LOC110527624 (LOC106595982)


Basic Information

Item Value
gene id LOC110527624
gene name LOC106595982
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 30121975 ~ 30126819 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609026.2
TCAGATACAGCTCGtcaaccacctcggtagcttgctagccaacagCCGATAGATTCAAGCTATTTAGACGCTTTCGGTCTATATTTGCTGCTGTGTTTTAGACACACTTCTGTCGTATCTACTTGTTTACCTATTTAATTTAATATTACGTTATTTTGTATTAGTCAGATATAGCAGCTGGCTGGTTAAATTAGCACTAGCCTAGTCGCTaacgatagctagctagctaacattttcgAACATGAGCTCCCTAAACTACTCCCCTCCTGTTAAAGaagaggtctgctggacggagaaagaagctctggggctgaacattgtcgtgaaagaggagacggaagaggaggatgtcacagtaaaacaagaagttgggggtgaggctgttacagtgaaagaagagaaagacgtttcagtgaaagaaaaGAAAGACTCGTTCAGAgtgaacgaggaggaggaggatgtcacagtaaaagaagaggaagggaaagaggatgTAGTTTTTGTAGTGAAGATGGAAggggagattactgtcacattggaagatggagatgaggaggatgttacagtaaaagaagaggatGTCGTTTTTGGAGTGAAGAAGGAAggggagattactgtcacattgAAAGATGAGATGGAGatagatctgattaacaccagagagaaACCAGACTCTGACAGCGGGGAGAGTCCTTCAGGGGAACCAGACCCAGAGACGCCCAAACCAGCGAGACaacaccactgctcccactgtgtTAAGAGTTTTTGCTGGTCAGGGAACCTAAAACTGCAcgaaagaacacacacaggagaaaagcctttccaatgttcccagtgtggaaaaagTTTTACCATGTTAGCTAACCTGAaaaggcatgagagaatacacacaggagaaaagccttatcaCTGTTCCCACTGTGGAATGAGTTTTACTCAGACAGGGCACCTAAAAGCTCATgagaggatacacacaggagaaaagcctttccaatgttcccagtgtggaaaaagTTTTACTAAGAAAGGGCAATTAAAagagcatgagagaatacacaaaGGAGAAAAGCCATTCCAATGttcccattgtggaaagagttttactctAATAGGAAACCTAAAAAAGCATGCGAGACTACACACCGGAGAAAtgcctttccaatgttcccagtgtgaaAAGAGTTTTGCCGTGTTAGCTAACCTGAaaaggcatgagagaatacacacaggagaaaagccttaccactgttccCACTGTGAAAAGAGGTTTATTCAGTTAGGGGACCTAAAAGCTCATgagaggatacacacaggagaaaagccttatcaCTGTTCCCACTGTGAAAAGAGTTTTATTCATTTAGGGTACCTAAAAGctcatgagaggacacacacaggagaaaagcctttccaatgttcccatTGTGAAAAGACTTTTACCATTTTAGCTAACCTGAaaaggcatgagagaatacacactggagaaaagcctTATCACTGTTCCCACTGTGGAATGAGTTTTACTCAGACAGGGCACCTAAAAGCTCATgagaggatacacacaggagaaaagccattCCATTGTTCCCAGTGTAGAAAGAGTTTTACTAAGAAAGGGCTGTTAAAAgagcacgagagaatacacaaaGGAGAATAGCCTTTCCAATGcccccagtgtggaaagagttttccCTGGTTAAGGAGCCGGAAGGAGCATAAGAAGACACACACCAAAAAAGCCCtaccactgctctctctctgtgtggaagGACATTTTCCCAGTCACAGaacctgaaatcacatgagaCAATAAAGGTGCTGTGttctgacttttttttttttgactgagaatttgtgtttttgtttatgCCACATGAAATCATATTTACGAttatacctgtctatataaggtcctacagttgacaatgcacgtcagagcaaacgccaagcaatgaggtcaaataaattgtccg

Function

NR:

description
zinc finger protein 501-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609026.2 True 1973 mRNA 0.43 2 30121975 30126819

Neighbor

gene id symbol gene type direction distance location
LOC110527614 NA coding downstream 2126 30114634 ~ 30119849 (-)
LOC118965350 LOC106593417 coding downstream 93773 30026703 ~ 30028202 (-)
trnaw-cca-2 NA coding downstream 231255 29890649 ~ 29890720 (-)
LOC110527637 NA coding downstream 283366 29833722 ~ 29838609 (-)
LOC118965276 LOC106578600 coding downstream 388420 29728776 ~ 29733555 (-)
LOC110527641 LOC106582623 coding upstream 186560 30311282 ~ 30394791 (-)
LOC110527645 NA coding upstream 458684 30585503 ~ 30593851 (-)
LOC110527646 asip coding upstream 477278 30604097 ~ 30611268 (-)
LOC110528941 LOC103372673 coding upstream 522170 30648989 ~ 30686105 (-)
LOC118965351 NA coding upstream 771108 30897927 ~ 30912147 (-)
G595119 NA non-coding downstream 140197 29981005 ~ 29981778 (-)
G595033 NA non-coding downstream 177664 29941843 ~ 29944311 (-)
G595045 NA non-coding downstream 189686 29931712 ~ 29932289 (-)
G595083 NA non-coding downstream 191240 29929540 ~ 29930735 (-)
G595001 NA non-coding downstream 302151 29802575 ~ 29819824 (-)
G595216 NA non-coding upstream 30615 30157434 ~ 30165205 (-)
G595244 NA non-coding upstream 40121 30166940 ~ 30167233 (-)
G595282 NA non-coding upstream 90743 30217562 ~ 30217834 (-)
G595298 NA non-coding upstream 100804 30227623 ~ 30227862 (-)
G595303 NA non-coding upstream 103238 30230057 ~ 30230257 (-)
G595022 NA other downstream 292410 29827953 ~ 29829565 (-)
G594968 LOC106591690 other downstream 394485 29721676 ~ 29727490 (-)
G594905 NA other downstream 496076 29589993 ~ 29625899 (-)
G594906 NA other downstream 509239 29599631 ~ 29612736 (-)
G594900 NA other downstream 528513 29568201 ~ 29593462 (-)
G595364 NA other upstream 183352 30310171 ~ 30310934 (-)
G596094 NA other upstream 717362 30844181 ~ 30844624 (-)
G596039 NA other upstream 736038 30862857 ~ 30863320 (-)
G596352 NA other upstream 809346 30936165 ~ 30936614 (-)

Expression


Co-expression Network