LOC110527434 (prps2)


Basic Information

Item Value
gene id LOC110527434
gene name prps2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 18300391 ~ 18311994 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021608699.2
TTCCGCTATACCATGCAAACACTGTTCTCACTTCCTTTTCAGTTTTTAGGTGTCCTGTCGTGCTGATCTGCTATGCGTGGGCTACAGCGATAATAAGTTAACTTGTTAGCTAACTTGCCCCTTGAGGGATAATTGTTGCATCCAAAATCTCCTACTCACATAACCAAATTGCACATAAATATTTAGGACATGCCAAACATCGTGCTTTTCAGCGGGAGCTCCCACCAAGACCTGTCACAAAAAGTGGCTGATCGCCTAGGACTGGAATTGGGGAAAGTGATAACGAAGAAATTCTCCAACCAAGAAACATGCGTGGAGATCGGGGAGAGCGTGCGCGGCGAGGACGTCTACATTGTGCAGAGCGGCTGCGGCGAGATCAACGACAACCTGATGGAGCTGCTGATCATGATTAACGCGTGCAAGATCGCCTCGTCGTCCCGCGTCACCGCTGTCATCCCCTGCTTCCCCTACGCCCGGCAGGACAAAAAAGACAAGAGTCGTGCTCCTATCTCAGCCAAGCTGGTGGCCAACATGCTGTCTGTAGCTGGCGCCGACCACATCATTACAATGGACCTCCACGCTTCACAGATCCAGGGATTCTTCGACATCGCCGTGGACAACCTGTATGCGGAGCCCGCGGTCCTCCAGTGGATCCGGGAGAACATTCCAGAGTGGAAGAACAGTTGCATTGTGTCCCCTGACGCTGGAGGAGCCAAACGAGTGACCTCCATCGCTGACCGTCTGAATGTGGAGTTTGCCCTCATCCACAAAGAGAGGAAGAAGGCCAACGAGGTGGACCGCATGGTCCTGGTCGGAGACGTGAAGGACCGCGTGGCCATCCTGGTCGACGACATGGCCGACACCTGCGGCACCATCTGCAAAGCTGCTGAGAAATTGATTGATGCCGGTGCAATCAAGGTCTACGCTATCCTCACGCACGGCATATTTTCCGGTCCGGCCATCGCACGCATCAACGACGCTCCCTTCGAGGCCGTGGTGGTCACCAACACCATCCCCCAGGAGGAGAAGATGAAGTCTTGCCCAAAGATACAGATCATAGATATAGCCATGATCCTGGCCGAGGCGATCAGGAGAACCCACAATGGCGAGTCGGTGTCCTACCTCTTCAGCCACGTGCCCTTATAAAGGATGGTCACAAGGAAGAGGTCACAATGGCCAATTTAGGCCGTTTCTCTCCTCATGGTCCAATCAGCTCGCACCTTCAGTGGCCACGCCCTCCCGGAAGTCCTTAAACCCTGACGTTTTGGGCCAATTACACGTGAACGGTTCCTAAAGGCCACTCCCACTTTCCCAGCTCCGTTGTTCCGTGTGGAGACCCAAGAAAGAGTATCACCTCTTTGAGACCAGCAAGTTTCTATTTATGCATAATACCATGTTAAGATTTCCTTATTGTTTGTTTTCATTATCATGCTTTGCCACCCAAGGGATCTGGCTGTCATTTTAACCAAAGGTCCATTGCCTAACGATGTTCCTGTTTGTTGTACCTCATTTTTTTGTCCGTTTCACTATAAATGAAAGCATTCCATTGTGTGATGTCACTTCTTGAGTCATCTGACTGTTCTAACCAGCTCTGTGGGGAATCTGCAACGCTGCTGGTTTTAGAGGCAAATTTGTTTCATCAATAGACGCCGATTACGAAATACCAGGGTCCTATTCACTAGACTCAAAACGGTAGCAAACGGGGAGGGACTATCTATCCgatgttttgctacggtgtgtgCTAATCAATGCCACCCAGGGTTGTTTAGTCAtcaacagctgatttttaattcCTTTTAACCAGCAACATTTGGTTAGTGTTGGAGTTCAGTTTTTTTCTCAGAAAGATCCAGAGTAGAGGCTGTATTTGTTCAACCAGCAGATACCTACGTAATGTCTATAAGCGTCTAGAATTGTCTCCTTAAAGTCCCAAAATTGTATCATGGAATTCAACTTGCGATATGAGAAAGAATTGTCGTAAGCATTTCCACATGTTCTGACGTTCTAGTTAAAACACTCTACTTTAGTGCCACATAACAAGGCCAAATCTGATTTGCCATTTTAGTTTCCTTCATTTAGTGTGCACCTGGTGGTGCACTCTAGTGACGGACTGGTGTCATTGCAAGGTCTCATGCTCACCTTTTTGTATTTCTGATCACATTTGCTCCATTACAATCTTGAAATTGCTCATTTACTAAAACTCCCAACACCACTTCTAAACTTTTGCAAAACTGGGCAGCAAGAGATATCTGATAGGATTTCGGCAATCGGATAGGATTAAATTAATAGAAGGGGTATCCACATTCAAGTCAACGATACAATTTATATACATTTAATTCGATCCGATAACTTGGAGGAACTGGGGACAGTCCCTCTATCAGGTTTATCCATCTTTTCAAAGGGTGATTGGTCAAACAACCCTCACCCAAAAGGTCACGAATTTCAAAGTTCTACTTTCCCCATGtcttaagtgtttttttttttgtgtgtgtgttttttccacCAATTACTTGTAGAGTAAGTTCTAATGTAGGAGGGTAACTCCTCAGTGTTCATTTTCCCCTGTTGTATGCTGAGTGTGCTCCAAAGGCTGTTCAGAATGATTTCGCGGATTGGTTGAAAACTGCTGGCGGACAGGCAGCAACACTTTTGTTTTTTACACCACCCGGGTTTTCATTGACAATAAACGTTGACCGTGACATCTA

