trnar-ccu-13



Basic Information


Item Value
gene id trnar-ccu-13
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 29207373 ~ 29207445 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnar-ccu-13
gccccagtggcctaatggataaggcactggcctcctaagccaggaattgtgggttcaagtcccatctggggtg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnar-ccu-13 True 73 mRNA 0.56 1 29207373 29207445

Neighbor


gene id symbol gene type direction distance location
trnar-ccu-12 NA coding downstream 1919 29205382 ~ 29205454 (-)
trnar-ccu-11 NA coding downstream 3151 29204150 ~ 29204222 (-)
trnar-ccu-10 NA coding downstream 4120 29203181 ~ 29203253 (-)
trnar-ccu-9 NA coding downstream 5073 29202228 ~ 29202300 (-)
LOC110512312 NA coding downstream 7992 29191548 ~ 29199381 (-)
trnar-ccu-14 NA coding upstream 1160 29208605 ~ 29208677 (-)
trnar-ccu-15 NA coding upstream 3214 29210659 ~ 29210731 (-)
trnar-ccu-16 NA coding upstream 5397 29212842 ~ 29212914 (-)
trnar-ccu-17 NA coding upstream 7858 29215303 ~ 29215375 (-)
trnar-ccu-18 NA coding upstream 9092 29216537 ~ 29216609 (-)
G594707 NA non-coding downstream 46794 29160367 ~ 29160579 (-)
G594696 NA non-coding downstream 70391 29136580 ~ 29136982 (-)
G594702 NA non-coding downstream 72001 29135061 ~ 29135372 (-)
LOC110527153 NA non-coding downstream 85680 29118893 ~ 29133938 (-)
G594691 NA non-coding downstream 90650 29115910 ~ 29116723 (-)
trnar-ccu-24 NA non-coding upstream 7610 29215055 ~ 29222643 (-)
trnar-ccu-29 NA non-coding upstream 29592 29237037 ~ 29255482 (-)
LOC110527632 LOC106564416 non-coding upstream 70747 29278113 ~ 29282861 (-)
G594727 NA non-coding upstream 77999 29285444 ~ 29285678 (-)
G594732 NA non-coding upstream 86939 29294384 ~ 29294824 (-)
G594636 LOC106593246 other downstream 181324 29024407 ~ 29026049 (-)
G592298 NA other downstream 1723593 27482957 ~ 27483780 (-)
G591808 NA other downstream 2040905 27166175 ~ 27166468 (-)
LOC110527590 LOC106575121 other downstream 2621866 26575613 ~ 26585525 (-)
G590443 NA other downstream 3049068 26157993 ~ 26158305 (-)
G594762 NA other upstream 209410 29416855 ~ 29495130 (-)
G594900 NA other upstream 360756 29568201 ~ 29593462 (-)
G594905 NA other upstream 382548 29589993 ~ 29625899 (-)
G594906 NA other upstream 392186 29599631 ~ 29612736 (-)
G594968 LOC106591690 other upstream 514231 29721676 ~ 29727490 (-)

Expression



Co-expression Network