LOC110527644 (sahhb)


Basic Information

Item Value
gene id LOC110527644
gene name sahhb
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 30561586 ~ 30578870 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609053.2
GAGCAACACACCCATCTTGAGATTCGGGTTCTTATTGGCTGCCACTCCCGGTGGCTGTGAGAGCCTATGGGTTTCCTCTCATACGGGGCAGGAACATTCTCAGCCAATTGGAACCGCAAGGTGGAAGATTGGCATGGGACCTCATGAATATTACAAGAGGGCAAATGACGGCTACTTAAATTCAAGTTCACACCTATCGTTCCCTTCTTTTCTGTCCAAAGCCAGGCAGTAACAACCATACAGCGATCACGACTGAACGATCCAAAAGAAGACAATCATGTCCGAGAAACTGCCCTTCAAAGTTGCTGACATCAGCCTGGCGGAGTGGGGCCGCAAAGCTATTGATATTGCAGAGAATGAGATGCCCGGCCTGATGAAGATGAGGGAGCTGTATGGCCAGTCCAAGCCCCTGAAGGGCGCCCGCATTGCAGGCTGCCTCCACATGACCCTGCAGACCGCCGTGCTGATTGAGACCCTCACTGCCCTCGGAGCCGAGGTTCAATGGTCCAGCTGCAATATCTTCTCCACTCAGGACCACGCCGCTTCAGCCATTGCCAAAACTGGGGTTCCAGTGTATGCCTGGAAGGGCATGACCGATGAGGAGTATGTGTGGTGCATTGAGCAGACCATCTACTGGAAGGATGGCCAGCCCCTCAACATGATCCTGGACGATGGCGGTGACCTCACCAACATGGTCCACAAGAAGTACCCCAAGCTGCTGTCAGGAATCAAGGGGGTGTCTGAGGAGACCACCACCGGGGTGCACAACCTGTACAAGATGTTGAAGAGTGGCGACCTCAAGATCCCAGCCATCAACGTCAACGACTCAGTCACCAAGAGCAAGTTTGACAACCTGTACGGCTGCAGAGAGTCTCTGATTGATGGGATCAAACGGGCCACAGACGTGATGATCGCCGGGAAGGTGGCAGTTGTTGCCGGTTACGGTGATGTTGGCAAGGGGTGTGTTCAGGCCCTCCGTGGGTTTGGTGCCCGTGTCATCGTCACAGAGGTTGACCCCATCAATGCCCTGCAGGCTGCCATGGAAGGATACGAAGTCACCACCATGGAGGAGGCTTGCAAGGAGGGAAACATCTTTGTGACCACCACTGGCTGTGAGGACATTCTTTTGGGCAAACACTTTGAGCACATGAAAGACGACTCCATCGTTTGCAACATCGGCCACTTCGACTGTGAGATAGACATGAACTGGCTCAATGCCAACGCAGCCGAGAAGATAAACATCAAGCCACAGGTGGACCGTTACCGCATGAAGAATGGCCGCCACATCATTGTGCTGGCTGAGGGCAGATTGGTTAATCTGGGCTGTGCCATGGGTCACCCCAGCTTTGTCATGAGCAACTCCTTCACCAACCAGGTGTTGGCCCAGATTGAGCTGTGGAAGAACACCAGCAAGTACCCCCTGGGAGTTTACTTCCTGCCCAAGAAGCTGGATGAGGAGGTGGCTGCTGCCCATCTTGACAAGCTCGGCGTCAAGCTGACCAAGCTTTCAGATAAGCAGGCCAAATACCTGGGACTGCCCCGCGAAGGACCCTTCAAGCCTGACCATTACCGCTATTGAGAAATGTCAGGAAGGTGGCCAAGCAGCGGCCCAGACTCATGGTGGGGGTCTGATGGTGGTATGGTGGCGCATGGACTCGTGGGTTTGGGTAGGCCAAGATTCCCACAAGTCTTTTGGAGGTTAGGACATTTTGCTTCAACTACCCTTTAAACTGTCTTGCCCATTCTACATACCTTTTAGATTCCAACCAGAGCTCCTTCGCCTTTACAGCAACAAGTGCTAAGTGGCTTCTAAAGGCACTATTCTTGTTATAAATTGCATTCCCTCTTTGATCATGGAAAAAACGTGATGCTTTTAGTTAAATCCCCATACTATTCAAGTTTACATATACACCATAGCTAATATGGCAATAAGTGCTGGTTTCATATCATTGTCTTATGGAGAAACTCTGACGTACCACCAAAGCCTGGCTTAAAGAACACACTCAGTTTCCCCATTTGCTTATTTTGTAAGTCTAGGATTCTGTCTGAAGGGACAGGAAACATCCAAGTGCTTTCCTGTTCTGTTTTCTTAGCTGAGCTGTGACGGAATGGGCTGTGGTCTGGTCGAACATATACTGCCATGTTTAACGGTTACATTGTTAATCCCAAGTGTTGCATTTCCTACAGTACTTGCACTGTTGTGAAATGTGATGCAATAAAGATACAATTTTA

