LOC110527621


Basic Information

Item Value
gene id LOC110527621
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 29087111 ~ 29099411 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609022.2
gctccttcaacaacaacagctagtcAGACACTTCGGTAGCTTTCTAGCAAACATAGCTACAACATTCACGCTCTTTACACTGTTTTTGGTGTATATTAGTCGCTGTGTATTAAACACACTTCTGTCGTATGTACTTGTTGGCCCATTTAATTATATGTTTACGTTGTTTGTCAGCTAGCTGGTTTGCTAAGTTATCTTAGAACTaagctagtcgctaatgctagctagctaacatccccgaccatgagttcaccaagctactctcctcctgataaagaagaggtctgctggacggagaaagaagctttcgtcaaagaggaggaggaagagaaggatgttacaatacaaaaagaagtagagggtgaggctgttaccgtgaaagaagaagagaaagacgtttcagtgaaagaagaggaagacgcgttcagagtgaaagaggaggaggatgttacagtaaaagaagaggaggaagagaaagaggaggaggatgcagtttatggagtgaaagagaagggggagatgaCGGTCAcattggaggaagaagaggagaatgGAGATATGTTTAACACCAgagagatatgggactatcgtggatcctctggggagcctcaacaacctcatgatgctgaagAGGCAGAGatgagtctctccagatcagaacacctcaatAAACACCTGCAGAGATCCACAGGGAAGAGacctcactgctgctctgactgtgggaagagattcacctcCTCATCAGGCATTAAACTTCAtcagagaatccacacaggagagaaaccttatagttgTGGTCAATGTGGAAAGAGGTTTACTCAGTCAACAggcctgatatcacaccagagaatacacacaggagataaaccttatagctgtgatcaatgtgggaagagttttactacatctagcaCTCTGACCTTACAcctgagaatacacacaggagagaaaccgtatagctgtggtcaatgtgggaagaggttTACTCAGTCAACcggcctgatatcacaccagagaatacacacaggagataaaTCTTATTGCTGTGATCAATGTGAGAAGAGTTTTACAACATCTGTCTCTCTGACtttacaccagagaatacacacaggagagaaaccttatagctgtggtcaatgtgggaagagttttggtcaaTCTGGCAATctgacagtgcaccagagaatacacacaggagataaaccttatagctgtgatcaatgtgggaagaggtttaccacatctgtctctctgacagtgcaccagagaatacacacaggagagaaatcttatagctgtggtcaatgtgggaagagttttggtcaaTCTGGCAATctgacagtgcaccagagaatacacacaggagagaaaccttatagctgtgatcaatgtgggaagagttttactacatctggctctctgactttacaccagagaatacacacaggagagaaaccttatagctgtgatcaatgtgggaagagttttactacatctggctctctgactttacaccagagaatacacacaggagagaaatcttatagctgtgatcattgtgggaagagttttactacatctggctctctgacagtgcaccagagaacacacacaggagagaaacctcgtAACTTATAACTGttgtcaatgtgggaagagttttactacatctagccAGCTGACTTCACACACAGGAGAGACATCTCTTAACtataatcaatgtgggaagagatactctgataaaagttctctgattaaacatcagaaaatacatgaaggagttgtttcatgatatcaatgaaataATGACACAATgcagaatgttttaacattgtagtaggagtgttttaatgatgtcacaatgtagaacccTAATCGTTTGCCCCCTGTTCTATTGATTTAAGCATTatatggatattagcctcagggtgaaaatccaggctctgaattgaaagaCTACTATTTATGTGATATAACAAAAGTGACTAACGAAAAAAGAGTTGTGTTACACTTAACAcgttggtgacccacttgaatcaaaatgcaacactgcaaaatgtttaggttttcaatatatccaaactgtttctgcatattggttattgatttgaACATGTTAAAACTGTGTTTTTACATTACGCTATTCCAATTTagcaaaatgtaattgaaaagaaGACTATGCCCCAAGTCCAATATACGTTCGGTTGAAAGTGAAAGTTGAGAAGATGTATTTTCCGGTAGTTTTTTCAATGACTTAAACATCTTAATTTCAATGTTCTTGCAGCCTATACACATGGACACAGTATAATAAATTGGTCTATAATACATTTTATTAACAATCCTACATCACTCCAGCATTTCTTGACAACATTCAAGTGCTAATTGTCTTTTTTCCACTACTGAAGTAACATGACTCAAGTCACTTTATATTTCAAACATTCAGCCTGacaaaatatacatgttttattattccatGCCTCACCATTAAGTGAATTATTGCCAATACATATTAACCTTTCTAGGGCGGAAACCCTCAACAACATTCCGCCGAAAAGGCAGcttgcgaaattcaaaaatattttttacaagtATGTAAccttcacacattaacaagtccaatacagcaaatgaaagataaacatcttgttaatcta

Function

NR:

description
zinc finger protein 501-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609022.2 True 2654 mRNA 0.40 2 29087111 29099411

Neighbor

gene id symbol gene type direction distance location
LOC110527620 NA coding upstream 52505 29026331 ~ 29035347 (+)
LOC110527630 NA coding upstream 73860 29010978 ~ 29013251 (+)
LOC118965280 NA coding upstream 94874 28987346 ~ 28992237 (+)
LOC118965279 LOC106595049 coding upstream 109498 28975483 ~ 28977613 (+)
LOC110527622 LOC106564406 coding upstream 165714 28912640 ~ 28921397 (+)
LOC110527619 LOC106578599 coding downstream 230173 29329584 ~ 29503787 (+)
LOC118965283 NA coding downstream 290206 29389617 ~ 29396184 (+)
LOC118965282 NA coding downstream 314459 29413870 ~ 29442670 (+)
LOC110527623 NA coding downstream 464398 29563350 ~ 29636769 (+)
LOC110527616 NA coding downstream 587005 29686416 ~ 29703056 (+)
G593295 NA non-coding upstream 2581 29084204 ~ 29084530 (+)
G593291 NA non-coding upstream 6313 29080591 ~ 29080798 (+)
G593274 NA non-coding upstream 27536 29044445 ~ 29059575 (+)
G593224 NA non-coding upstream 45144 28949005 ~ 29041967 (+)
G593307 NA non-coding downstream 4824 29104235 ~ 29105025 (+)
G593317 NA non-coding downstream 16495 29115906 ~ 29116723 (+)
G593322 NA non-coding downstream 33586 29132997 ~ 29133869 (+)
G593323 NA non-coding downstream 34952 29134363 ~ 29134915 (+)
G593324 NA non-coding downstream 49161 29148572 ~ 29150344 (+)
G593283 NA other upstream 22519 29059698 ~ 29064592 (+)
G593171 NA other upstream 194686 28892163 ~ 28892425 (+)
G593144 NA other upstream 246028 28835209 ~ 28841083 (+)
plekha3 LOC106575131 other upstream 1212690 27854006 ~ 27874521 (+)
G592445 lig4 other upstream 1379817 27703583 ~ 27707294 (+)
G593513 LOC106610831 other downstream 428616 29528027 ~ 29528910 (+)
G593774 LOC106593940 other downstream 932548 30031959 ~ 30032621 (+)
G596168 NA other downstream 1803768 30903179 ~ 30903887 (+)
G596297 NA other downstream 1982310 31081721 ~ 31082290 (+)

Expression


Co-expression Network