glsa (LOC106575215)


Basic Information

Item Value
gene id glsa
gene name LOC106575215
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 22725279 ~ 22746080 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021608856.2
CCACTAGAACACATTTGAGAATCGTGACTCACTGACTGAACCGTTCTTTACGACCGACACCCAACGCATTTGGAATATATTACTAAACATTTATTATATATCTAGCTAGCTGAGTTATAAACAGCGCCACGATTTAGCTTGATAGGATTGACATGTTACATTTTCGGTCTTCGGTAGTGCTCAAGGAGTTGTTTCAATCTAACCTGAAGCGCCCTTTGACAGGTATCGCCAGAAAGACATCACCATCAGTCGCGTATTGCTTTAGCATCGCCTGTACAGATGTCAGATCCGTGACCAAAGTAAAGTGTCTCCAGCATGCGGTTGGATGGAGAGCTTCGCCATACACTACCAACGCCCATGGAACTCGAAACCTCTCCACCAAGAGCGACGACGGTTCGGTGCCACCGCCAACGGACACCAAAAATGACACCTCCACCAGCAATGAAACCGCCAACAAGGAGGCAGCTGCCGAGAAgagAAGGAAGGCAGGCATCCTGCCCAGTCTGGAGGATTTGCTCTTCTACACCATTGCCGGGGGCGCTGAAAAAATCCCGGCTCACAAATTCACCACAGCGCTGAAAGCCACAGGGCTTCGGACCGGAGACCCCCGGCTGAAGGAATGTATGGAGAACCTGAAAGTCATCATGAAGACCACGTCAGACGGAAACCTGGACCGACACCTCTTCAAGAAGTGTGTCCAGAGCAACATCGTGCTGCTCACCCAGGCCTTCAGGAAGAAGTTTGTTATCCCCGACTTTGTGTCCTTCGCCTCCGAAATCGACGCGCTCTATGAGAATGCCAAAAACCTGGGAGGGGGACAGGTGGCTGACTACATTCCCCAGCTGGCCAGGTTCAGCCCGGACCTCTGGGCCGTGTCCATATGCACTGTGGATGGACAAAGACACACAGCGGGTGACACCAAAGTCCCGTTCTGCCTGCAGTCGTGTGTAAAGCCGCTGAAGTATGCCATCGCCGTGCACGACCACGGGACAGAGTATGTGCACCGTTTCATTGGCAAAGAGCCCAGCGGCCTGCGCTTCAACAAACTATTCCTCAACGAGGAAGATAAACCACATAACCCTATGGTTAACGCCGGTGCTATTGTGTGCACGTCCCTCCTAAAGCAAGGGGCAAGCAATGCTGAGAAATTTGATTATGTCATGAACTTCATGAACAAGCTGGCAGGAAACGAGTATGTGGGTTTCAGCAATGCCACATTCCAGTCAGAGAGGGAGTCTGGAGATCGTAACTTTGCTATCGGCTACTACCTTAAGGAGAAGAAGTGCTTTCCAGAGGGGACAGACATGACCTCCATTTTAGACCTCTACTTCCAGCTGTGCTCCATCGAGGTGACCTGTGAAAGCGCTAGCGTCATGGCAGCCACCCTGGCCAATGGCGGCTTCTGTCCAATCACAGGCGAGCGCGTGCTGGGCCCAGAGGCGGTACGGAACACCCTGAGCCTCATGCACTCCTGCGGCATGTACGACTTCTCGGGACAGTTCGCTTTCCACGTTGGACTTCCAGCTAAGTCGGGCGTGGCAGGGGGCATCCTGCTGGTGGTGCCCAACGTCATGGGTATCATGTGCTGGTCCCCTCCACTGGACAAGCTGGGTAACAGTGTACGAGGAATCCAGTTCTGCACGGATCTGGTGTCCCTTTGCAACTTCCACAACTACGACAACCTGAAGCACTTTGTCAAGAAGCTGGATCCTCGCAGGGAGGGCGGAGACCAGAGGGTGAAGTCGGTCATCAATCTTCTGTTTGCTGCGTACACTGGAGATGTGTCTGCACTGAGGAGGTTTGCTCTGTCTTCCATGGACATGGAGCAGAGGGACTATGACTCCAGGACAGCCCTCCATGTGGCTGCAGCAGAAGGGCATGTGGAGGTGGTCAAGTTCCTGTTGGAGGCATGCAGGGTCAACCCTGTTCCCAAAGACAGGTGGGGTAACACACCGATGGAAGAGGCAGTGCACTTTGGACACCACGACGTTGTGACCATGCTCCAGGACTACAACAACAAGTACAGTCCACCAGGGGGTGCCACTGAGGACAAAGAGAAGGAGATATCAGAGAAGAACATTGATGGCCTACTATGAGCCAACTAATACTCTTATATATCCATTGAAATAAAATAACTAGAACGGACGTTCCCATTGAAATTATATATATGTGACCTGAGCAGCTTGGTCCTTTccagtcattctatttctatgtcccCATTAACTATCCGTGTGTGGTCCCTTTGTCATGTCAGTAGTAGGTCACGTGTATTGTTGATTTTGTATAAAAGTATTGTATTTCTAGTATTTTAAAAAACGACAacgtgtttaaaaaatatatattgaccTTTGACTTTTTCCCGGATGTTTTTTGGGTTGTTTCCTTTCGCTTCGCTTTTTTTATGTCATACTGCTCACTGCACAACTCTCCCTCGGTGTGTCAGCACTATGTGTAATGTATTTTCTACATTTAAGTGCACAAAACATTTCTCTTTATGTACAACATTGTGTAAAACCTGAACGTATCCATAAGATAACGTGTACATTTATGTAACGTGTGTGTATATCCCTGAAAGTAATAATATCAGAGGTAGATGGATTCAGTGTAAATACTATTTAATCTGAAGTGATTCTCACTGGCACAGCTTTTGAAGGAAATTGGTAAAGTCCACACACTGTGCATTAGGCTTAAGTTGGACTATTTATGAGGCAGAATGCGTTAAACTATTCCACACGTTCACAGATCTAGGTAGCCTGGTTGCAAAGCTGTTTGGACTGTATATGGCACTGGCTATACAGgccagacagatctgggaccacagGCTATCTATGGTTTAAGACCTCTGGTCTTTTGATTTAGGCCTAGTAGCTTCATATGAATTGATTGTATGGCATTATGTGGAGTGAGTTTAGTTTTGTTGGTTTGCTATTTGATAGCTAGACATTTTTGCACCTTTTTTCGATTGTTCTATAATCTTATTTTAATTTTGAGTAGAAAGGGGGTTATTTGTTTTAAGTGTCAGCCAAAGCTTTTCTGTATGTTTGCTCCATCTGATAAAAGTCTAGTCGGCGACTTTAAAAAAAAGAACATATATGTGAGCCGCCTCAGGAGCAATACAATACAATTCAACCAGCAGCCATGTGCTCTTTACAGACAGGTTCCCACCTATGCTAAGTCCAATTTTAGGGCAAAACATGACACTGATTTATTACTTCATGGATACAGCAGTGTCAATGGTGTTGCTATGATGTCTTGTCAGATATTTGGTTTTACATGGATTTTATCTTCAGTTATAGGCAGTGCATTAAACTTTAATGAATGTTTTTAGTTTGGAACAACTCCACAACGGTGGACTTTAAATCTTGCCATGCTCACCCAAATGCCTCTTTTGGGTAGAGATAAAATAGTTATCCTTATGGGCCTGTATGTAAGCAGATTCTACACATAACAAGTGGTTCACCTATTGTGCAGATACACATAGTGATTGTTTAACAGAGTGTAAAAGTGTCAAATAAATGAATAAGCGTATACTTGAAAAGTCAGGTTGTTTTGGTGAGAACTGTGTGTATATTTGTTTGTTATTGACTATGGGAGGGACAGCGACTACAAATCTGGTAATGACAAAGGAAATTGCCGTCAAAATCTCAAGCCCTACACCATTGTTCTAAAAGTACCTAAGGCAACTTACTTGatgaatatatatttatattgaaTAACTCATCTCAAGTGTTCAGTGTTGCTTTCATTGGATTTGACTTGACCTTTGTCTCCCCAGTCCCTGTTGCACAGGAAGCCTCGTGTGTATGAGTGTTTATTGTTCCCCTGTGTAGGTGCAGGTCAACTTCAACATTAACTCATTAttttgaatgtaccacaggtgtaTACTGATGTCAGTTTGTTTTCATTCAAGTATATCTGCTTTAGCTGTGTGTTGCAGGCAATGGAGATGTATTTATTTCAATGATCAAACAATAAATAAAGAACTTTAAATATGGA
>XM_021608859.2
