trnar-ccu-40



Basic Information


Item Value
gene id trnar-ccu-40
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 29262162 ~ 29262234 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnar-ccu-40
gccccagtggcctaatggataaggcactggcctcctaagccaggaattgtgggttcaagtcccatctggggtg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnar-ccu-40 True 73 mRNA 0.58 1 29262162 29262234

Neighbor


gene id symbol gene type direction distance location
trnar-ccu-39 NA coding downstream 3387 29258703 ~ 29258775 (-)
trnar-ccu-38 NA coding downstream 4620 29257470 ~ 29257542 (-)
trnar-ccu-37 NA coding downstream 6409 29255681 ~ 29255753 (-)
trnar-ccu-36 NA coding downstream 8755 29253335 ~ 29253407 (-)
trnar-ccu-35 NA coding downstream 9710 29252380 ~ 29252452 (-)
trnar-ccu-41 NA coding upstream 3109 29265343 ~ 29265415 (-)
trnar-ccu-42 NA coding upstream 4619 29266853 ~ 29266925 (-)
trnar-ccu-43 NA coding upstream 8614 29270848 ~ 29270920 (-)
trnar-ccu-44 NA coding upstream 10125 29272359 ~ 29272431 (-)
trnar-ccu-45 NA coding upstream 13006 29275240 ~ 29275312 (-)
trnar-ccu-29 NA non-coding downstream 6680 29237037 ~ 29255482 (-)
trnar-ccu-24 NA non-coding downstream 39519 29215055 ~ 29222643 (-)
G594707 NA non-coding downstream 101583 29160367 ~ 29160579 (-)
G594696 NA non-coding downstream 125180 29136580 ~ 29136982 (-)
G594702 NA non-coding downstream 126790 29135061 ~ 29135372 (-)
LOC110527632 LOC106564416 non-coding upstream 15958 29278113 ~ 29282861 (-)
G594727 NA non-coding upstream 23210 29285444 ~ 29285678 (-)
G594732 NA non-coding upstream 32150 29294384 ~ 29294824 (-)
G594733 NA non-coding upstream 32788 29295022 ~ 29295455 (-)
G594735 NA non-coding upstream 34608 29296842 ~ 29297324 (-)
G594636 LOC106593246 other downstream 236113 29024407 ~ 29026049 (-)
G592298 NA other downstream 1778382 27482957 ~ 27483780 (-)
G591808 NA other downstream 2095694 27166175 ~ 27166468 (-)
LOC110527590 LOC106575121 other downstream 2676655 26575613 ~ 26585525 (-)
G590443 NA other downstream 3103857 26157993 ~ 26158305 (-)
G594762 NA other upstream 154621 29416855 ~ 29495130 (-)
G594900 NA other upstream 305967 29568201 ~ 29593462 (-)
G594905 NA other upstream 327759 29589993 ~ 29625899 (-)
G594906 NA other upstream 337397 29599631 ~ 29612736 (-)
G594968 LOC106591690 other upstream 459442 29721676 ~ 29727490 (-)

Expression



Co-expression Network