atp5mc3b (atp5g3)


Basic Information

Item Value
gene id atp5mc3b
gene name atp5g3
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 28617128 ~ 28619938 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609002.2
TGGGGATCTACGCTGAAACATTTTAACAATCCATTTTCATCTTCCATCTAAAGTCTTTTTGATCCCACACCGACACATAATTTATGTGACTCGTCTAGTTGATTTGAGCAGTCAACACATTAAACTAATATGTACGCCTGTGCGAAGTTCGTCTCTACGCCTGCACTGGTCCGTGCTGGATCCAGGGCATTATACAGACCTCTCTCTGCGTCTGTGCTTTCCCGGCCGGATGTCAGAACAGGAGAGGCTAGCACTGACTTTGTGCCACAGAGTGCCTTTTCTCAGGTAGCACTGCGGGGTTTCCAGACTAGTGCTGTGAGCAGAGACATTGACACAGCAGCCAAGTTCATCGGCGCTGGAGCTGCCACAGTTGGAGTGGCTGGTTCTGGTGCTGGAATCGGGACTGTGTTCGGCAGCCTTATCATCGGCTATGCAAGGAACCCTTCCCTAAAGCAGCAGCTTTTCTCCTATGCTATCCTGGGATTTGCCCTGTCTGAAGCCATGGGTCTGTTCTGCTTGATGGTTGCTTTCCTGATCCTGTTTGCCATGTAAATAGGTCTACTGCAGATGGTGATCATGATTTTGAAACCACAGCTGTGGCTACCTATTTTACTCGAGCAACCCAAATTGTTCAGTGTTGGTCATAGAATTGTACATTTTCCAAGTTTTTGTTGAAGGCTGACAAAAGAAAAGGCATGTATTGTAAAAATGTAACCAATTACAGAATTAAATGCATGTATTTCACTTTAAAATGGTTTAGTTATTTTGTGTGTAGCCCCACTTCCCTGCAAAACATTTTCAAAGGAACACCAGATTTTGGATTAACAAATGCATTTCTCTAGTGTGTGCCCTTCAGCTCAAAACAAAGCATATAGGTATGTTAACTGCAGGTTGATTGCAATCAAGTGAGTTTAAGTACATTTTTACTGTACTTTTGGTTATCATATGCTTTTCTTAATTGTAATAAATATTGAAGTCATCTTTCACTGGTgtaatacaatgtcctcttttgcTATTCCATGAAAAATGATCAACTTGA
>XM_021609001.2
CATCCGGGAATATGATTAAATACGGTTTCGGGCATGCGCAGTTGTTCCTCAGCGCTTCGACCTCTGCAGCCGGTGACTCGTCTAGTTGATTTGAGCAGTCAACACATTAAACTAATATGTACGCCTGTGCGAAGTTCGTCTCTACGCCTGCACTGGTCCGTGCTGGATCCAGGGCATTATACAGACCTCTCTCTGCGTCTGTGCTTTCCCGGCCGGATGTCAGAACAGGAGAGGCTAGCACTGACTTTGTGCCACAGAGTGCCTTTTCTCAGGTAGCACTGCGGGGTTTCCAGACTAGTGCTGTGAGCAGAGACATTGACACAGCAGCCAAGTTCATCGGCGCTGGAGCTGCCACAGTTGGAGTGGCTGGTTCTGGTGCTGGAATCGGGACTGTGTTCGGCAGCCTTATCATCGGCTATGCAAGGAACCCTTCCCTAAAGCAGCAGCTTTTCTCCTATGCTATCCTGGGATTTGCCCTGTCTGAAGCCATGGGTCTGTTCTGCTTGATGGTTGCTTTCCTGATCCTGTTTGCCATGTAAATAGGTCTACTGCAGATGGTGATCATGATTTTGAAACCACAGCTGTGGCTACCTATTTTACTCGAGCAACCCAAATTGTTCAGTGTTGGTCATAGAATTGTACATTTTCCAAGTTTTTGTTGAAGGCTGACAAAAGAAAAGGCATGTATTGTAAAAATGTAACCAATTACAGAATTAAATGCATGTATTTCACTTTAAAATGGTTTAGTTATTTTGTGTGTAGCCCCACTTCCCTGCAAAACATTTTCAAAGGAACACCAGATTTTGGATTAACAAATGCATTTCTCTAGTGTGTGCCCTTCAGCTCAAAACAAAGCATATAGGTATGTTAACTGCAGGTTGATTGCAATCAAGTGAGTTTAAGTACATTTTTACTGTACTTTTGGTTATCATATGCTTTTCTTAATTGTAATAAATATTGAAGTCATCTTTCACTGGTgtaatacaatgtcctcttttgcTATTCCATGAAAAATGATCAACTTGA

Function

symbol description
atp5g3 Predicted to enable ligand-gated channel activity. Predicted to be involved in ATP synthesis coupled proton transport and pore complex assembly. Predicted to act upstream of or within ion transport. Located in mitochondrion. Is expressed in several structures, including alimentary system; genitourinary system; nervous system; respiratory system; and sensory organ. Orthologous to human ATP5MC3 (ATP synthase membrane subunit c locus 3).

NR:

description
ATP synthase F(0) complex subunit C3, mitochondrial-like

GO:

id name namespace
GO:0015986 ATP synthesis coupled proton transport biological_process
GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0008289 lipid binding molecular_function
GO:0015078 proton transmembrane transporter activity molecular_function

KEGG:

id description
K02128 ATPeF0C, ATP5G, ATP9; F-type H+-transporting ATPase subunit c

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609002.2 False 1039 mRNA 0.42 5 28617128 28619846
XM_021609001.2 True 1026 mRNA 0.44 5 28617128 28619938

Neighbor

gene id symbol gene type direction distance location
LOC110527604 LOC100196534 coding downstream 1485 28581188 ~ 28615643 (-)
LOC110527603 LOC106575136 coding downstream 310809 28299707 ~ 28306319 (-)
LOC110527106 LOC106575135 coding downstream 439289 28176033 ~ 28177839 (-)
LOC110527600 LOC106575132 coding downstream 582824 27890406 ~ 28034304 (-)
ankrd10a ankrd10 coding downstream 763609 27802077 ~ 27853519 (-)
lnpk lnpb coding upstream 7451 28627389 ~ 28647053 (-)
LOC110527610 LOC106575067 coding upstream 77142 28697080 ~ 28724256 (-)
LOC110527612 zc3hf coding upstream 170040 28789978 ~ 28811952 (-)
LOC110528825 NA coding upstream 231301 28850876 ~ 28860855 (-)
LOC110528935 LOC106594387 coding upstream 324881 28944819 ~ 28954980 (-)
G594377 NA non-coding downstream 58793 28557230 ~ 28558335 (-)
G594376 NA non-coding downstream 60219 28555894 ~ 28556909 (-)
G594375 NA non-coding downstream 62095 28553792 ~ 28555033 (-)
G594400 NA non-coding downstream 70188 28546740 ~ 28546940 (-)
G594394 NA non-coding downstream 77921 28538950 ~ 28539207 (-)
G594423 NA non-coding upstream 37146 28657084 ~ 28657386 (-)
G594424 NA non-coding upstream 38322 28658260 ~ 28658569 (-)
G594429 NA non-coding upstream 46002 28665940 ~ 28666289 (-)
G594438 NA non-coding upstream 66232 28686170 ~ 28686779 (-)
G594356 NA non-coding upstream 69775 28689713 ~ 28690610 (-)
G592298 NA other downstream 1133348 27482957 ~ 27483780 (-)
G591808 NA other downstream 1450660 27166175 ~ 27166468 (-)
LOC110527590 LOC106575121 other downstream 2031621 26575613 ~ 26585525 (-)
G590443 NA other downstream 2458823 26157993 ~ 26158305 (-)
G589705 NA other downstream 3071710 25544735 ~ 25545418 (-)
G594636 LOC106593246 other upstream 404469 29024407 ~ 29026049 (-)
G594762 NA other upstream 796917 29416855 ~ 29495130 (-)
G594900 NA other upstream 948263 29568201 ~ 29593462 (-)
G594905 NA other upstream 970055 29589993 ~ 29625899 (-)
G594906 NA other upstream 979693 29599631 ~ 29612736 (-)

Expression


Co-expression Network