GTGCCTCGCTGAAGACTAGAACCAAGAGGGGACACATACATCATTAAGATCTGTGGGAAATTATGACCACTGCCACAGGTCAATGACGTTGCAAGGGGCAAGCAATGCTGAGAAATTTGATTATGTCATGAACTTCATGAACAAGCTGGCAGGAAACGAGTATGTGGGTTTCAGCAATGCCACATTCCAGTCAGAGAGGGAGTCTGGAGATCGTAACTTTGCTATCGGCTACTACCTTAAGGAGAAGAAGTGCTTTCCAGAGGGGACAGACATGACCTCCATTTTAGACCTCTACTTCCAGCTGTGCTCCATCGAGGTGACCTGTGAAAGCGCTAGCGTCATGGCAGCCACCCTGGCCAATGGCGGCTTCTGTCCAATCACAGGCGAGCGCGTGCTGGGCCCAGAGGCGGTACGGAACACCCTGAGCCTCATGCACTCCTGCGGCATGTACGACTTCTCGGGACAGTTCGCTTTCCACGTTGGACTTCCAGCTAAGTCGGGCGTGGCAGGGGGCATCCTGCTGGTGGTGCCCAACGTCATGGGTATCATGTGCTGGTCCCCTCCACTGGACAAGCTGGGTAACAGTGTACGAGGAATCCAGTTCTGCACGGATCTGGTGTCCCTTTGCAACTTCCACAACTACGACAACCTGAAGCACTTTGTCAAGAAGCTGGATCCTCGCAGGGAGGGCGGAGACCAGAGGGTGAAGTCGGTCATCAATCTTCTGTTTGCTGCGTACACTGGAGATGTGTCTGCACTGAGGAGGTTTGCTCTGTCTTCCATGGACATGGAGCAGAGGGACTATGACTCCAGGACAGCCCTCCATGTGGCTGCAGCAGAAGGGCATGTGGAGGTGGTCAAGTTCCTGTTGGAGGCATGCAGGGTCAACCCTGTTCCCAAAGACAGGTGGGGTAACACACCGATGGAAGAGGCAGTGCACTTTGGACACCACGACGTTGTGACCATGCTCCAGGACTACAACAACAAGTACAGTCCACCAGGGGGTGCCACTGAGGACAAAGAGAAGGAGATATCAGAGAAGAACATTGATGGCCTACTATGAGCCAACTAATACTCTTATATATCCATTGAAATAAAATAACTAGAACGGACGTTCCCATTGAAATTATATATATGTGACCTGAGCAGCTTGGTCCTTTccagtcattctatttctatgtcccCATTAACTATCCGTGTGTGGTCCCTTTGTCATGTCAGTAGTAGGTCACGTGTATTGTTGATTTTGTATAAAAGTATTGTATTTCTAGTATTTTAAAAA
>XM_021608860.2
AACCCTATGGTTAACGCCGGTGCTATTGTGTGCACGTCCCTCCTAAAGCATTAAGATCTGTGGGAAATTATGACCACTGCCACAGGTCAATGACGTTGCAAGGGGCAAGCAATGCTGAGAAATTTGATTATGTCATGAACTTCATGAACAAGCTGGCAGGAAACGAGTATGTGGGTTTCAGCAATGCCACATTCCAGTCAGAGAGGGAGTCTGGAGATCGTAACTTTGCTATCGGCTACTACCTTAAGGAGAAGAAGTGCTTTCCAGAGGGGACAGACATGACCTCCATTTTAGACCTCTACTTCCAGCTGTGCTCCATCGAGGTGACCTGTGAAAGCGCTAGCGTCATGGCAGCCACCCTGGCCAATGGCGGCTTCTGTCCAATCACAGGCGAGCGCGTGCTGGGCCCAGAGGCGGTACGGAACACCCTGAGCCTCATGCACTCCTGCGGCATGTACGACTTCTCGGGACAGTTCGCTTTCCACGTTGGACTTCCAGCTAAGTCGGGCGTGGCAGGGGGCATCCTGCTGGTGGTGCCCAACGTCATGGGTATCATGTGCTGGTCCCCTCCACTGGACAAGCTGGGTAACAGTGTACGAGGAATCCAGTTCTGCACGGATCTGGTGTCCCTTTGCAACTTCCACAACTACGACAACCTGAAGCACTTTGTCAAGAAGCTGGATCCTCGCAGGGAGGGCGGAGACCAGAGGGTGAAGTCGGTCATCAATCTTCTGTTTGCTGCGTACACTGGAGATGTGTCTGCACTGAGGAGGTTTGCTCTGTCTTCCATGGACATGGAGCAGAGGGACTATGACTCCAGGACAGCCCTCCATGTGGCTGCAGCAGAAGGGCATGTGGAGGTGGTCAAGTTCCTGTTGGAGGCATGCAGGGTCAACCCTGTTCCCAAAGACAGGTGGGGTAACACACCGATGGAAGAGGCAGTGCACTTTGGACACCACGACGTTGTGACCATGCTCCAGGACTACAACAACAAGTACAGTCCACCAGGGGGTGCCACTGAGGACAAAGAGAAGGAGATATCAGAGAAGAACATTGATGGCCTACTATGAGCCAACTAATACTCTTATATATCCATTGAAATAAAATAACTAGAACGGACGTTCCCATTGAAATTATATATATGTGACCTGAGCAGCTTGGTCCTTTccagtcattctatttctatgtcccCATTAACTATCCGTGTGTGGTCCCTTTGTCATGTCAGTAGTAGGTCACGTGTATTGTTGATTTTGTATAAAAGTATTGTATTTCTAGTATTTTAAAAA
>XM_021608858.2
