LOC110527618


Basic Information

Item Value
gene id LOC110527618
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 29974966 ~ 29983540 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609016.2
CGGGACGCTccttcaacaacaacagctagtcAGACACCTCGGTAGGGTTCTAGCAAACATAGCTACAACATTCACGTTCTTTACACTGTTTTGGTGAATATTAGTCGCTGTGTATTAAACACTTCTGTTGTATGTACTTGTTGGCCCATTTAATTATATATTTACGTTGTTTTGTCAGCTAGCTGGTTTGCTAAGTTAGCTTAGAACTaagctagtcgctaatgctagctagctaacatccccgaccatgagttcactaagctactctcctcctgATAAAGAAGAGGCGGTCtcctggacggagaaagaagctcttgtcaaagaggaggaggaagaggaggatgttacaaaacaaaaacaagtagagggtgaggctgttactgtaaaagaagaagagaaagacgtttcagtgaaagaagaggaagacgcgttcagagtgaaagaggaggttgttacagtaaaagaagaggaggattcAGTTTTTGGAGTGAAGAAGGAAGGGGAGATGACTGTCACAtcgaaaaaggaggaggaggaggaaactggatatctgagcccggtttcccaaacgcaTATTAAGACATTCAATGGTTCTTACGATGAACGGGccctgattaacactagagagagaggtgactATCGTGGATCTTCTGGGGATCCTCAACAGCAacatgatgctgacgaggcagagaaaagTCTATCCAGATCAGGACtcctcaagaaacaccagcagagacccacagggaagaaaTCTTACTGCAAATCGACATCAGAACTTAAAATACACCAGCGTGTACACACTGGAGAGACATCTCACTGcagctctgactgtgggaaaagaGTCACCTCTTCAGTAGACCTTaaaatacaccagagaacacacacagtagAGAAATCCTatggctgtgatcaatgtgggaagagttttactgaGTCACGCATCCTgaaatcacaccagagaacacacacaggagagaaatcctatggctgtgatcaatgtgggaagagatttactCAACCAGACAGCCTGATAgtgcaccagagaatacacacaggagagaaaccttacagctgttatcaatgtgggaagagttttacgaCATCTAGCCATCTAattgtacaccagagaacacacacaggagagaaaccttatggcTGTGATGAATGTGGGAAGAAATTTACTGCGTCAAACGCCTTGACAGTGCACCAGagagtacacacaggagagaaaccttatagctgtagtcaatgtgggaagagttttacacAACCAGACAGCCTGATAgtgcaccagagaatacacacaggagagaaaccttatatctgttatcaatgtgggaagagttgtACTACATCTAGCCATCTAattgtacaccagagaacacacacaggagagaaagcttttagctgtgatcaatgtgggaagagttttggtacATCTAGCCATCTAATTGTACACCATAGaacccacacaggagagaaaccttatagctgtggtcaatgtgggaagagttttggtcaaTCTGGCCATctgacagtgcaccagagaagacacacaggagagaaaccttatagctgtagtcaatgtgggaagagttttggtcaaTCTGGCCATctgacagtgcaccagagaagacacacaggagagaaaccttatagctgtagtcaatgtgggaagagttttggtacATCTAGCTATctgactatacaccagagaacacatacAGGGGAGAAACTTTATAGCTGTGCTCAATGTGACAAGAAATTCTCTGATAAAAGACAtctgatcaaacatcagaaaatacatacatgaaggaattgtttcatgatatcaattaAATATCCCACCTagcaaaatgtaattgaaaagaaGACTATGCTCGAAGTCCAATATTCGTTCGATGGTAGTTGGAAATATGTATTTTCGGGTTGATTTTTTTCAATGACTTGAAAACAACTTAATTTCAAAGTACTTGCAGTATAATAAATTGGTTTATAATCAATTTGATTAACAATCTtacatcactccagtatttatTGACAACATTCAAGTGCTAATTGTCtttattccactactgaagaagcatgactcaaatcacctcatatttcaaacaTCCAGCCTGacaaaagatacatgttttattattccatGCCTCACCATTAAGTGAATTATTGCCCCTACATATTAACAAAGGGGTGTACATTTGGTTTTGATATTTCATATTTACAATTCATGTAACATTTAGTAATAATTATTTATGCAACCAACTGACAATTTTTGGGTACAATTATATTGACATTGTTATCCTGCTTTCGTAATGTCAGGGTTAATTCTCAGATGTGCCAACCCAAATCTACTAGATGAACATTGGGGACTGGACCCCGATCCAACAACATGCCTATTgagtgaaccctgaaaagagagaTAAGCTACACAGTGAGGTGGAAAGTTACTACGGATATCGCAGGAGTTTCCTCTTGAAATCAGACATGTCTGTGGTAAGGACAACTTGGTTGCTGATTGTCTCAAGGGTTGGCAGTCAAAAATATTTGTGTTGTGCATTTAACCAGTGTGTTACCATGgatcacaatttattttgacACGCTTTTCCGTGTTGGAGATGAGTTTTATTTCttattattttctgtattttttggaaactgcattgttggttaggggctcgtaagtaataGTTCCAGTGTTGTatccggcgcatgtgactaatacaatttgatttgagtttaggctagaagctagtgagttttaggaagacgagagttctagaagctagtgagttttaggattCTATGGAAAGAAAAAGGATAAAAATTATATGattgtatattattatttagaaatgtgttttttcttgtttttaattgttgacagccagttgacACTGTTTATATTGTAGAAGGTGAAGCTTTGTTGATTATAATGAGAAATGGAAGTTGTTTTTTGTTGGTGGTGAGCAAACTTgtccaacaaaaatatatttgttgtcttaaaggggaaggtgttacaggctttggtttttccgTTTATATTTTGATGTTGGACATTAGAGCATAGGAAAGGGGGATACCGAGTCATTCATTTGAATGCAATCAAATGAAATGTGTCTTCGgtgcactgattggtgtcacctcgttagtcagtatgtgttacacctgtcctggcttgtcttgatagatgtggagagtcaacacctttagttgtgCCACCTTTTTGGTTTGCGTCCTGTCTTTAAATTTGGTGTGTGTTTTtctttgtttgcctcttcttgggcagatttagtgAGTCTCGttgtgggtgtcttttaggtcccagttgttgttactagtcaactttcagtggacactgtgagtgtctttcagaaccccttatATTTGGGGGTTGGATATTGCATCCAATTAATATTTTAATCAATTGCATTTCCTCATTAGTCAGTCATCTATTTTTTATCCTCATGTTTGTGTACTAAATATTTATTTTCTCCATTGTGTTGTATcctgtctgaaatgtgctgtataaataaagcttgatttgaacaAATTAA

