LOC110527614


Basic Information

Item Value
gene id LOC110527614
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 30114634 ~ 30119849 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036983138.1
ttcAACAACTGCAGCCACCTCGGTGGCCAACAAAGTCGGAACATTCAAGTTCTTTAGACAATTTCGTGGTTTATTTGCCACTGTGATTTAAACATACTTATGTGTAAGCAACTAGCTACCCCATTTAGTTTAATATTTACGTTGTAAGTCAGCTAGCTGGCTGGTTAAATTAGCACTAGTCTAGTCTCTAATGCTAACAAGCGGTTATTcccgaccatgagttcactaaactactctcctcctgataaagaagaggtctgctggacggagaaagaagttcttgtgaaagaggagaaggaagagaaggatgttacaatacaaaaacaagtagagggtgaggctgttaccgtgaaagaagaagaggaagacgcgttTTTTGGAATGAAGGATGAAGAgggggagattactgtcacaCTAGAGGAGGACGAAGAAGAGAAGACTGGAGAACTGATTAACACCAGAAAATACAgagagagacgggacaatcgtggatcctctggggagcctcaacaacatcatgatgctgacgaggcagagaaaagtctctccagatcagaactccTCAagaaacacacaggagagaaatctttctgctgctctgactgtgggaaaatATTCAACTCTTCAGTAGACCTTAAGATACATCAAAtaattcacactggagagaaactcTCTAggtgtgatcaatgtgggaagagtttcggTACATCTGGCTGTCTGACAAAacaccagagaaaacacacaggagagaagtcttatagctgtgatcaatgtgggaagagttttacgacatctagctatctaactatacaccagagaacacacacaggagagaaattgTATAGCTGTagtcagtgtgggaagagttttactcattcaaccagcctgatatcacaccagagaacacacacaggagagaaatcgtatagctgtgatcaatgtggaaagagtttcggTACATCTGGCTGTCTGACaaaacaccagagaacacacacaggagagaaaccttatagctgtggtcaatgtgggaagagttttggtacATCTGGCTCTCTGGCAacacatcagagaacacacacaggagagaaaccttatagctgtactcaatgtgggaagagttttactcattcaaccagcctgatatcacacctgagaacacacacaggagagaaaccttattgctgtggtcaatgtgggaagagtttcactcAGTCAACCAGTCTGACATCAcaccagaggacacacacaggagagaaaccttgtagctgtgatgaatgtgggaagagttttactcagctaagcagcctgatatcacaccagagaacacacacaggagagaaaccttatagctgtaatcaatgtgggaagagttttgcttcATCTGGCATTTTGACtgtacaccagagaatacacacaggcgAGAAACCTTAttgctgtgatcaatgtgggaggagttttactCAGCTAAGCAGCCTGGTAtctcaccagagaacacacacaggagagaaacctcacagctgtaatcaatgtgggaagagatactctgataaaagatctctgactaaacatcagaaaatacatgtagttgtttcatgatatcaatgaaataATGTAGAATGTTTTTAATGTTGTGGAAGTATTTTAGTCACGTCACAATaaagaatgttttaacattg

Function

NR:

description
zinc finger protein 271-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036983138.1 True 1676 mRNA 0.42 2 30114634 30119849

Neighbor

gene id symbol gene type direction distance location
LOC118965350 LOC106593417 coding downstream 86432 30026703 ~ 30028202 (-)
trnaw-cca-2 NA coding downstream 223914 29890649 ~ 29890720 (-)
LOC110527637 NA coding downstream 276025 29833722 ~ 29838609 (-)
LOC118965276 LOC106578600 coding downstream 381079 29728776 ~ 29733555 (-)
LOC110527615 LOC106610831 coding downstream 574940 29525727 ~ 29539694 (-)
LOC110527624 LOC106595982 coding upstream 2126 30121975 ~ 30126819 (-)
LOC110527641 LOC106582623 coding upstream 193530 30311282 ~ 30394791 (-)
LOC110527645 NA coding upstream 465654 30585503 ~ 30593851 (-)
LOC110527646 asip coding upstream 484248 30604097 ~ 30611268 (-)
LOC110528941 LOC103372673 coding upstream 529140 30648989 ~ 30686105 (-)
G595119 NA non-coding downstream 132856 29981005 ~ 29981778 (-)
G595033 NA non-coding downstream 170323 29941843 ~ 29944311 (-)
G595045 NA non-coding downstream 182345 29931712 ~ 29932289 (-)
G595083 NA non-coding downstream 183899 29929540 ~ 29930735 (-)
G595001 NA non-coding downstream 294810 29802575 ~ 29819824 (-)
G595216 NA non-coding upstream 37585 30157434 ~ 30165205 (-)
G595244 NA non-coding upstream 47091 30166940 ~ 30167233 (-)
G595282 NA non-coding upstream 97713 30217562 ~ 30217834 (-)
G595298 NA non-coding upstream 107774 30227623 ~ 30227862 (-)
G595303 NA non-coding upstream 110208 30230057 ~ 30230257 (-)
G595022 NA other downstream 285069 29827953 ~ 29829565 (-)
G594968 LOC106591690 other downstream 387144 29721676 ~ 29727490 (-)
G594905 NA other downstream 488735 29589993 ~ 29625899 (-)
G594906 NA other downstream 501898 29599631 ~ 29612736 (-)
G594900 NA other downstream 521172 29568201 ~ 29593462 (-)
G595364 NA other upstream 190322 30310171 ~ 30310934 (-)
G596094 NA other upstream 724332 30844181 ~ 30844624 (-)
G596039 NA other upstream 743008 30862857 ~ 30863320 (-)
G596352 NA other upstream 816316 30936165 ~ 30936614 (-)

Expression


Co-expression Network