LOC118965283


Basic Information

Item Value
gene id LOC118965283
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 29389617 ~ 29396184 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052568.1
TGAtccattcatccttccatccctcctcagcCTTCCTCTACTCTGAGGACCCAGTGagggtggagctcagtcagagagctgttgaGGGACTGGTTAGGAAGAACACTTCTACAGCCAGAGAGgggcagtcaagaaatggaacagcaaggccacagaacatgacataatcAGAGCTGTGGGAGACCACCTCAAGCTCCTGGTAGAGCCGGGGGTGGTGTTTACCACTCCACCACGCCTTCAGCAGGCTGAAAAATTGGGATTGATACTGTTTTTCATACTAAGACGGACAAAGAGTCTGTTCGTCAGTCACTGGGTTAATTTGTTTTGCATaacgttcaaatcaaatcaagctttatttacacaaaacatttcagacatggatgcaacacaatggcttcaca

Function

NR:

description
telomere length regulation protein TEL2 homolog isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052568.1 True 401 mRNA 0.47 2 29389617 29396184

Neighbor

gene id symbol gene type direction distance location
LOC110527621 NA coding upstream 290206 29087111 ~ 29099411 (+)
LOC110527620 NA coding upstream 355011 29026331 ~ 29035347 (+)
LOC110527630 NA coding upstream 376366 29010978 ~ 29013251 (+)
LOC118965280 NA coding upstream 397380 28987346 ~ 28992237 (+)
LOC118965279 LOC106595049 coding upstream 412004 28975483 ~ 28977613 (+)
LOC118965282 NA coding downstream 17686 29413870 ~ 29442670 (+)
LOC110527623 NA coding downstream 167625 29563350 ~ 29636769 (+)
LOC110527616 NA coding downstream 290232 29686416 ~ 29703056 (+)
LOC118965277 NA coding downstream 398513 29794697 ~ 29804454 (+)
trnak-uuu-3 NA coding downstream 494695 29890879 ~ 29890951 (+)
G593370 NA non-coding upstream 80664 29301795 ~ 29308953 (+)
G593367 NA non-coding upstream 90945 29297976 ~ 29298672 (+)
G593366 NA non-coding upstream 92190 29297128 ~ 29297427 (+)
G593365 NA non-coding upstream 93263 29296117 ~ 29296354 (+)
G593358 NA non-coding upstream 103975 29285437 ~ 29285642 (+)
G593441 NA non-coding downstream 20673 29416857 ~ 29418493 (+)
G593444 NA non-coding downstream 24721 29420905 ~ 29463664 (+)
G593493 NA non-coding downstream 91611 29487795 ~ 29539669 (+)
G593513 LOC106610831 non-coding downstream 131843 29528027 ~ 29528910 (+)
LOC110527619 LOC106578599 other upstream 26266 29329584 ~ 29503787 (+)
G593283 NA other upstream 325025 29059698 ~ 29064592 (+)
G593171 NA other upstream 497192 28892163 ~ 28892425 (+)
G593144 NA other upstream 548534 28835209 ~ 28841083 (+)
plekha3 LOC106575131 other upstream 1515196 27854006 ~ 27874521 (+)
G593774 LOC106593940 other downstream 635775 30031959 ~ 30032621 (+)
G596168 NA other downstream 1506995 30903179 ~ 30903887 (+)
G596297 NA other downstream 1685537 31081721 ~ 31082290 (+)
LOC110531742 LOC106594194 other downstream 2613130 32007023 ~ 32013203 (+)

Expression


Co-expression Network