trnaw-cca-2


Basic Information

Item Value
gene id trnaw-cca-2
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 29890649 ~ 29890720 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaw-cca-2
GGCCTCGTGGCGCAAAGGTAGCGCATCTGACTCCATATCAGAAGGTTCTGTGTTCAAATCACATCGTGGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaw-cca-2 True 72 mRNA 0.57 1 29890649 29890720

Neighbor

gene id symbol gene type direction distance location
LOC110527637 NA coding downstream 52040 29833722 ~ 29838609 (-)
LOC118965276 LOC106578600 coding downstream 157094 29728776 ~ 29733555 (-)
LOC110527615 LOC106610831 coding downstream 350955 29525727 ~ 29539694 (-)
LOC110527636 LOC106586052 coding downstream 395369 29454045 ~ 29495280 (-)
LOC118965278 NA coding downstream 468995 29416507 ~ 29421654 (-)
LOC118965350 LOC106593417 coding upstream 135983 30026703 ~ 30028202 (-)
LOC110527614 NA coding upstream 223914 30114634 ~ 30119849 (-)
LOC110527624 LOC106595982 coding upstream 231255 30121975 ~ 30126819 (-)
LOC110527641 LOC106582623 coding upstream 422659 30311282 ~ 30394791 (-)
LOC110527645 NA coding upstream 694783 30585503 ~ 30593851 (-)
G594977 NA non-coding downstream 46483 29743409 ~ 29844166 (-)
G595001 NA non-coding downstream 70825 29802575 ~ 29819824 (-)
G595000 NA non-coding downstream 86255 29794738 ~ 29804394 (-)
G594952 NA non-coding downstream 189383 29700058 ~ 29701266 (-)
G594934 NA non-coding downstream 216700 29669112 ~ 29673949 (-)
G595083 NA non-coding upstream 38820 29929540 ~ 29930735 (-)
G595045 NA non-coding upstream 40992 29931712 ~ 29932289 (-)
G595033 NA non-coding upstream 51123 29941843 ~ 29944311 (-)
G595119 NA non-coding upstream 90285 29981005 ~ 29981778 (-)
G595216 NA non-coding upstream 266714 30157434 ~ 30165205 (-)
G595022 NA other downstream 61084 29827953 ~ 29829565 (-)
G594968 LOC106591690 other downstream 163159 29721676 ~ 29727490 (-)
G594905 NA other downstream 264750 29589993 ~ 29625899 (-)
G594906 NA other downstream 277913 29599631 ~ 29612736 (-)
G594900 NA other downstream 297187 29568201 ~ 29593462 (-)
G595364 NA other upstream 419451 30310171 ~ 30310934 (-)
LOC110527646 asip other upstream 713455 30604097 ~ 30611268 (-)
G596094 NA other upstream 953461 30844181 ~ 30844624 (-)
G596039 NA other upstream 972137 30862857 ~ 30863320 (-)
G596352 NA other upstream 1045445 30936165 ~ 30936614 (-)

Expression


Co-expression Network