LOC110527559 (plcc)


Basic Information

Item Value
gene id LOC110527559
gene name plcc
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 24872421 ~ 24902570 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036983046.1
CATTGTTTCCAGGGGGACAGAGTTTGTGGTTGGATAGACAGGAAGTTGCATGTTTCACAGAaggatgtagctagctagctaaaagatAAACCtttatattgaaaaataaatgcgtCTATGACTCTGTGGTGCAAAGACACCAATGTTATTTATGTCTTGAGTTGAAAAGCAACGCGTTGGACCTGTTTGGTAGCATTCCACGTCGTCGGGATCCAGAAatcagGTCTGTAGTATTAGCTGACGGGCCGTGCAAACGGGGCTTGTGAAGGGAACCCACCGTGGTCGGCCGTAGTGCGTTGGCAGCCCTGCTATCCTCCAGACAGCCCTGGTCATGGGGCTGATAGCGTACATCAAGAGCCTGTTCATCGTGCAGCTGCTCGTTGGATTTGTGTTTGTGGTCAGCGGCCTCATCATCAACTTCATTCAGCTCTGCACCTGCGTCCTATGGCCCATTGACAGGCAGCTCTACAGAAAGATCAACACCCGCCTCTCCTACTCCCTCTGGAGCCagcTGGTAATGCTGCTGGAGTGGTGGTCGGGTACAGAATGCACCATATTCGCAGACCAGGCCACGGTGGACAAATTTGGCAAGGAGCACGTCATCATCATCCTCAACCACAACTACGAGATCGACTTCCTCTGTGGCTGGACCATGTGTGAACGCTACGGCGTGcttggaGCTTCAAAGGTCTTGGCCAAGTACGAACTGCTGAAGGTGcctctgattggctggacctggtACTTCCTGGAGATTGTCTTCTGTAAGAGGAagtgggaggaggacagagacactGTGTTCAAAGGCCTGGCCCAGCTAAAGGATTACCCTGAGTTTATGTGGtTCCTCTTGTACTGTGAAGGTACCCGTTTCACACCGAAGAAGCATGAGATCAGTATGGAGGTAGCAGAGAGTAAAGGTCTGCCGAAACTCAAATACCATCTACTGCCCAGAACCAAAGGCTTCACCACAACACTGAGCTGTCTCAAAGGCACAGTATCTGCTGTGTACGACGTGACACTAAATTTCAGAGACAAGAAGGTCCCAACGTTGCACGGCATCGTCAGTGGAAAGAAGTACATGGCCGATATGAATATCAAGCGTTACCCAGTGGAGGAAATCCCAGAGGACGAGAAGGAGTGTGCAACCTGGCTTCACAAGCTCTACCAGCAGAAGGATGCACTGCAGGAGCACTACGAGAAGGAGGGCAGTTTCCCCGGTCCCACCATCAAGCCCCCCCGTCGGCTGTGGACGCTGGTCAACTTCCTCTTCTGGGCCACCCTGCTTCTCACCCCCCTCCTCAACTTCGCCTGTGGGGTGTTTGTCAGTGgctctcccctcctcatcgtCGGCTTCCTGATCTTCTGCATCATCGccTCCATAGCAGTGCGCCGCCTGATCAGTGTGTCTGAGGTGAACAAAACCGGCTCTACTTACGGCAAAATGGAGGGCAAGAAGGAGAACTAGAACTCTTTACGGCAGTCACGCTACGGTCCCTCTACTGTCTACACTCGGTCTGAGCGGTTGTTGCGGTCCCTGCACAGATGCACCCTGTGCAGCCTCCCTCCTGCAAAAATAAGTTAAAACacagggtgggtgggggggggggggatataacTGAATAGACTTTTTAGACGTAAGTTAAAATATTGATTATGAttgtgcattttttttaaatggaattcTTGCAGTTGACTCGCTGTGAATGCATCCTTCCAGTGAGAGGGGGGTGACAGACAGCAGGACTGAATGGTAGATACCAGGGGGTGTATCTCTTTAACACCCAACGCTCCCTGCACCGCAGCTCGTGGTCCCCCCCATCGGTGTCGGTCTCCTCTGCACAGCCTTGTGGTTTCACCTCATCCACATGCGGCAGAATTGTCATGTTTCAGCGGTACCACTTCCTCCAACATGCACCCCACTTCCTGCCACATTAGCCCACCCTAAAGAAGTTTTCTCCACCTATCAAATATCCTCATTTTCTGCTTCAGTATCTCTGACTGGGCCAGCCCAATACCAGTCAGATGTCTCTCTGTAGTTTCAGCAAGGGGCTCTACTGTCTGGAGAAGACAGATTACCCAGCATGCTTTAGCTCCCCACCCTTACCCCCATGAAGGTTGGGTGTGGAGGTGAAGGAATCTTAACGCCTCTGAGCATTTGTTTGTCCGTCTCTTCATGAAACTTGTGCAGAATTCTGACCCAAATGAGATTGAGCATGCTGCTACTCCTCCCGTCCTTCCCAGAAAAGCACAGATGTGACGACCAACCTTGCACCAATGAAATGCAGTATTTAATGTTAATATAAAGCCAGGTTTGGCCTGAGTTGATTTCCAAATTGCTTGTAGATCCCAGAAATACTGATTGTTATAAACCAATAAAACATTTATCGTTTGGTTGCCAATGAATAGACAAAA
>XM_036983047.1
aCTAGGCAGCGCTTTGGCAGGCAGGCTGAGGGAGTGTATCCCTCTCCTTTTTGTTCTGTGTGGGGACAAGTTTCCCACTCTGGTAATGGACGGGCTTGTGAGATGTCATTAGTCTCTTAGGCAAGACTCCAAAGTTCACTCATGTTTACCGAGGAGCGCTGGTGGTTCTCAAGCTCTCTTTCCCACTATTAGTAATTCTCACTCTGTTCCTGTCTGTGGGCAAAGCTAGGGCTTCACACTTTGACAAAACGACTTGCTCTCTCTTCCAGAACAAGGCATAGAAGCAAGGGGAGAGGGTGTGCGGCAGGAGAGGGGGCGAAAACGCTACTTTGGGGACCGCAGCTGTGTTGCAGCAAGGTCTGTAGTATTAGCTGACGGGCCGTGCAAACGGGGCTTGTGAAGGGAACCCACCGTGGTCGGCCGTAGTGCGTTGGCAGCCCTGCTATCCTCCAGACAGCCCTGGTCATGGGGCTGATAGCGTACATCAAGAGCCTGTTCATCGTGCAGCTGCTCGTTGGATTTGTGTTTGTGGTCAGCGGCCTCATCATCAACTTCATTCAGCTCTGCACCTGCGTCCTATGGCCCATTGACAGGCAGCTCTACAGAAAGATCAACACCCGCCTCTCCTACTCCCTCTGGAGCCagcTGGTAATGCTGCTGGAGTGGTGGTCGGGTACAGAATGCACCATATTCGCAGACCAGGCCACGGTGGACAAATTTGGCAAGGAGCACGTCATCATCATCCTCAACCACAACTACGAGATCGACTTCCTCTGTGGCTGGACCATGTGTGAACGCTACGGCGTGcttggaGCTTCAAAGGTCTTGGCCAAGTACGAACTGCTGAAGGTGcctctgattggctggacctggtACTTCCTGGAGATTGTCTTCTGTAAGAGGAagtgggaggaggacagagacactGTGTTCAAAGGCCTGGCCCAGCTAAAGGATTACCCTGAGTTTATGTGGtTCCTCTTGTACTGTGAAGGTACCCGTTTCACACCGAAGAAGCATGAGATCAGTATGGAGGTAGCAGAGAGTAAAGGTCTGCCGAAACTCAAATACCATCTACTGCCCAGAACCAAAGGCTTCACCACAACACTGAGCTGTCTCAAAGGCACAGTATCTGCTGTGTACGACGTGACACTAAATTTCAGAGACAAGAAGGTCCCAACGTTGCACGGCATCGTCAGTGGAAAGAAGTACATGGCCGATATGAATATCAAGCGTTACCCAGTGGAGGAAATCCCAGAGGACGAGAAGGAGTGTGCAACCTGGCTTCACAAGCTCTACCAGCAGAAGGATGCACTGCAGGAGCACTACGAGAAGGAGGGCAGTTTCCCCGGTCCCACCATCAAGCCCCCCCGTCGGCTGTGGACGCTGGTCAACTTCCTCTTCTGGGCCACCCTGCTTCTCACCCCCCTCCTCAACTTCGCCTGTGGGGTGTTTGTCAGTGgctctcccctcctcatcgtCGGCTTCCTGATCTTCTGCATCATCGccTCCATAGCAGTGCGCCGCCTGATCAGTGTGTCTGAGGTGAACAAAACCGGCTCTACTTACGGCAAAATGGAGGGCAAGAAGGAGAACTAGAACTCTTTACGGCAGTCACGCTACGGTCCCTCTACTGTCTACACTCGGTCTGAGCGGTTGTTGCGGTCCCTGCACAGATGCACCCTGTGCAGCCTCCCTCCTGCAAAAATAAGTTAAAACacagggtgggtgggggggggggggatataacTGAATAGACTTTTTAGACGTAAGTTAAAATATTGATTATGAttgtgcattttttttaaatggaattcTTGCAGTTGACTCGCTGTGAATGCATCCTTCCAGTGAGAGGGGGGTGACAGACAGCAGGACTGAATGGTAGATACCAGGGGGTGTATCTCTTTAACACCCAACGCTCCCTGCACCGCAGCTCGTGGTCCCCCCCATCGGTGTCGGTCTCCTCTGCACAGCCTTGTGGTTTCACCTCATCCACATGCGGCAGAATTGTCATGTTTCAGCGGTACCACTTCCTCCAACATGCACCCCACTTCCTGCCACATTAGCCCACCCTAAAGAAGTTTTCTCCACCTATCAAATATCCTCATTTTCTGCTTCAGTATCTCTGACTGGGCCAGCCCAATACCAGTCAGATGTCTCTCTGTAGTTTCAGCAAGGGGCTCTACTGTCTGGAGAAGACAGATTACCCAGCATGCTTTAGCTCCCCACCCTTACCCCCATGAAGGTTGGGTGTGGAGGTGAAGGAATCTTAACGCCTCTGAGCATTTGTTTGTCCGTCTCTTCATGAAACTTGTGCAGAATTCTGACCCAAATGAGATTGAGCATGCTGCTACTCCTCCCGTCCTTCCCAGAAAAGCACAGATGTGACGACCAACCTTGCACCAATGAAATGCAGTATTTAATGTTAATATAAAGCCAGGTTTGGCCTGAGTTGATTTCCAAATTGCTTGTAGATCCCAGAAATACTGATTGTTATAAACCAATAAAACATTTATCGTTTGGTTGCCAATGAATAGACAAAA
>XM_036983045.1
CTAGGCAGCGCTTTGGCAGGCAGGCTGAGGGAGTGTATCCCTCTCCTTTTTGTTCTGTGTGGGGACAAGTTTCCCACTCTGGTAATGGACGGGCTTGTGAGATGTCATTAGTCTCTTAGGCAAGACTCCAAAGTTCACTCATGTTTACCGAGGAGCGCTGGTGGTTCTCAAGCTCTCTTTCCCACTATTAGTAATTCTCACTCTGTTCCTGTCTGTGGGCAAAGCTAGGGCTTCACACTTTGACAAAACGACTTGCTCTCTCTTCCAGAACAAGGTCTGTAGTATTAGCTGACGGGCCGTGCAAACGGGGCTTGTGAAGGGAACCCACCGTGGTCGGCCGTAGTGCGTTGGCAGCCCTGCTATCCTCCAGACAGCCCTGGTCATGGGGCTGATAGCGTACATCAAGAGCCTGTTCATCGTGCAGCTGCTCGTTGGATTTGTGTTTGTGGTCAGCGGCCTCATCATCAACTTCATTCAGCTCTGCACCTGCGTCCTATGGCCCATTGACAGGCAGCTCTACAGAAAGATCAACACCCGCCTCTCCTACTCCCTCTGGAGCCagcTGGTAATGCTGCTGGAGTGGTGGTCGGGTACAGAATGCACCATATTCGCAGACCAGGCCACGGTGGACAAATTTGGCAAGGAGCACGTCATCATCATCCTCAACCACAACTACGAGATCGACTTCCTCTGTGGCTGGACCATGTGTGAACGCTACGGCGTGcttggaGCTTCAAAGGTCTTGGCCAAGTACGAACTGCTGAAGGTGcctctgattggctggacctggtACTTCCTGGAGATTGTCTTCTGTAAGAGGAagtgggaggaggacagagacactGTGTTCAAAGGCCTGGCCCAGCTAAAGGATTACCCTGAGTTTATGTGGtTCCTCTTGTACTGTGAAGGTACCCGTTTCACACCGAAGAAGCATGAGATCAGTATGGAGGTAGCAGAGAGTAAAGGTCTGCCGAAACTCAAATACCATCTACTGCCCAGAACCAAAGGCTTCACCACAACACTGAGCTGTCTCAAAGGCACAGTATCTGCTGTGTACGACGTGACACTAAATTTCAGAGACAAGAAGGTCCCAACGTTGCACGGCATCGTCAGTGGAAAGAAGTACATGGCCGATATGAATATCAAGCGTTACCCAGTGGAGGAAATCCCAGAGGACGAGAAGGAGTGTGCAACCTGGCTTCACAAGCTCTACCAGCAGAAGGATGCACTGCAGGAGCACTACGAGAAGGAGGGCAGTTTCCCCGGTCCCACCATCAAGCCCCCCCGTCGGCTGTGGACGCTGGTCAACTTCCTCTTCTGGGCCACCCTGCTTCTCACCCCCCTCCTCAACTTCGCCTGTGGGGTGTTTGTCAGTGgctctcccctcctcatcgtCGGCTTCCTGATCTTCTGCATCATCGccTCCATAGCAGTGCGCCGCCTGATCAGTGTGTCTGAGGTGAACAAAACCGGCTCTACTTACGGCAAAATGGAGGGCAAGAAGGAGAACTAGAACTCTTTACGGCAGTCACGCTACGGTCCCTCTACTGTCTACACTCGGTCTGAGCGGTTGTTGCGGTCCCTGCACAGATGCACCCTGTGCAGCCTCCCTCCTGCAAAAATAAGTTAAAACacagggtgggtgggggggggggggatataacTGAATAGACTTTTTAGACGTAAGTTAAAATATTGATTATGAttgtgcattttttttaaatggaattcTTGCAGTTGACTCGCTGTGAATGCATCCTTCCAGTGAGAGGGGGGTGACAGACAGCAGGACTGAATGGTAGATACCAGGGGGTGTATCTCTTTAACACCCAACGCTCCCTGCACCGCAGCTCGTGGTCCCCCCCATCGGTGTCGGTCTCCTCTGCACAGCCTTGTGGTTTCACCTCATCCACATGCGGCAGAATTGTCATGTTTCAGCGGTACCACTTCCTCCAACATGCACCCCACTTCCTGCCACATTAGCCCACCCTAAAGAAGTTTTCTCCACCTATCAAATATCCTCATTTTCTGCTTCAGTATCTCTGACTGGGCCAGCCCAATACCAGTCAGATGTCTCTCTGTAGTTTCAGCAAGGGGCTCTACTGTCTGGAGAAGACAGATTACCCAGCATGCTTTAGCTCCCCACCCTTACCCCCATGAAGGTTGGGTGTGGAGGTGAAGGAATCTTAACGCCTCTGAGCATTTGTTTGTCCGTCTCTTCATGAAACTTGTGCAGAATTCTGACCCAAATGAGATTGAGCATGCTGCTACTCCTCCCGTCCTTCCCAGAAAAGCACAGATGTGACGACCAACCTTGCACCAATGAAATGCAGTATTTAATGTTAATATAAAGCCAGGTTTGGCCTGAGTTGATTTCCAAATTGCTTGTAGATCCCAGAAATACTGATTGTTATAAACCAATAAAACATTTATCGTTTGGTTGCCAATGAATAGACAAAA