CCACTAGAACACATTTGAGAATCGTGACTCACTGACTGAACCGTTCTTTACGACCGACACCCAACGCATTTGGAATATATTACTAAACATTTATTATATATCTAGCTAGCTGAGTTATAAACAGCGCCACGATTTAGCTTGATAGGATTGACATGTTACATTTTCGGTCTTCGGTAGTGCTCAAGGAGTTGTTTCAATCTAACCTGAAGCGCCCTTTGACAGGTATCGCCAGAAAGACATCACCATCAGTCGCGTATTGCTTTAGCATCGCCTGTACAGATGTCAGATCCGTGACCAAAGTAAAGTGTCTCCAGCATGCGGTTGGATGGAGAGCTTCGCCATACACTACCAACGCCCATGGAACTCGAAACCTCTCCACCAAGAGCGACGACGGTTCGGTGCCACCGCCAACGGACACCAAAAATGACACCTCCACCAGCAATGAAACCGCCAACAAGGAGGCAGCTGCCGAGAAGAAGGCAGGCATCCTGCCCAGTCTGGAGGATTTGCTCTTCTACACCATTGCCGGGGGCGCTGAAAAAATCCCGGCTCACAAATTCACCACAGCGCTGAAAGCCACAGGGCTTCGGACCGGAGACCCCCGGCTGAAGGAATGTATGGAGAACCTGAAAGTCATCATGAAGACCACGTCAGACGGAAACCTGGACCGACACCTCTTCAAGAAGTGTGTCCAGAGCAACATCGTGCTGCTCACCCAGGCCTTCAGGAAGAAGTTTGTTATCCCCGACTTTGTGTCCTTCGCCTCCGAAATCGACGCGCTCTATGAGAATGCCAAAAACCTGGGAGGGGGACAGGTGGCTGACTACATTCCCCAGCTGGCCAGGTTCAGCCCGGACCTCTGGGCCGTGTCCATATGCACTGTGGATGGACAAAGACACACAGCGGGTGACACCAAAGTCCCGTTCTGCCTGCAGTCGTGTGTAAAGCCGCTGAAGTATGCCATCGCCGTGCACGACCACGGGACAGAGTATGTGCACCGTTTCATTGGCAAAGAGCCCAGCGGCCTGCGCTTCAACAAACTATTCCTCAACGAGGAAGATAAACCACATAACCCTATGGTTAACGCCGGTGCTATTGTGTGCACGTCCCTCCTAAAGCAAGGGGCAAGCAATGCTGAGAAATTTGATTATGTCATGAACTTCATGAACAAGCTGGCAGGAAACGAGTATGTGGGTTTCAGCAATGCCACATTCCAGTCAGAGAGGGAGTCTGGAGATCGTAACTTTGCTATCGGCTACTACCTTAAGGAGAAGAAGTGCTTTCCAGAGGGGACAGACATGACCTCCATTTTAGACCTCTACTTCCAGCTGTGCTCCATCGAGGTGACCTGTGAAAGCGCTAGCGTCATGGCAGCCACCCTGGCCAATGGCGGCTTCTGTCCAATCACAGGCGAGCGCGTGCTGGGCCCAGAGGCGGTACGGAACACCCTGAGCCTCATGCACTCCTGCGGCATGTACGACTTCTCGGGACAGTTCGCTTTCCACGTTGGACTTCCAGCTAAGTCGGGCGTGGCAGGGGGCATCCTGCTGGTGGTGCCCAACGTCATGGGTATCATGTGCTGGTCCCCTCCACTGGACAAGCTGGGTAACAGTGTACGAGGAATCCAGTTCTGCACGGATCTGGTGTCCCTTTGCAACTTCCACAACTACGACAACCTGAAGCACTTTGTCAAGAAGCTGGATCCTCGCAGGGAGGGCGGAGACCAGAGGGTGAAGTCGGTCATCAATCTTCTGTTTGCTGCGTACACTGGAGATGTGTCTGCACTGAGGAGGTTTGCTCTGTCTTCCATGGACATGGAGCAGAGGGACTATGACTCCAGGACAGCCCTCCATGTGGCTGCAGCAGAAGGGCATGTGGAGGTGGTCAAGTTCCTGTTGGAGGCATGCAGGGTCAACCCTGTTCCCAAAGACAGGTGGGGTAACACACCGATGGAAGAGGCAGTGCACTTTGGACACCACGACGTTGTGACCATGCTCCAGGACTACAACAACAAGTACAGTCCACCAGGGGGTGCCACTGAGGACAAAGAGAAGGAGATATCAGAGAAGAACATTGATGGCCTACTATGAGCCAACTAATACTCTTATATATCCATTGAAATAAAATAACTAGAACGGACGTTCCCATTGAAATTATATATATGTGACCTGAGCAGCTTGGTCCTTTccagtcattctatttctatgtcccCATTAACTATCCGTGTGTGGTCCCTTTGTCATGTCAGTAGTAGGTCACGTGTATTGTTGATTTTGTATAAAAGTATTGTATTTCTAGTATTTTAAAAA

