LOC110527603 (LOC106575136)


Basic Information

Item Value
gene id LOC110527603
gene name LOC106575136
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 28299707 ~ 28306319 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021608998.2
GTTCATATTTCCCATTTGTATCATTGTGACAGGGGGTAGCCCGATAGCTAGCGTTCGGAAATACGTTAGTTTGCAATAAAACGCGAGCACTTCATTGGATTACAATACACTGTTGCGAAAACGTTTTTTATGTTATGTGCTGCTAGCTAGATTAGCGGCTCTCAGTATTTGTGCTTGCAAAGACCCATTTGACAGATGCAATGCATTCACTTGCACAGGAAATTCAAGGATTTTCGaaaacaaaactgaaaaagcaAAGCACTGTTGTGACAACTGTGCTCGGGCGACGGCACATAGAAACAATGGACGACTCCAACGTGCACGAAATTGAGGACCCAGGGATGTCATGCTGTGGATTTGTTCAAGATACCAGTTTGGATCTTCATGTTGGCATTATCAAGCCATTTCTACTGCTCTcatcCCAAGACGCAGCCCAAGATATAGAAACTTTGAAGAAATTTAAGGTTTCACATATATTGAATGTTGCCTATGGTGTTAAAAATAACTTCCCAGATCTATTCAGTTATAAAACAGTGACCATTCTGGATATTCCGGAAACAGACATCACCTCATATATCCAAGAATGTTCACAGTTCATAGATCAAGCCAAAACTGAGAGTGGGGTTGTCCTGGTTCATTGCAATGCTGGAGTCTCCCGTGCTGCCTCAGTATTAATTGGGTACCTCATGTACAGAGAAGGTTTGGGGTTTGATGAAGCATTTGCCATTGTGAAGGAAGCAAGACCCTCTATCCGTCCCAATCCAGGATTTCATGAACAACTGAAAAATTACAAGCCATAGACAACTAACACAATGTAAATGCAAAACAAGAAATATAAATGCAGTGTCTTATGTAGGCCGAACATCCTGAACATGCAAGACACTAATAATAAAATTCAAATCATTACAAA

Function

NR:

description
dual specificity protein phosphatase 19-like

GO: NA

KEGG:

id description
K14165 K14165; atypical dual specificity phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021608998.2 True 910 mRNA 0.40 4 28299707 28306319

Neighbor

gene id symbol gene type direction distance location
LOC110527106 LOC106575135 coding downstream 121868 28176033 ~ 28177839 (-)
LOC110527600 LOC106575132 coding downstream 265403 27890406 ~ 28034304 (-)
ankrd10a ankrd10 coding downstream 446188 27802077 ~ 27853519 (-)
LOC110527596 cars2 coding downstream 503983 27785943 ~ 27795724 (-)
LOC110527597 rab20 coding downstream 514492 27781937 ~ 27785215 (-)
LOC110527604 LOC100196534 coding upstream 274869 28581188 ~ 28615643 (-)
atp5mc3b atp5g3 coding upstream 310809 28617128 ~ 28619938 (-)
lnpk lnpb coding upstream 321070 28627389 ~ 28647053 (-)
LOC110527610 LOC106575067 coding upstream 390761 28697080 ~ 28724256 (-)
LOC110527612 zc3hf coding upstream 483659 28789978 ~ 28811952 (-)
G594207 NA non-coding downstream 9151 28266741 ~ 28290556 (-)
G594126 NA non-coding downstream 126660 28168349 ~ 28173047 (-)
G594138 NA non-coding downstream 175975 28121003 ~ 28123732 (-)
G594026 NA non-coding downstream 345151 27954331 ~ 27954556 (-)
G594018 NA non-coding downstream 353504 27945751 ~ 27946203 (-)
G594251 LOC105007064 non-coding upstream 49086 28355405 ~ 28356279 (-)
G594243 NA non-coding upstream 60842 28367161 ~ 28370155 (-)
G594394 NA non-coding upstream 232631 28538950 ~ 28539207 (-)
G594400 NA non-coding upstream 240421 28546740 ~ 28546940 (-)
G594375 NA non-coding upstream 247473 28553792 ~ 28555033 (-)
G592298 NA other downstream 815927 27482957 ~ 27483780 (-)
G591808 NA other downstream 1133239 27166175 ~ 27166468 (-)
LOC110527590 LOC106575121 other downstream 1714200 26575613 ~ 26585525 (-)
G590443 NA other downstream 2141402 26157993 ~ 26158305 (-)
G589705 NA other downstream 2754289 25544735 ~ 25545418 (-)
G594636 LOC106593246 other upstream 718088 29024407 ~ 29026049 (-)
G594762 NA other upstream 1110536 29416855 ~ 29495130 (-)
G594900 NA other upstream 1261882 29568201 ~ 29593462 (-)
G594905 NA other upstream 1283674 29589993 ~ 29625899 (-)
G594906 NA other upstream 1293312 29599631 ~ 29612736 (-)

Expression


Co-expression Network