Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118965272 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 23327046 ~ 23329616 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: von Willebrand factor D and EGF domain-containing protein-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005052555.1 | True | 623 | mRNA | 0.39 | 3 | 23327046 | 23329616 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527539 | LOC106575227 | coding | downstream | 6489 | 23317589 ~ 23320557 (-) |
| LOC110527533 | s100b | coding | downstream | 162340 | 23161894 ~ 23165209 (-) |
| LOC110527532 | LOC106575221 | coding | downstream | 193402 | 23106642 ~ 23133644 (-) |
| LOC118965271 | NA | coding | downstream | 228436 | 23065989 ~ 23098610 (-) |
| LOC118965270 | NA | coding | downstream | 273953 | 23048031 ~ 23053093 (-) |
| LOC110528816 | LOC106575230 | coding | upstream | 63506 | 23392907 ~ 23552928 (-) |
| LOC110527541 | LOC106575232 | coding | upstream | 528892 | 23858508 ~ 23934010 (-) |
| LOC110527544 | LOC106574304 | coding | upstream | 1069248 | 24394807 ~ 24447012 (-) |
| LOC110527545 | LOC106575074 | coding | upstream | 1133472 | 24463088 ~ 24467224 (-) |
| LOC110527546 | fstl1 | coding | upstream | 1138226 | 24467842 ~ 24492424 (-) |
| G587186 | NA | non-coding | downstream | 60249 | 23266592 ~ 23266797 (-) |
| G587174 | NA | non-coding | downstream | 76832 | 23249957 ~ 23250214 (-) |
| G587004 | NA | non-coding | downstream | 84477 | 23242330 ~ 23242569 (-) |
| G586908 | NA | non-coding | downstream | 181801 | 23144981 ~ 23145245 (-) |
| G586890 | NA | non-coding | downstream | 222573 | 23104177 ~ 23104473 (-) |
| G587342 | NA | non-coding | upstream | 219162 | 23548778 ~ 23549113 (-) |
| G587393 | NA | non-coding | upstream | 236182 | 23565798 ~ 23605412 (-) |
| G587446 | LOC100136012 | non-coding | upstream | 298501 | 23628117 ~ 23628388 (-) |
| G587456 | NA | non-coding | upstream | 306794 | 23636410 ~ 23636776 (-) |
| G586878 | NA | other | downstream | 239909 | 23084490 ~ 23087137 (-) |
| LOC110527529 | ngl1 | other | downstream | 514543 | 22807676 ~ 22812906 (-) |
| LOC110527522 | LOC106575212 | other | downstream | 706930 | 22609884 ~ 22620248 (-) |
| G586414 | LOC106574278 | other | downstream | 856528 | 22463208 ~ 22470518 (-) |
| G587242 | NA | other | upstream | 45396 | 23375012 ~ 23377701 (-) |
| G588987 | NA | other | upstream | 1498872 | 24828488 ~ 24828700 (-) |
| G589093 | NA | other | upstream | 1641997 | 24971613 ~ 24979107 (-) |
| G589529 | NA | other | upstream | 1871790 | 25201406 ~ 25278874 (-) |
| LOC110527565 | LOC106575142 | other | upstream | 1919064 | 25215219 ~ 25290844 (-) |
