LOC110527502 (LOC106575193)


Basic Information

Item Value
gene id LOC110527502
gene name LOC106575193
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 21737749 ~ 21744000 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036982994.1
CATTTTTGTGGCAGATGCTGGACTTTCCAGCAGCTGTGATATGAAATGGATTTGATATAAATGTACAGCTCTGAATGAGGTCAGCTTTACAACATGAGAAGGCAGGAAATGTGACTTCATGCAAGCGACTTTACAGTAAATATATTGGGGTATAGCATAGCTGTCACTATGGCAACGAGCGCTGTTCCCAGTGACAATCTCCCCACGTATAAGCTGGTCGTGGTGGGGGATGGGGGAGTGGGGAAGAGTGCGCTCACCATTCAGTTCTTTCAGAAGATCTTTGTCCCTGATTACGACCCCACCATCGAGGACTCCTACCTCAAACACACTGAGATTGATGCCCAGTGGGCCATATTGGACGTTCTGGATACAGCAGGCCAAGAGGAGTTCAGTGCTATGAGGGAACAGTACATGAGGACCGGGGACGGGTTCCTCATCGTGTTCTCTGTCACAGACAAGGCCAGCTTTGAACATGTGGACCGCTTCCATCAACTCATCCTCAGGGTGAAGGACCGGTGGGATTTACTACTTAGCTTCCCACTGGTGGCCGTGGCCAGGACAACAGTCATTCCTGCCTTCCGTTATTCAGGCATTCATGCATTTATtactctgtccatccatccattcgtTCATTTATTCATTGTtattttccttattttttttaGGGAATCCTTTCCTATGGTTCTTGTGGCCAACAAAGTGGATCTGCTGCACTTACGTAAAATACCCAGTGATCAGGGGAGGGAGATGGCTAGTAAACAcagtGCAACAGATTCCAGAGAGGAGCCTGAAGAAGAAGAGGAAAACCAAGTGGCGAGCCGACAGGTCCACTGTCTCCCACCGACTGCACTGTGTTGTCCTATGATGGTTTTTTACTTGTACAGCTGCTCCCTACAGGACAGGGGGAAGATGATTTCATTTAGGAGTGTTTACTCTCTACACAGAGTTCCAGGAGGCAGTTTGTACCCTCTATCCCGGCACATGAGTTAGGTGGAAGGGTCAGGTCCAACAGCACAGGAGTTTCCCAGACACGGGATGTGACTGACTCGCCCTAAAAGGACCAGTGGATTAATTTACAGCTCTTCTGGGAATGTGCACTAACTTACTCAACTACATTGCGATAAAGTGGCATCAATACTGCCTTTATCTACCAATGAAGCTCTTTGACAGAGAAACTGGACATATGGGCTCACAAAGATAATCTGTAAATAATTAGGACATACTGTAGCAGGGTCACACAAACATCGTTTTACTAAGAGGTAGGCCTTTAAAACTTGGTCCTTGTTGTTTTTAAATAGCTTTCTTGTTATAGTCCCTATCATTAAGATGGAGGCCATTTAATAAAGCactggaaggagggaggaaacTGAGAACTTTCCCCAGTGAGGGGGAGTATAttagagaggggagtgagaggaggggagaggatatGTCTGTTTGTGTTGGAATCAGTGGGCCTGTCAGACaacagagagaagaagggaaagtgaggaaagagacacagagagagaaagagagattccAAATGGATAGCATCTGGCAAAGGGACTCCAGACATTGTGTTAAAGCCTGGGAGGCAGCCAATGTGTAGCCCCATAATTTCTACATGGAGAACGTCTTTATAATCTCTGAACAAGACTGTCATAGAACTGTATTGTAGCTTATTGAACACACCAAATGTCTTATTTGAATGTACACTTATGAACCGTGACCATTTGGACTTATCAGTGCTCACTGGATGTAGTCGTGCACTTCTCAAAACGCTTTCAACACActattgtggtgtgtgtgtgcgtgcgtgagtgcccTGGATGTGAACATATCCTAGACGATGAAATCAAATTTTTACATGTGAATATTAGATTTCTTTGCTACTATTTCACTATTTATTTTATATAAGTAATGTATTGCTGTGTTATCATTAGTACAAGGCTACCCCAGAGAGGCACAAAGCACAGAGTTTAACTAAGAAATTGATGGAACAAAAGACGTGTAGGCAAAGTATAAATGTGTGTTAATACATTTTGTGTTCTATTATATGTGTACACATCCTGGGTAAACTGGTTTGTCTGGATAAAACCATAATTATAATGAAACAgaa
