LOC110528942


Basic Information

Item Value
gene id LOC110528942
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 32196966 ~ 32257394 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036983154.1
AAAGAACAAGATATCAGTACAGCTGAATGTATGATCGCTTGCTTTGAGTCACCCTGGGATAGGAGTGTGTTTTCTATCAGtgtgtttcagtgtacCTGGTGTGTGCTATGGAGAGTCCTAAGAGGAGAATGGCCTTTAAGAAGCTGAAAGGGAGGTGCATCGCTGAGCTGCTGCCCTTGGGCTGTACCCTCCATCGCTTAGCCAGCCCCCAGACGGAAGCCAACCACAAGGTGTCTCAGGCTGCCAGCAACTGTCTCAGGACCAAGGTGGCCTTCAGGACCAAGGCTGTAGTCTACTACACGGAAATCCTGAGGAACAGCGATGTCCAGCTCCAGCAGATTGCCTGTCTGGCCCTCAAGTGTCTCAAAGCGATGGAGAGCGTGGAGCAGGAGGCTGAGTTGTGGTGGTcatctgatgaggacctgcgcaGTGCTGTTAGAGAGACCGTGCTATCATATGgtTCAGGAACTTCAGTGGATGCTCGTGCCTGCACGCCATCACAAACACACCAGTTATGTCCAGTTTCTGGGTTTTGTGTTTGGATCACAGCACATCCCGGCTTGAAATCCCCAGCACCCCTGTAAAATTAAGTGAATAAGCATGTGTGAAAAAAGTCATCCATATTCACTAAGCAATATTTTTATGGACAGAATAGTCCAATGCTAAAATAACACCATCAAGGATAAATGTCTTCTCCTGAATTCAATAAAACCTTTTAACTTCTCCAACATTAGCCCAGCTGTTgattatacacacaaacacacaagtgaCACAGACGAGGGCTAGTGAAATTAACTGATTGTGAGATAcatcacattttttaaaatc

Function

NR:

description
protein FAM65C-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036983154.1 True 828 mRNA 0.47 5 32196966 32257394

Neighbor

gene id symbol gene type direction distance location
LOC110531742 LOC106594194 coding upstream 183763 32007023 ~ 32013203 (+)
LOC110527653 LOC106582631 coding upstream 480739 31204504 ~ 31716227 (+)
LOC118965379 NA coding upstream 1122703 31073345 ~ 31074263 (+)
LOC118965378 NA coding upstream 1123826 31071742 ~ 31073140 (+)
LOC118965377 NA coding upstream 1125348 31052626 ~ 31071618 (+)
LOC110527657 rbm39 coding downstream 88254 32345648 ~ 32407998 (+)
nfs1 nfs1 coding downstream 210619 32468013 ~ 32480794 (+)
rbm12 rbm12 coding downstream 223542 32480936 ~ 32492404 (+)
LOC110527660 LOC106565032 coding downstream 231473 32488867 ~ 32519712 (+)
fer1l4 LOC106582641 coding downstream 266416 32520230 ~ 32620619 (+)
G597646 NA non-coding upstream 163765 32032947 ~ 32033201 (+)
G597632 NA non-coding upstream 175023 32021735 ~ 32021943 (+)
G597629 NA non-coding upstream 183440 32013318 ~ 32013526 (+)
G597566 NA non-coding upstream 199635 31965209 ~ 31997331 (+)
G597555 NA non-coding upstream 250254 31946476 ~ 31946712 (+)
G597793 NA non-coding downstream 84201 32341595 ~ 32352331 (+)
G597798 NA non-coding downstream 154534 32411928 ~ 32412354 (+)
G597794 NA non-coding downstream 155335 32412729 ~ 32413587 (+)
G597787 NA non-coding downstream 156972 32414366 ~ 32417474 (+)
G597790 NA non-coding downstream 160247 32417641 ~ 32418797 (+)
G596297 NA other upstream 1114676 31081721 ~ 31082290 (+)
G596168 NA other upstream 1293079 30903179 ~ 30903887 (+)
G593774 LOC106593940 other upstream 2164345 30031959 ~ 30032621 (+)
G593513 LOC106610831 other upstream 2668056 29528027 ~ 29528910 (+)
G599004 NA other downstream 978419 33235813 ~ 33236636 (+)
G599123 NA other downstream 1033132 33290526 ~ 33295528 (+)
G600013 NA other downstream 1708895 33966289 ~ 33966755 (+)
G600431 NA other downstream 2501953 34759347 ~ 34759658 (+)
G600531 NA other downstream 2713734 34971128 ~ 34971405 (+)

Expression


Co-expression Network