Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110527100 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 19145757 ~ 19154599 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002474071.2 | True | 581 | mRNA | 0.47 | 3 | 19145757 | 19154599 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118965376 | NA | coding | downstream | 183 | 19142146 ~ 19145574 (-) |
| LOC110527440 | LOC106575280 | coding | downstream | 76919 | 19062829 ~ 19068838 (-) |
| LOC110527435 | LOC106574410 | coding | downstream | 743961 | 18384671 ~ 18401796 (-) |
| LOC110528806 | frmpd4 | coding | downstream | 762434 | 18315416 ~ 18383323 (-) |
| LOC110527434 | prps2 | coding | downstream | 833763 | 18300391 ~ 18311994 (-) |
| LOC110527441 | NA | coding | upstream | 21436 | 19176035 ~ 19181090 (-) |
| LOC110527445 | nfip2 | coding | upstream | 669032 | 19823631 ~ 19832571 (-) |
| LOC110527446 | LOC106574421 | coding | upstream | 697205 | 19851804 ~ 19881758 (-) |
| cfap221 | cfap221 | coding | upstream | 842757 | 19997356 ~ 20017679 (-) |
| LOC110527451 | LOC106575269 | coding | upstream | 874035 | 20028634 ~ 20038269 (-) |
| G582279 | NA | non-coding | downstream | 5225 | 19140290 ~ 19140532 (-) |
| G582017 | NA | non-coding | downstream | 140472 | 19005042 ~ 19005285 (-) |
| G582014 | NA | non-coding | downstream | 142045 | 19003479 ~ 19003712 (-) |
| G582013 | NA | non-coding | downstream | 143178 | 19002321 ~ 19002579 (-) |
| G582006 | NA | non-coding | downstream | 146666 | 18998841 ~ 18999091 (-) |
| G582343 | NA | non-coding | upstream | 67020 | 19221619 ~ 19223542 (-) |
| G582349 | NA | non-coding | upstream | 83039 | 19237638 ~ 19237864 (-) |
| G582422 | NA | non-coding | upstream | 151244 | 19305843 ~ 19306068 (-) |
| G582451 | NA | non-coding | upstream | 171016 | 19325615 ~ 19325952 (-) |
| G582502 | NA | non-coding | upstream | 210702 | 19365301 ~ 19365601 (-) |
| G581174 | LOC101077481 | other | downstream | 910719 | 18217158 ~ 18235038 (-) |
| G581089 | LOC106575297 | other | downstream | 1102377 | 18042927 ~ 18043380 (-) |
| G580487 | NA | other | downstream | 1745221 | 17397857 ~ 17400536 (-) |
| LOC110527396 | LOC106574529 | other | downstream | 2345071 | 16797680 ~ 16800686 (-) |
| LOC110528867 | LOC106575374 | other | downstream | 2584612 | 16559930 ~ 16635251 (-) |
| G583661 | NA | other | upstream | 1061050 | 20215649 ~ 20249985 (-) |
| otos2 | LOC106575250 | other | upstream | 1618268 | 20772867 ~ 20778065 (-) |
| LOC110527470 | LOC103366558 | other | upstream | 1683889 | 20838415 ~ 20839399 (-) |
| G585240 | LOC106575179 | other | upstream | 2266855 | 21421454 ~ 21424585 (-) |
| LOC110527499 | LOC106575189 | other | upstream | 2362796 | 21513832 ~ 21583054 (-) |