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016746 transferase activity, transferring acyl groups molecular_function

KEGG:

id description
K13523 AGPAT3_4; lysophosphatidic acid acyltransferase / lysophosphatidylinositol acyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036983046.1 False 2412 mRNA 0.50 10 24872421 24902570
XM_036983047.1 False 2546 mRNA 0.51 11 24889469 24902570
XM_036983045.1 True 2463 mRNA 0.51 10 24889470 24902570

Neighbor

gene id symbol gene type direction distance location
pdxkb LOC106574311 coding upstream 1510 24837284 ~ 24870911 (+)
LOC110527557 pknx1 coding upstream 52117 24811375 ~ 24820304 (+)
itsn1 LOC100286499 coding upstream 71977 24738197 ~ 24800444 (+)
setd4 setd4 coding upstream 139523 24723626 ~ 24732898 (+)
gja5b LOC106574307 coding upstream 288807 24573406 ~ 24583614 (+)
LOC110527561 LOC106575089 coding downstream 95352 24997922 ~ 25115994 (+)
LOC110527563 alg11 coding downstream 296596 25199166 ~ 25278853 (+)
spp2 spp2 coding downstream 300550 25203120 ~ 25213611 (+)
LOC110527567 LOC106575093 coding downstream 399230 25301800 ~ 25312514 (+)
LOC100136274 LOC100136274 coding downstream 412630 25315200 ~ 25321925 (+)
G588720 NA non-coding upstream 36553 24835598 ~ 24835868 (+)
G588717 NA non-coding upstream 39410 24832755 ~ 24833011 (+)
G588716 NA non-coding upstream 42123 24830088 ~ 24830298 (+)
G588687 NA non-coding upstream 69554 24800584 ~ 24802867 (+)
G588676 NA non-coding upstream 161357 24710319 ~ 24711064 (+)
G588764 NA non-coding downstream 19707 24922277 ~ 24922579 (+)
G588765 NA non-coding downstream 21079 24923649 ~ 24924230 (+)
G588766 NA non-coding downstream 23361 24925931 ~ 24926133 (+)
G589081 NA non-coding downstream 65603 24968173 ~ 24968378 (+)
G589105 NA non-coding downstream 85440 24988010 ~ 24988480 (+)
G587660 NA other upstream 1064421 23807722 ~ 23808000 (+)
LOC110527540 LOC106533352 other upstream 1251052 23609520 ~ 23621369 (+)
G586685 NA other upstream 1857301 23010061 ~ 23015120 (+)
LOC110527523 stat1-2 other upstream 2168600 22684527 ~ 22722539 (+)
c7h10orf53 cssa17h10orf53 other upstream 2512194 22356500 ~ 22360232 (+)
G588755 NA other downstream 1761 24904331 ~ 24905581 (+)
G589734 NA other downstream 701035 25587088 ~ 25608606 (+)
G589933 NA other downstream 1101360 26003930 ~ 26025309 (+)
G590936 gart other downstream 1649984 26552554 ~ 26553542 (+)
G590949 LOC106575121 other downstream 1674837 26577407 ~ 26577933 (+)

Expression


Co-expression Network