACGCTTCCTTGTTCAAGAGAAACTTGGATACTGTGCTACAAATGATAAGCCTTGACAAAAACTGAAAGCCATACTAAAAAGCCATACTGCTTAGCATTGTTGTAACGTTGATACAATGTTGGAAATACTTACATTGTTTACTCTACATtatgtgataaaaaaaaaaacagataatgtATTCTTCCTTAACTTTGTGGTGCATTTAGGCATCAAGTTGTCAAATTATACAAATATTTTTCTATAAATTAACATTATTTTCTATATTTGTAATGTTGAAAAAAAGGGAACATGGTAAAAACTCAGATATAATGTGCAAAATTATCTGGTAACATTTGTGTGAATTAGGTTTTTTATTCTATATGTATCAAAACCTGCTCTGCAAAATTAAACTCTTTCATTGTG

Function

NR:

description
glucagon-2 precursor

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005179 hormone activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036981857.1 False 1013 mRNA 0.42 6 18108790 18111610
NM_001124700.1 True 1012 mRNA 0.41 8 18108817 18111651

Neighbor

gene id symbol gene type direction distance location
LOC110527424 LOC106575296 coding upstream 1554 18096457 ~ 18107236 (+)
LOC110527422 LOC106575297 coding upstream 28791 18002333 ~ 18079999 (+)
LOC110528802 LOC106574564 coding upstream 179478 17891955 ~ 17929312 (+)
LOC110527418 LOC106575302 coding upstream 358683 17726890 ~ 17750107 (+)
LOC100136260 LOC100195750 coding upstream 590302 17514236 ~ 17518488 (+)
LOC110528803 adcy10 coding downstream 64 18111715 ~ 18127563 (+)
LOC110527430 gemin8 coding downstream 91000 18202651 ~ 18204833 (+)
LOC110527431 LOC106575289 coding downstream 93650 18205301 ~ 18242163 (+)
LOC110527437 LOC106575282 coding downstream 293103 18404754 ~ 18495689 (+)
LOC110527438 LOC106575281 coding downstream 411952 18523603 ~ 18581511 (+)
G580822 NA non-coding upstream 75786 18032764 ~ 18033004 (+)
G580809 NA non-coding upstream 103269 18005321 ~ 18005521 (+)
G580803 NA non-coding upstream 120353 17988222 ~ 17988437 (+)
G580802 NA non-coding upstream 120941 17987271 ~ 17987849 (+)
G580781 NA non-coding upstream 132605 17975914 ~ 17976185 (+)
G580851 NA non-coding downstream 11540 18123191 ~ 18123429 (+)
G580877 NA non-coding downstream 58203 18169854 ~ 18170286 (+)
G580896 NA non-coding downstream 83059 18194710 ~ 18195907 (+)
G580897 NA non-coding downstream 84728 18196379 ~ 18196603 (+)
G580365 NA other upstream 291942 17813342 ~ 17816848 (+)
G580315 LOC106575303 other upstream 428122 17670275 ~ 17680668 (+)
G580179 NA other upstream 708257 17398793 ~ 17400533 (+)
si:ch211-181l5.2 cl10a other upstream 774661 17333699 ~ 17336419 (+)
LOC110527403 LOC106574539 other upstream 1010866 17042409 ~ 17097924 (+)
G580997 NA other downstream 380576 18492227 ~ 18492909 (+)
G581976 LOC106581475 other downstream 865027 18976678 ~ 18976999 (+)
LOC110528807 LOC106574429 other downstream 1906204 20017855 ~ 20028775 (+)
G583605 NA other downstream 2127260 20238911 ~ 20239797 (+)
G584643 NA other downstream 2969177 21080828 ~ 21082615 (+)

Expression


Co-expression Network