>XM_036982995.1
CATTTTTGTGGCAGATGCTGGACTTTCCAGCAGCTGTGATATGAAATGGATTTGATATAAATGTACAGCTCTGAATGAGGTCAGCTTTACAACATGAGAAGGCAGGAAATGTGACTTCATGCAAGCGACTTTACAGTAAATATATTGGGGTATAGCATAGCTGTCACTATGGCAACGAGCGCTGTTCCCAGTGACAATCTCCCCACGTATAAGCTGGTCGTGGTGGGGGATGGGGGAGTGGGGAAGAGTGCGCTCACCATTCAGTTCTTTCAGAAGATCTTTGTCCCTGATTACGACCCCACCATCGAGGACTCCTACCTCAAACACACTGAGATTGATGCCCAGTGGGCCATATTGGACGTTCTGGATACAGCAGGCCAAGAGGAGTTCAGTGCTATGAGGGAACAGTACATGAGGACCGGGGACGGGTTCCTCATCGTGTTCTCTGTCACAGACAAGGCCAGCTTTGAACATGTGGACCGCTTCCATCAACTCATCCTCAGGGTGAAGGACCGGTGGGATTTACTACTTAGCTTCCCACTGGTGGCCGTGGCCAGGACAACAGTCATTCCTGCCTTCCGTTATTCAGGCATTCATGCATTTATtactctgtccatccatccattcgtTCATTTATTCATTGTtattttccttattttttttaGGGAATCCTTTCCTATGGTTCTTGTGGCCAACAAAGTGGATCTGCTGCACTTACGTAAAATACCCAGTGATCAGGGGAGGGAGATGGCTAGTAAACAcagtatagctTACATTGAAACCAGTGCAAAGGACCCAGCCATGAATGTTGACAAGGCGTTCCACGAGTTAGTTAGAGTAATCAGGCAACAGATTCCAGAGAGGAGCCTGAAGAAGAAGAGGAAAACCAAGTGGCGAGCCGACAGGTCCACTGTCTCCCACCGACTGCACTGTGTTGTCCTATGATGGTTTTTTACTTGTACAGCTGCTCCCTACAGGACAGGGGGAAGATGATTTCATTTAGGAGTGTTTACTCTCTACACAGAGTTCCAGGAGGCAGTTTGTACCCTCTATCCCGGCACATGAGTTAGGTGGAAGGGTCAGGTCCAACAGCACAGGAGTTTCCCAGACACGGGATGTGACTGACTCGCCCTAAAAGGACCAGTGGATTAATTTACAGCTCTTCTGGGAATGTGCACTAACTTACTCAACTACATTGCGATAAAGTGGCATCAATACTGCCTTTATCTACCAATGAAGCTCTTTGACAGAGAAACTGGACATATGGGCTCACAAAGATAATCTGTAAATAATTAGGACATACTGTAGCAGGGTCACACAAACATCGTTTTACTAAGAGGTAGGCCTTTAAAACTTGGTCCTTGTTGTTTTTAAATAGCTTTCTTGTTATAGTCCCTATCATTAAGATGGAGGCCATTTAATAAAGCactggaaggagggaggaaacTGAGAACTTTCCCCAGTGAGGGGGAGTATAttagagaggggagtgagaggaggggagaggatatGTCTGTTTGTGTTGGAATCAGTGGGCCTGTCAGACaacagagagaagaagggaaagtgaggaaagagacacagagagagaaagagagattccAAATGGATAGCATCTGGCAAAGGGACTCCAGACATTGTGTTAAAGCCTGGGAGGCAGCCAATGTGTAGCCCCATAATTTCTACATGGAGAACGTCTTTATAATCTCTGAACAAGACTGTCATAGAACTGTATTGTAGCTTATTGAACACACCAAATGTCTTATTTGAATGTACACTTATGAACCGTGACCATTTGGACTTATCAGTGCTCACTGGATGTAGTCGTGCACTTCTCAAAACGCTTTCAACACActattgtggtgtgtgtgtgcgtgcgtgagtgcccTGGATGTGAACATATCCTAGACGATGAAATCAAATTTTTACATGTGAATATTAGATTTCTTTGCTACTATTTCACTATTTATTTTATATAAGTAATGTATTGCTGTGTTATCATTAGTACAAGGCTACCCCAGAGAGGCACAAAGCACAGAGTTTAACTAAGAAATTGATGGAACAAAAGACGTGTAGGCAAAGTATAAATGTGTGTTAATACATTTTGTGTTCTATTATATGTGTACACATCCTGGGTAAACTGGTTTGTCTGGATAAAACCATAATTATAATGAAACAgaa
