trnar-ccu-30



Basic Information


Item Value
gene id trnar-ccu-30
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 29240932 ~ 29241004 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnar-ccu-30
gccccagtggcctaatggataaggcactggcctcctaagccaggaattgtgggttcaagtcccatctggggtg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnar-ccu-30 True 73 mRNA 0.58 1 29240932 29241004

Neighbor


gene id symbol gene type direction distance location
trnar-ccu-29 NA coding downstream 3730 29237037 ~ 29255482 (-)
trnar-ccu-28 NA coding downstream 8506 29232354 ~ 29232426 (-)
trnar-ccu-27 NA coding downstream 15188 29225672 ~ 29225744 (-)
trnar-ccu-26 NA coding downstream 16420 29224440 ~ 29224512 (-)
trnar-ccu-25 NA coding downstream 17374 29223486 ~ 29223558 (-)
trnar-ccu-31 NA coding upstream 1438 29242442 ~ 29242514 (-)
trnar-ccu-32 NA coding upstream 2670 29243674 ~ 29243746 (-)
trnar-ccu-33 NA coding upstream 4736 29245740 ~ 29245812 (-)
trnar-ccu-34 NA coding upstream 8473 29249477 ~ 29249549 (-)
trnar-ccu-35 NA coding upstream 11376 29252380 ~ 29252452 (-)
trnar-ccu-24 NA non-coding downstream 18289 29215055 ~ 29222643 (-)
G594707 NA non-coding downstream 80353 29160367 ~ 29160579 (-)
G594696 NA non-coding downstream 103950 29136580 ~ 29136982 (-)
G594702 NA non-coding downstream 105560 29135061 ~ 29135372 (-)
LOC110527153 NA non-coding downstream 119239 29118893 ~ 29133938 (-)
LOC110527632 LOC106564416 non-coding upstream 37188 29278113 ~ 29282861 (-)
G594727 NA non-coding upstream 44440 29285444 ~ 29285678 (-)
G594732 NA non-coding upstream 53380 29294384 ~ 29294824 (-)
G594733 NA non-coding upstream 54018 29295022 ~ 29295455 (-)
G594735 NA non-coding upstream 55838 29296842 ~ 29297324 (-)
G594636 LOC106593246 other downstream 214883 29024407 ~ 29026049 (-)
G592298 NA other downstream 1757152 27482957 ~ 27483780 (-)
G591808 NA other downstream 2074464 27166175 ~ 27166468 (-)
LOC110527590 LOC106575121 other downstream 2655425 26575613 ~ 26585525 (-)
G590443 NA other downstream 3082627 26157993 ~ 26158305 (-)
G594762 NA other upstream 175851 29416855 ~ 29495130 (-)
G594900 NA other upstream 327197 29568201 ~ 29593462 (-)
G594905 NA other upstream 348989 29589993 ~ 29625899 (-)
G594906 NA other upstream 358627 29599631 ~ 29612736 (-)
G594968 LOC106591690 other upstream 480672 29721676 ~ 29727490 (-)

Expression



Co-expression Network