Function

symbol description
prps2 Enables identical protein binding activity. Predicted to be involved in 5-phosphoribose 1-diphosphate biosynthetic process and purine nucleotide biosynthetic process. Predicted to be part of ribose phosphate diphosphokinase complex. Predicted to be active in cytoplasm.

NR:

description
Ribose-phosphate pyrophosphokinase 2

GO:

id name namespace
GO:0009165 nucleotide biosynthetic process biological_process
GO:0016310 phosphorylation biological_process
GO:0004749 ribose phosphate diphosphokinase activity molecular_function
GO:0016301 kinase activity molecular_function
GO:0000287 magnesium ion binding molecular_function

KEGG:

id description
K00948 PRPS, prsA; ribose-phosphate pyrophosphokinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021608699.2 True 2705 mRNA 0.47 7 18300391 18311994

Neighbor

gene id symbol gene type direction distance location
LOC100170202 NA coding downstream 2327 18244368 ~ 18299083 (-)
LOC110527433 LOC106575287 coding downstream 44130 18245987 ~ 18256261 (-)
LOC110527432 tceanc coding downstream 46381 18252237 ~ 18254010 (-)
LOC110528804 mospd2 coding downstream 100810 18194024 ~ 18199581 (-)
LOC110527429 psde coding downstream 106909 18178455 ~ 18193482 (-)
LOC110528806 frmpd4 coding upstream 3422 18315416 ~ 18383323 (-)
LOC110527435 LOC106574410 coding upstream 72677 18384671 ~ 18401796 (-)
LOC110527440 LOC106575280 coding upstream 750835 19062829 ~ 19068838 (-)
LOC118965376 NA coding upstream 830152 19142146 ~ 19145574 (-)
LOC110527100 NA coding upstream 833763 19145757 ~ 19154599 (-)
G581136 NA non-coding downstream 177894 18121847 ~ 18122497 (-)
G581135 NA non-coding downstream 179353 18120246 ~ 18121038 (-)
G581134 adcy10 non-coding downstream 181466 18118636 ~ 18118925 (-)
G581257 NA non-coding upstream 75301 18387295 ~ 18388151 (-)
G581258 NA non-coding upstream 77922 18389916 ~ 18391076 (-)
G581291 NA non-coding upstream 141394 18453388 ~ 18453682 (-)
G581293 NA non-coding upstream 143047 18455041 ~ 18455333 (-)
G581174 LOC101077481 other downstream 65353 18217158 ~ 18235038 (-)
G581089 LOC106575297 other downstream 257011 18042927 ~ 18043380 (-)
G580487 NA other downstream 899855 17397857 ~ 17400536 (-)
LOC110527396 LOC106574529 other downstream 1499705 16797680 ~ 16800686 (-)
LOC110528867 LOC106575374 other downstream 1739246 16559930 ~ 16635251 (-)
G583661 NA other upstream 1903655 20215649 ~ 20249985 (-)
otos2 LOC106575250 other upstream 2460873 20772867 ~ 20778065 (-)
LOC110527470 LOC103366558 other upstream 2526494 20838415 ~ 20839399 (-)
G585240 LOC106575179 other upstream 3109460 21421454 ~ 21424585 (-)
LOC110527499 LOC106575189 other upstream 3205401 21513832 ~ 21583054 (-)

Expression


Co-expression Network