LOC118965282


Basic Information

Item Value
gene id LOC118965282
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 29413870 ~ 29442670 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052567.1
GGTTTGGACTTGGGCTCGTTCGACATTGCAGCCGACAGTGCAGGTGGCTGCTACCTGACTAatttacaaatcaccttgcatcataaataactacttgTTATTATTTAtaaatcagtcagccagtcaccgtTTACCCACAACGCAGCATGGATTTGATGCTCTCGATCACGGCCAGTGGTTTAATATATGACATAATGGCTTCGCTGCTACGTGTGGGGGATGTCATCTATAACAATGTGGCTGTTCGAAATTCTGTGTCGCTCAAAGCTTTGAGTaattaaccttttttttttacacaattgGCTGGAAAGAGCCAATGCTCCAGGAAGCTTTGTTTCCCCATCACTGCTTTTCAGCATGTTTTCAGTGAATTAGACTACAGGAGTTTTGTAACTTTTTCCACCTTGGCTTACTGTTAGTTGGATTCTAACTGGTCTCCGGTAGTTGGTCTCGCTGACCATAACCGTGCTGGTTGGCTACACTGGTTAGGCTAATAGCTAGTTGGCTAAATAGCtgatgttagctggctggctaagatAACTGCATATAGCTAACATTCTTTGATTGTTGGTTAGATGGTGTTATGTATTTCCAAAACATTGGTTTACTTTAATCACTCAAGTCATGAGCGCAAATTATTGGTTTAGTATGAAGTTCTACATTTTAAGTTATTTCTGTTGTAGTTTACATCACAGGGAATAGGCTGGTCCTCCATATTACTTCACACCTGACTTTATCATTCTTCTGAATTCTGATTGGTTTTATGTAACAACTCCAAAAATAGAACTGTGAGGTGTAACTTTGCAATGGGACTTAaaacatttatatattttatttgctCTTTTAAACTTAACCATTTTATTTATCTCCGTAGCCCACTCACTTTACATTtttagataataaagcatttgacctttccaCTGTGTTAACaatggaggattggttgattttcAGTTTAAGTATTTAAGATGATTGACGAGAAAAGTATCGTCCAACCATCGGGTAACTTGCTTCATGGACATCAAAGGTGAGGGTGAAATTCAGATGTTCACTGCTTGTATTGATGAAGGAGTGGAATCGATGAAgttcctctgctgtcctctggaaTAGAAGGAACACGTCATCAAAGGAAGCCATTTACAGAGCCTGATGAGccttcctctcctctgaggacccagtgagggtggagctcagtcagagagctgttgaGGGACTGGTTAGGAAGAACACTTCTACAGCCAGAGAGGTCACACATGGTTTGGATGgggcagtcaagaaatggaacagcaaggccacagaacatgacataagcaGAGCTGTGGGAGACCACCTCAAGCCCCTGGTAGAGCTGGGGGTGGTGTTTTACCAATCCACCACGCCTTCAGCAGGCTTGAATAGTGGAATTGATCTGTTTGATCCATTTGTTTGTTTCAGTTTTCAGTAGTTGAATCCTGTGATGTATTGTTCATTTCAACATTTTTCATTTTCAACAAATGCACTGGGTTGGTTGAAAAGTGATACTAAACTTACATACCATGCACTATATTGACATATTGAAAGATATACTAAATTTATACTGTTTTTCATACTAAGATGGACCATGCACTATATTGACAAGGTAGAAGATAGCATGAAAAACAGTATAAATTCAGTCTGAGATGGACCAAGA
>XR_005052566.1
GGTTTGGACTTGGGCTCGTTCGACATTGCAGCCGACAGTGCAGGTGGCTGCTACCTGACTAatttacaaatcaccttgcatcataaataactacttgTTATTATTTAtaaatcagtcagccagtcaccgtTTACCCACAACGCAGCATGGATTTGATGCTCTCGATCACGGCCAGTGGTTTAATATATGACATAATGGCTTCGCTGCTACGTGTGGGGGATGTCATCTATAACAATGTGGCTGTTCGAAATTCTGTGTCGCTCAAAGCTTTGAGTaattaaccttttttttttacacaattgGCTGGAAAGAGCCAATGCTCCAGGAAGCTTTGTTTCCCCATCACTGCTTTTCAGCATGTTTTCAGTGAATTAGACTACAGGAGTTTTGTAACTTTTTCCACCTTGGCTTACTGTTAGTTGGATTCTAACTGGTCTCCGGTAGTTGGTCTCGCTGACCATAACCGTGCTGGTTGGCTACACTGGTTAGGCTAATAGCTAGTTGGCTAAATAGCtgatgttagctggctggctaagatAACTGCATATAGCTAACATTCTTTGATTGTTGGTTAGATGGTGTTATGTATTTCCAAAACATTGGTTTACTTTAATCACTCAAGTCATGAGCGCAAATTATTGGTTTAGTATGAAGTTCTACATTTTAAGTTATTTCTGTTGTAGTTTACATCACAGGGAATAGGCTGGTCCTCCATATTACTTCACACCTGACTTTATCATTCTTCTGAATTCTGATTGGTTTTATGTAACAACTCCAAAAATAGAACTGTGAGGTGTAACTTTGCAATGGGACTTAaaacatttatatattttatttgctCTTTTAAACTTAACCATTTTATTTATCTCCGTAGCCCACTCACTTTACATTtttagataataaagcatttgacctttccaCTGTGTTAACaatggaggattggttgattttcAGTTTAAGTATTTAAGATGATTGACGAGAAAAGTATCGTCCAACCATCGGGTAACTTGCTTCATGGACATCAAAGGTGAGGGTGAAATTCAGATGTTCACTGCTTGTATTGATGAAGGAGTGGAATCGATGAAgttcctctgctgtcctctggaaTAGAAGGAACACGTCATCAAAGGAAGCCATTTACAGAGCCTGATGAGccttcctctcctctgaggacccagtgagggtggagctcagtcagagagctgttgaGGGACTGGTTAGGAAGAACACTTCTACAGCCAGAGAGgggcagTCAAGAAATGGAACAGCAAGGCCACAG