Function

NR:

description
glutaminase kidney isoform, mitochondrial-like isoform X2

GO: NA

KEGG:

id description
K01425 glsA, GLS; glutaminase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021608856.2 False 3996 mRNA 0.45 17 22725279 22746080
XM_021608859.2 False 1282 mRNA 0.50 12 22726960 22735701
XM_021608860.2 False 1289 mRNA 0.50 12 22726960 22736969
XM_021608858.2 True 2309 mRNA 0.51 17 22726960 22746080

Neighbor

gene id symbol gene type direction distance location
mstn2a mstn2a coding downstream 45327 22678448 ~ 22679952 (-)
stat1-2 stat1-2 coding downstream 57177 22638090 ~ 22668102 (-)
LOC110527522 LOC106575212 coding downstream 105031 22609884 ~ 22620248 (-)
plcd4a LOC106575211 coding downstream 115810 22587846 ~ 22609469 (-)
fam207a cu070 coding downstream 137611 22563281 ~ 22587668 (-)
LOC110527525 clcc1 coding upstream 1530 22747610 ~ 22768921 (-)
LOC110527526 LOC106575217 coding upstream 41477 22787557 ~ 22792363 (-)
LOC110527527 LOC106575218 coding upstream 51844 22797924 ~ 22807497 (-)
LOC110527529 ngl1 coding upstream 61596 22807676 ~ 22812906 (-)
ahr1b ahr1b coding upstream 86219 22832299 ~ 22908138 (-)
G586485 NA non-coding downstream 844 22723870 ~ 22724435 (-)
G586541 NA non-coding downstream 21404 22687699 ~ 22703875 (-)
G586543 NA non-coding downstream 33161 22691681 ~ 22692118 (-)
G586539 NA non-coding downstream 39455 22685565 ~ 22685824 (-)
G586522 NA non-coding downstream 100726 22620999 ~ 22624553 (-)
G586570 NA non-coding upstream 27327 22773407 ~ 22773606 (-)
G586574 NA non-coding upstream 33962 22780042 ~ 22780263 (-)
G586577 NA non-coding upstream 48602 22794682 ~ 22794926 (-)
G586414 LOC106574278 other downstream 254761 22463208 ~ 22470518 (-)
LOC110527506 LOC106575199 other downstream 630940 22089741 ~ 22163995 (-)
LOC110527499 LOC106575189 other downstream 1206406 21513832 ~ 21583054 (-)
G585240 LOC106575179 other downstream 1300694 21421454 ~ 21424585 (-)
G586878 NA other upstream 338410 23084490 ~ 23087137 (-)
LOC110527533 s100b other upstream 415814 23161894 ~ 23165209 (-)
G587242 NA other upstream 628932 23375012 ~ 23377701 (-)
G588987 NA other upstream 2082408 24828488 ~ 24828700 (-)

Expression


Co-expression Network