>XM_036982996.1
CATTTTTGTGGCAGATGCTGGACTTTCCAGCAGCTGTGATATGAAATGGATTTGATATAAATGTACAGCTCTGAATGAGGTCAGCTTTACAACATGAGAAGGCAGGAAATGTGACTTCATGCAAGCGACTTTACAGTAAATATATTGGGGTATAGCATAGCTGTCACTATGGCAACGAGCGCTGTTCCCAGTGACAATCTCCCCACGTATAAGCTGGTCGTGGTGGGGGATGGGGGAGTGGGGAAGAGTGCGCTCACCATTCAGTTCTTTCAGAAGATCTTTGTCCCTGATTACGACCCCACCATCGAGGACTCCTACCTCAAACACACTGAGATTGATGCCCAGTGGGCCATATTGGACGTTCTGGATACAGCAGGCCAAGAGGAGTTCAGTGCTATGAGGGAACAGTACATGAGGACCGGGGACGGGTTCCTCATCGTGTTCTCTGTCACAGACAAGGCCAGCTTTGAACATGTGGACCGCTTCCATCAACTCATCCTCAGGGTGAAGGACCGGGAATCCTTTCCTATGGTTCTTGTGGCCAACAAAGTGGATCTGCTGCACTTACGTAAAATACCCAGTGATCAGGGGAGGGAGATGGCTAGTAAACAcagtGCAACAGATTCCAGAGAGGAGCCTGAAGAAGAAGAGGAAAACCAAGTGGCGAGCCGACAGGTCCACTGTCTCCCACCGACTGCACTGTGTTGTCCTATGATGGTTTTTTACTTGTACAGCTGCTCCCTACAGGACAGGGGGAAGATGATTTCATTTAGGAGTGTTTACTCTCTACACAGAGTTCCAGGAGGCAGTTTGTACCCTCTATCCCGGCACATGAGTTAGGTGGAAGGGTCAGGTCCAACAGCACAGGAGTTTCCCAGACACGGGATGTGACTGACTCGCCCTAAAAGGACCAGTGGATTAATTTACAGCTCTTCTGGGAATGTGCACTAACTTACTCAACTACATTGCGATAAAGTGGCATCAATACTGCCTTTATCTACCAATGAAGCTCTTTGACAGAGAAACTGGACATATGGGCTCACAAAGATAATCTGTAAATAATTAGGACATACTGTAGCAGGGTCACACAAACATCGTTTTACTAAGAGGTAGGCCTTTAAAACTTGGTCCTTGTTGTTTTTAAATAGCTTTCTTGTTATAGTCCCTATCATTAAGATGGAGGCCATTTAATAAAGCactggaaggagggaggaaacTGAGAACTTTCCCCAGTGAGGGGGAGTATAttagagaggggagtgagaggaggggagaggatatGTCTGTTTGTGTTGGAATCAGTGGGCCTGTCAGACaacagagagaagaagggaaagtgaggaaagagacacagagagagaaagagagattccAAATGGATAGCATCTGGCAAAGGGACTCCAGACATTGTGTTAAAGCCTGGGAGGCAGCCAATGTGTAGCCCCATAATTTCTACATGGAGAACGTCTTTATAATCTCTGAACAAGACTGTCATAGAACTGTATTGTAGCTTATTGAACACACCAAATGTCTTATTTGAATGTACACTTATGAACCGTGACCATTTGGACTTATCAGTGCTCACTGGATGTAGTCGTGCACTTCTCAAAACGCTTTCAACACActattgtggtgtgtgtgtgcgtgcgtgagtgcccTGGATGTGAACATATCCTAGACGATGAAATCAAATTTTTACATGTGAATATTAGATTTCTTTGCTACTATTTCACTATTTATTTTATATAAGTAATGTATTGCTGTGTTATCATTAGTACAAGGCTACCCCAGAGAGGCACAAAGCACAGAGTTTAACTAAGAAATTGATGGAACAAAAGACGTGTAGGCAAAGTATAAATGTGTGTTAATACATTTTGTGTTCTATTATATGTGTACACATCCTGGGTAAACTGGTTTGTCTGGATAAAACCATAATTATAATGAAACAgaa