Function

NR:

description
adenosylhomocysteinase

GO:

id name namespace
GO:0006730 one-carbon metabolic process biological_process
GO:0033353 S-adenosylmethionine cycle biological_process
GO:0004013 adenosylhomocysteinase activity molecular_function

KEGG:

id description
K01251 E3.3.1.1, ahcY; adenosylhomocysteinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609053.2 True 2232 mRNA 0.51 10 30561586 30578870

Neighbor

gene id symbol gene type direction distance location
LOC110527643 chmp4b coding upstream 25459 30509261 ~ 30536127 (+)
LOC110527642 cssa12h20orf85 coding upstream 62027 30461359 ~ 30499559 (+)
LOC110527639 NA coding upstream 358260 30178397 ~ 30203326 (+)
LOC110527626 NA coding upstream 545534 30009668 ~ 30016052 (+)
LOC110527618 NA coding upstream 578046 29974966 ~ 29983540 (+)
if2b LOC106582627 coding downstream 44614 30623484 ~ 30636008 (+)
LOC110527647 LOC106582629 coding downstream 154713 30733583 ~ 30854816 (+)
LOC118965377 NA coding downstream 473756 31052626 ~ 31071618 (+)
LOC118965378 NA coding downstream 492872 31071742 ~ 31073140 (+)
LOC118965379 NA coding downstream 494475 31073345 ~ 31074263 (+)
G595603 NA non-coding upstream 4066 30557287 ~ 30557520 (+)
G595599 NA non-coding upstream 9773 30551607 ~ 30551813 (+)
G595593 NA non-coding upstream 15142 30546007 ~ 30546444 (+)
G595588 NA non-coding upstream 21910 30539469 ~ 30539676 (+)
G595586 NA non-coding upstream 29256 30530480 ~ 30532330 (+)
G595612 NA non-coding downstream 4132 30583002 ~ 30583380 (+)
G595775 NA non-coding downstream 264682 30843552 ~ 30844716 (+)
G595715 NA non-coding downstream 265980 30844850 ~ 30858694 (+)
G596127 NA non-coding downstream 297050 30875920 ~ 30876207 (+)
G596131 NA non-coding downstream 299420 30878290 ~ 30878683 (+)
G593774 LOC106593940 other upstream 528965 30031959 ~ 30032621 (+)
G593513 LOC106610831 other upstream 1032676 29528027 ~ 29528910 (+)
LOC110527619 LOC106578599 other upstream 1198235 29329584 ~ 29503787 (+)
G593283 NA other upstream 1496994 29059698 ~ 29064592 (+)
G593171 NA other upstream 1669161 28892163 ~ 28892425 (+)
G596168 NA other downstream 324309 30903179 ~ 30903887 (+)
G596297 NA other downstream 502851 31081721 ~ 31082290 (+)
LOC110531742 LOC106594194 other downstream 1430444 32007023 ~ 32013203 (+)
G599004 NA other downstream 2656943 33235813 ~ 33236636 (+)
G599123 NA other downstream 2711656 33290526 ~ 33295528 (+)

Expression


Co-expression Network