Function

NR:

description
zinc finger protein OZF-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609016.2 True 3560 mRNA 0.39 2 29974966 29983540

Neighbor

gene id symbol gene type direction distance location
LOC110528937 NA coding upstream 30287 29931825 ~ 29944679 (+)
trnak-uuu-3 NA coding upstream 84015 29890879 ~ 29890951 (+)
LOC118965277 NA coding upstream 170512 29794697 ~ 29804454 (+)
LOC110527616 NA coding upstream 271910 29686416 ~ 29703056 (+)
LOC110527623 NA coding upstream 338197 29563350 ~ 29636769 (+)
LOC110527626 NA coding downstream 26128 30009668 ~ 30016052 (+)
LOC110527639 NA coding downstream 194857 30178397 ~ 30203326 (+)
LOC110527642 cssa12h20orf85 coding downstream 477819 30461359 ~ 30499559 (+)
LOC110527643 chmp4b coding downstream 525721 30509261 ~ 30536127 (+)
LOC110527644 sahhb coding downstream 578046 30561586 ~ 30578870 (+)
G593716 NA non-coding upstream 387 29930878 ~ 29974579 (+)
G593708 NA non-coding upstream 4756 29921422 ~ 29970210 (+)
G593695 NA non-coding upstream 65864 29908837 ~ 29909102 (+)
G593662 NA non-coding upstream 135887 29838440 ~ 29839079 (+)
G593628 NA non-coding upstream 152884 29781127 ~ 29822082 (+)
G593760 NA non-coding downstream 14826 29998366 ~ 30000339 (+)
G593832 NA non-coding downstream 135665 30119205 ~ 30126801 (+)
G593835 NA non-coding downstream 138587 30122127 ~ 30123286 (+)
G593836 NA non-coding downstream 141264 30124804 ~ 30125940 (+)
G595268 NA non-coding downstream 223051 30206591 ~ 30206882 (+)
G593513 LOC106610831 other upstream 446056 29528027 ~ 29528910 (+)
LOC110527619 LOC106578599 other upstream 611615 29329584 ~ 29503787 (+)
G593283 NA other upstream 910374 29059698 ~ 29064592 (+)
G593171 NA other upstream 1082541 28892163 ~ 28892425 (+)
G593144 NA other upstream 1133883 28835209 ~ 28841083 (+)
G593774 LOC106593940 other downstream 48419 30031959 ~ 30032621 (+)
G596168 NA other downstream 919639 30903179 ~ 30903887 (+)
G596297 NA other downstream 1098181 31081721 ~ 31082290 (+)
LOC110531742 LOC106594194 other downstream 2025774 32007023 ~ 32013203 (+)
G599004 NA other downstream 3252273 33235813 ~ 33236636 (+)

Expression


Co-expression Network