>XM_036982997.1
CATTTTTGTGGCAGATGCTGGACTTTCCAGCAGCTGTGATATGAAATGGATTTGATATAAATGTACAGCTCTGAATGAGGTCAGCTTTACAACATGAGAAGGCAGGAAATGTGACTTCATGCAAGCGACTTTACAGTAAATATATTGGGGTATAGCATAGCTGTCACTATGGCAACGAGCGCTGTTCCCAGTGACAATCTCCCCACGTATAAGCTGGTCGTGGTGGGGGATGGGGGAGTGGGGAAGAGTGCGCTCACCATTCAGTTCTTTCAGAAGATCTTTGTCCCTGATTACGACCCCACCATCGAGGACTCCTACCTCAAACACACTGAGATTGATGCCCAGTGGGCCATATTGGACGTTCTGGATACAGCAGGCCAAGAGGAGTTCAGTGCTATGAGGGAACAGTACATGAGGACCGGGGACGGGTTCCTCATCGTGTTCTCTGTCACAGACAAGGCCAGCTTTGAACATGTGGACCGCTTCCATCAACTCATCCTCAGGGTGAAGGACCGGGAATCCTTTCCTATGGTTCTTGTGGCCAACAAAGTGGATCTGCTGCACTTACGTAAAATACCCAGTGATCAGGGGAGGGAGATGGCTAGTAAACAcagtatagctTACATTGAAACCAGTGCAAAGGACCCAGCCATGAATGTTGACAAGGCGTTCCACGAGTTAGTTAGAGTAATCAGGCAACAGATTCCAGAGAGGAGCCTGAAGAAGAAGAGGAAAACCAAGTGGCGAGCCGACAGGTCCACTGTCTCCCACCGACTGCACTGTGTTGTCCTATGATGGTTTTTTACTTGTACAGCTGCTCCCTACAGGACAGGGGGAAGATGATTTCATTTAGGAGTGTTTACTCTCTACACAGAGTTCCAGGAGGCAGTTTGTACCCTCTATCCCGGCACATGAGTTAGGTGGAAGGGTCAGGTCCAACAGCACAGGAGTTTCCCAGACACGGGATGTGACTGACTCGCCCTAAAAGGACCAGTGGATTAATTTACAGCTCTTCTGGGAATGTGCACTAACTTACTCAACTACATTGCGATAAAGTGGCATCAATACTGCCTTTATCTACCAATGAAGCTCTTTGACAGAGAAACTGGACATATGGGCTCACAAAGATAATCTGTAAATAATTAGGACATACTGTAGCAGGGTCACACAAACATCGTTTTACTAAGAGGTAGGCCTTTAAAACTTGGTCCTTGTTGTTTTTAAATAGCTTTCTTGTTATAGTCCCTATCATTAAGATGGAGGCCATTTAATAAAGCactggaaggagggaggaaacTGAGAACTTTCCCCAGTGAGGGGGAGTATAttagagaggggagtgagaggaggggagaggatatGTCTGTTTGTGTTGGAATCAGTGGGCCTGTCAGACaacagagagaagaagggaaagtgaggaaagagacacagagagagaaagagagattccAAATGGATAGCATCTGGCAAAGGGACTCCAGACATTGTGTTAAAGCCTGGGAGGCAGCCAATGTGTAGCCCCATAATTTCTACATGGAGAACGTCTTTATAATCTCTGAACAAGACTGTCATAGAACTGTATTGTAGCTTATTGAACACACCAAATGTCTTATTTGAATGTACACTTATGAACCGTGACCATTTGGACTTATCAGTGCTCACTGGATGTAGTCGTGCACTTCTCAAAACGCTTTCAACACActattgtggtgtgtgtgtgcgtgcgtgagtgcccTGGATGTGAACATATCCTAGACGATGAAATCAAATTTTTACATGTGAATATTAGATTTCTTTGCTACTATTTCACTATTTATTTTATATAAGTAATGTATTGCTGTGTTATCATTAGTACAAGGCTACCCCAGAGAGGCACAAAGCACAGAGTTTAACTAAGAAATTGATGGAACAAAAGACGTGTAGGCAAAGTATAAATGTGTGTTAATACATTTTGTGTTCTATTATATGTGTACACATCCTGGGTAAACTGGTTTGTCTGGATAAAACCATAATTATAATGAAACAgaa