Function

NR:

description
telomere length regulation protein TEL2 homolog isoform X5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052567.1 False 1669 mRNA 0.40 3 29413870 29416451
XR_005052566.1 True 1279 mRNA 0.41 4 29413870 29442670

Neighbor

gene id symbol gene type direction distance location
LOC118965283 NA coding upstream 17686 29389617 ~ 29396184 (+)
LOC110527621 NA coding upstream 314459 29087111 ~ 29099411 (+)
LOC110527620 NA coding upstream 379264 29026331 ~ 29035347 (+)
LOC110527630 NA coding upstream 400619 29010978 ~ 29013251 (+)
LOC118965280 NA coding upstream 421633 28987346 ~ 28992237 (+)
LOC110527623 NA coding downstream 121139 29563350 ~ 29636769 (+)
LOC110527616 NA coding downstream 243746 29686416 ~ 29703056 (+)
LOC118965277 NA coding downstream 352027 29794697 ~ 29804454 (+)
trnak-uuu-3 NA coding downstream 448209 29890879 ~ 29890951 (+)
LOC110528937 NA coding downstream 489155 29931825 ~ 29944679 (+)
G593370 NA non-coding upstream 104917 29301795 ~ 29308953 (+)
G593367 NA non-coding upstream 115198 29297976 ~ 29298672 (+)
G593366 NA non-coding upstream 116443 29297128 ~ 29297427 (+)
G593365 NA non-coding upstream 117516 29296117 ~ 29296354 (+)
G593358 NA non-coding upstream 128228 29285437 ~ 29285642 (+)
G593493 NA non-coding downstream 45125 29487795 ~ 29539669 (+)
G593513 LOC106610831 non-coding downstream 85357 29528027 ~ 29528910 (+)
G593597 NA non-coding downstream 272043 29714713 ~ 29715027 (+)
G593628 NA non-coding downstream 338457 29781127 ~ 29822082 (+)
LOC110527619 LOC106578599 other upstream 50519 29329584 ~ 29503787 (+)
G593283 NA other upstream 349278 29059698 ~ 29064592 (+)
G593171 NA other upstream 521445 28892163 ~ 28892425 (+)
G593144 NA other upstream 572787 28835209 ~ 28841083 (+)
plekha3 LOC106575131 other upstream 1539449 27854006 ~ 27874521 (+)
G593774 LOC106593940 other downstream 589289 30031959 ~ 30032621 (+)
G596168 NA other downstream 1460509 30903179 ~ 30903887 (+)
G596297 NA other downstream 1639051 31081721 ~ 31082290 (+)
LOC110531742 LOC106594194 other downstream 2566644 32007023 ~ 32013203 (+)

Expression


Co-expression Network