LOC118965378


Basic Information

Item Value
gene id LOC118965378
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 31071742 ~ 31073140 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052704.1
ttagcgggcattgcgcccggcccgccacaggagtcgctggtgcgcaatgagacaaggacatccctaccgaccaagccctccctaacccggacgacgctaagtTCCCTAACTCTAAATCAATATATTGCTTTAACTGATTCTGTTGTCCTGATCACATCCTTGGGCAGCACAATCATCACTTCTTGCTGATTTATGTATCCTCTGTATGTATtattgttactgtaatttaattatgccaatgtgctttcattaattgaaaacccttaatctattttatgagaatttgtaagattcttgatcgcataaaatagacggagaccagtctttcaataataggtaacagaatcTATTCTCGGAGCGTGCTCCCACtttaccacgagcaacagtttatatacaaatcATGACGTAATTTCATTGTtttaacagaatcccctcctctcgaccgggacaaagtgaggtgaaaagttcattctaacttactaacacactcccagCCTTGAACGTACAGGTCCCTCCACCATTGCCTCCTGCCTCCCGTCCGGCTGATGACCCATCCCGTGCCCCCCAGGACCCACCCCTTGCCGTCCTGGACCAGGCCCACCTGAATTCATCCCAGGCTCCTGTCCTTGGGgcaaagagaagaagaggaggatgtgccCCGGCTGTCCTTCCTGCCTCCAAGGCCTGCCCAAGAAAGTGCTGagCTGCTGCTTCCAGAGAGCTGGCGGGAAACTCTCAACAAGGAGCAGCAGCGATGGATTGGCAGGAAGCTGTTTACCAGGAGCAGGTCCCAATTTCATCACAGACTTGCGTCCATGGTGGTACCCTCCCCAACCCCGGCCGGTCTACAATCAGCCATCCGCATCACCCGACCCCTTCTTTGCATGTACGCTGTTCCTCTGGATGCCCGTTTGTATGTGGGC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106593263

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052704.1 True 923 mRNA 0.50 3 31071742 31073140

Neighbor

gene id symbol gene type direction distance location
LOC118965377 NA coding upstream 124 31052626 ~ 31071618 (+)
LOC110527647 LOC106582629 coding upstream 216926 30733583 ~ 30854816 (+)
if2b LOC106582627 coding upstream 435734 30623484 ~ 30636008 (+)
LOC110527644 sahhb coding upstream 492872 30561586 ~ 30578870 (+)
LOC110527643 chmp4b coding upstream 535615 30509261 ~ 30536127 (+)
LOC118965379 NA coding downstream 205 31073345 ~ 31074263 (+)
LOC110527653 LOC106582631 coding downstream 131364 31204504 ~ 31716227 (+)
LOC110531742 LOC106594194 coding downstream 933883 32007023 ~ 32013203 (+)
LOC110528942 NA coding downstream 1123826 32196966 ~ 32257394 (+)
LOC110527657 rbm39 coding downstream 1272508 32345648 ~ 32407998 (+)
G596265 NA non-coding upstream 46699 31024621 ~ 31025043 (+)
G596197 NA non-coding upstream 79475 30989872 ~ 30992267 (+)
G596207 NA non-coding upstream 135293 30936185 ~ 30936449 (+)
G596184 NA non-coding upstream 156292 30915249 ~ 30915450 (+)
G596165 NA non-coding upstream 169494 30902003 ~ 30902248 (+)
G596327 NA non-coding downstream 54181 31127321 ~ 31132421 (+)
G596472 NA non-coding downstream 67133 31140273 ~ 31140492 (+)
G596804 NA non-coding downstream 504384 31577524 ~ 31577843 (+)
G596805 NA non-coding downstream 504806 31577946 ~ 31578145 (+)
G596883 NA non-coding downstream 619776 31692916 ~ 31693284 (+)
G596168 NA other upstream 167855 30903179 ~ 30903887 (+)
G593774 LOC106593940 other upstream 1039121 30031959 ~ 30032621 (+)
G593513 LOC106610831 other upstream 1542832 29528027 ~ 29528910 (+)
LOC110527619 LOC106578599 other upstream 1708391 29329584 ~ 29503787 (+)
G593283 NA other upstream 2007150 29059698 ~ 29064592 (+)
G596297 NA other downstream 8581 31081721 ~ 31082290 (+)
G599004 NA other downstream 2162673 33235813 ~ 33236636 (+)
G599123 NA other downstream 2217386 33290526 ~ 33295528 (+)
G600013 NA other downstream 2893149 33966289 ~ 33966755 (+)

Expression


Co-expression Network