Function

NR:

description
ras-related protein M-Ras-like

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0016020 membrane cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG:

id description
K07831 MRAS; Ras-related protein M-Ras

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036982994.1 False 2101 mRNA 0.44 4 21737749 21744000
XM_036982995.1 False 2181 mRNA 0.44 5 21737749 21744000
XM_036982996.1 False 1951 mRNA 0.44 5 21737749 21744000
XM_036982997.1 True 2031 mRNA 0.44 6 21737749 21744000

Neighbor

gene id symbol gene type direction distance location
LOC110527501 ralbb coding upstream 42555 21689336 ~ 21695194 (+)
LOC110527497 LOC106575187 coding upstream 241738 21454747 ~ 21496011 (+)
LOC110527495 LOC106574258 coding upstream 285633 21443103 ~ 21452116 (+)
LOC110527493 LOC106574257 coding upstream 301414 21433912 ~ 21436335 (+)
LOC110528813 LOC106575179 coding upstream 304610 21404567 ~ 21433139 (+)
LOC100136615 LOC100136615 coding downstream 5340 21749340 ~ 21799872 (+)
LOC110527503 LOC106575196 coding downstream 18128 21762128 ~ 21790179 (+)
sts sts coding downstream 68987 21812987 ~ 21826025 (+)
LOC110527508 LOC106574269 coding downstream 546515 22290515 ~ 22312038 (+)
mxra5a LOC106574270 coding downstream 583571 22327571 ~ 22347037 (+)
G585003 NA non-coding upstream 16311 21680071 ~ 21721438 (+)
G584969 NA non-coding upstream 123147 21614296 ~ 21614602 (+)
G584962 NA non-coding upstream 135585 21601956 ~ 21602164 (+)
G584960 NA non-coding upstream 141315 21596224 ~ 21596434 (+)
G584959 NA non-coding upstream 142064 21595446 ~ 21595685 (+)
G585059 NA non-coding downstream 58607 21802607 ~ 21802851 (+)
G585063 NA non-coding downstream 61889 21805889 ~ 21806302 (+)
G585102 NA non-coding downstream 139877 21883877 ~ 21884502 (+)
G585527 NA non-coding downstream 167601 21911601 ~ 21911880 (+)
G584643 NA other upstream 655134 21080828 ~ 21082615 (+)
G583605 NA other upstream 1497952 20238911 ~ 20239797 (+)
LOC110528807 LOC106574429 other upstream 1716022 20017855 ~ 20028775 (+)
G581976 LOC106581475 other upstream 2760750 18976678 ~ 18976999 (+)
G580997 NA other upstream 3244840 18492227 ~ 18492909 (+)
G585573 NA other downstream 209029 21953029 ~ 21953269 (+)
c7h10orf53 cssa17h10orf53 other downstream 612583 22356500 ~ 22360232 (+)
LOC110527523 stat1-2 other downstream 942489 22684527 ~ 22722539 (+)
G586685 NA other downstream 1266061 23010061 ~ 23015120 (+)
LOC110527540 LOC106533352 other downstream 1867352 23609520 ~ 23621369 (+)

Expression


Co-expression Network