LOC110527429 (psde)


Basic Information

Item Value
gene id LOC110527429
gene name psde
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 18178455 ~ 18193482 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021608691.2
GAGGGTGGAAGTGATCATCAAGGCGCCGGAAGTACCCAATGTTCTGACGAATTTGTTTTGAATGAGGAATTCTGGCTGATTCATTGTAGCAAGCTAGACTTCAATAGTTATCACACGCGAGTATTCTTTCCAACATTTTTACAGACTGAATAGAAATGGATAGGCTGCTGAGGCTTGGAGGAGGAATGCCTGGACTGGGTCAGGGCCCACCTACAGATGCCCCCGCCGTAGACACTGCAGAGCAGGTGTACATCTCCTCACTGGCACTGCTCAAGATGCTGAAGCACGGGCGTGCCGGTGTGCCCATGGAGGTCATGGGTTTGATGCTGGGCGAGTTTGTGGACGACTACACTGTGCGAGTGATTGACGTGTTCGCCATGCCGCAGTCAGGAACTGGTGTCAGTGTGGAGGCCGTGGACCCCGTCTTCCAAGCTAAAATGTTGGATATGCTTAAGCAGACGGGCAGACCAGAGATGGTGGTGGGCTGGTACCACAGTCACCCCGGGTTTGGCTGCTGGCTGTCAGGCGTTGACATCAACACCCAGCAGAGTTTCGAGGCCCTGTCGGAGAGAGCCGTGGCCGTGGTGGTGGACCCCATCCAGAGCGTCAAAGGAAAGGTTGTTATCGATGCGTTCCGGCTGATCAATGCCAACATGATGGTTCTGGGACACGAGCCCAGGCAAACCACCTCCAACCTGGGGCATCTGAACAAGCCCTCCATCCAGGCTCTGATCCATGGACTGAACAGGCATTACTACTCCATCACCATCAACTACAGGAAAAATGAACTCGAGCAAAAGATGCTGTTGAACCTGCACAAGAAGAGCTGGATGGAGGGCCTGACCCTGCAGGACTACAGCGAGCACTGCAAGCTCAACGAGAACATCGTCAAGGAGATGCTGGAGCTGGCCAAGAACTACAACAAGGCGGTTGAAGAAGAGGATAAGATGACCCCTGAGCAGCTGGCCATCAAGAATGTCGGAAAGCAGGATCCCAAGAGGCACCTGGAGGAGCACGTCGACGTCCTGATGACGTCCAACATTGTTCAGTGCCTAGCCGCCATGTTGGATACTGTGGTCTTTCAGTGAAGCCTCCCCTCCCCCAGCATTTAACTGTTCATATTCTAActctttgtgttttgttttataaaaaataaatgtgtatGAAAGGTA

Function

NR:

description
26S proteasome non-ATPase regulatory subunit 14

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0001878 response to yeast biological_process
GO:0000502 proteasome complex cellular_component
GO:0003984 acetolactate synthase activity molecular_function

KEGG:

id description
K03030 PSMD14, RPN11, POH1; 26S proteasome regulatory subunit N11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021608691.2 True 1172 mRNA 0.52 11 18178455 18193482

Neighbor

gene id symbol gene type direction distance location
LOC110527428 LOC106575293 coding downstream 1503 18173554 ~ 18176952 (-)
LOC110527425 LOC106575295 coding downstream 14453 18123948 ~ 18164002 (-)
LOC110527423 gran coding downstream 88184 18079991 ~ 18090271 (-)
LOC110527421 NA coding downstream 238410 17934794 ~ 17940045 (-)
LOC110527099 LOC106575332 coding downstream 351106 17823526 ~ 17827349 (-)
LOC110528804 mospd2 coding upstream 542 18194024 ~ 18199581 (-)
LOC110527433 LOC106575287 coding upstream 52505 18245987 ~ 18256261 (-)
LOC110527432 tceanc coding upstream 58755 18252237 ~ 18254010 (-)
LOC100170202 NA coding upstream 104036 18244368 ~ 18299083 (-)
LOC110527434 prps2 coding upstream 106909 18300391 ~ 18311994 (-)
G581136 NA non-coding downstream 55958 18121847 ~ 18122497 (-)
G581135 NA non-coding downstream 57417 18120246 ~ 18121038 (-)
G581134 adcy10 non-coding downstream 59530 18118636 ~ 18118925 (-)
G581125 NA non-coding downstream 70377 18107874 ~ 18108078 (-)
G581124 NA non-coding downstream 70586 18107594 ~ 18107869 (-)
LOC110527435 LOC106574410 non-coding upstream 191230 18384671 ~ 18401796 (-)
G581257 NA non-coding upstream 193813 18387295 ~ 18388151 (-)
G581258 NA non-coding upstream 196434 18389916 ~ 18391076 (-)
G581089 LOC106575297 other downstream 135075 18042927 ~ 18043380 (-)
G580487 NA other downstream 777919 17397857 ~ 17400536 (-)
LOC110527396 LOC106574529 other downstream 1377769 16797680 ~ 16800686 (-)
LOC110528867 LOC106575374 other downstream 1617310 16559930 ~ 16635251 (-)
G579278 NA other downstream 1712921 16464942 ~ 16465534 (-)
G581174 LOC101077481 other upstream 23676 18217158 ~ 18235038 (-)
G583661 NA other upstream 2022167 20215649 ~ 20249985 (-)
otos2 LOC106575250 other upstream 2579385 20772867 ~ 20778065 (-)
LOC110527470 LOC103366558 other upstream 2645006 20838415 ~ 20839399 (-)
G585240 LOC106575179 other upstream 3227972 21421454 ~ 21424585 (-)

Expression


Co-expression Network