fam83c (fam83c)


Basic Information

Item Value
gene id fam83c
gene name fam83c
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 32941906 ~ 32950746 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609098.2
TAGGTTTTCAATTCCATATCATGTGAGCGAGAGGTGGAGCCAGATGACGTTAGATACCGCGACCGCTATATGCAGGGGTGTATTTATTAcaccgattctgttgcaaaactttTCGTAAACGGAAGAAAACGGAACGAGGGCGAGACCTACCTGaatgtgtccaatagaaactcttgtttttgtTGCAAAACGGAACTTTTTGGACTAATGGTTACACCCTGGTGGGAAGAGGCGGTGTGCTTCTGAACAGACTATTAGACCAACAATACGATAGCCCCCGCGGGAATAGCCTACAGTCGCTGTCATGATCGGCAACTAGAGAAGTCCAGTCCATTTCAGCGCAGGCCGTTTTCATAAAGAGACTACTAGTTTTTAGAGATTTACATTTGCTATATGCCTGTAAGAGTACTGTAGTGCAGGAGAGTACACCGCCATCTGTTACCTTAGTGCTGCGTAGGCACAATGATGAGCTCCGACGCGCTCCGGCCGACACAGAACTCCGGGCGCAAAGCGCTTGGTAAACTCGCCAGCAGGTTAGAAGAAGTGAAGAACCCATGGCGACAAGGCTCGACGCTCGAACTCAGCCACAACGAGGCGGCCAGGTTGGCAACCGACGCTCTGTTGGAGTCTGGGGAGAAGGAATACAGACGAGTTCTGACAGAGGAAAGGGAATTAAATTTTCTCTCGCCGCTTGAGATTCATTATATTACGGAGAATGCAGCCAAGAACTGTAGCTCCGAAAACAGCTCAAATGGCACCGAGGGGGACATTGGGGAGGGGGATACGGTGTCAGAGCTTACCTCGGGGACCTATTTCCCAATGATGTCCGACGAAGAGCCACCTATTCTGGAACTAGGGTGGCCAGAAAACCCCCAACGATACGGACCCTCAGAAACACAGATCTATTTCCAAAGGGACAAGACTCAGAATGTGAAAGACCTCATTCGGTCGTTAATTAATAAAGCAAAAAGGGTCATAGCGTTGGTCATGGACCTCTTCACAGACGTTGATCTGCTGTGTGACTTGATGGAGGCCTCGAACAAACGCAAGGTCCCTGTGTACATTCTCCTGGATGAGAAGAATCTCAACTACTTTGTTGACATGTGTGCAGCACTGGACATCCAGAACTCTCACCTGGGTAACATGAGAATCCGCAGTGTGTGTGGAGATACATACTGCACTAAAAGTGGGAAAAAATTCACCGGGCAGGTCCAGGAAAAGTTTATGATTATAGACTGTGAGGAAGTCATTGCTGGGTCATACAGTTTCAGCTGGCTCTCAGCGCAGGTCCACAGCAACATGGTGATGCACTTCTCTGGGCAGATCACTGAGAGCTTCGACCGAGAATTCCGCTGCCTGTACGCTGACTCTCAGATCATTGACTGTTTCCATAACCCAGATGAGGAGAGTCTCCCTTACTACCCCTACCCTGTTACTGCGCCCAACATGGGGCTAGACTTCTTCCCCGAGAGGTCACGGGATAGGGAGAGGGTTCTGAGTTCAGAAAACTCCAGCAGCCAATCCAGTTGCAGCATGTCCAGCATCAAGGCAGCACCTGGCATGACCAATACGGTTTACAAGGTCACTCAAGGTCATGACAAGAAAGAGACCAGCAACTCTCACCTGagccctgagaggagaggaggggcactAACTCCCTCCCTTCATAATCAGACTGCCCAAGGCACAAGAGGCTCCCCCAATGGGACCAATCACAGCCCAGTTACAGAGCACGCTTCCTCTGGGATCGGCCAATCGGACGGGATAGAGTGGTCCAAGTCCATCCCCACAGAGTTCCGCCAACCAAACGTTGGCGGAACAACGTCCAAGTTTCAGACTCTTGGTTTATACGACCAAAAGTCAAGCCTCTTCAACAGTAGCCCCAAGACACAGTCTCCAATGCCGGACAGCAAACTCTCTGCCAAGCAGAGGACTACCTCCAACCCCGTCCTCAACAAGCTCACCGACCTCTTCCTCCCCCCAACCAAGAAGGACTTCCTCCCCCCAACTGAGAAGGACACCTACATCTTCAGGAGGTCTCCTCCTCACAGCACAGCCTTTGGGGGGCCAGACCTCTCCCAGACAGAGCCGGAGAGCGAGCAGACTCCCCCGCCACCGCCCCCCATGATAAACCGGAAGGACCAGAAACGCATGACCTTAGGCCACAGCAAACTAGACCTGGTCAACCACTACAACAAGATGAAGTCCAAACAGGTGTACAGCAGGTTTGAGTTAAAGAATAACAACTGAGGCTCTGCTGAGAAAGTACTTTACCTCCCCCACCCCCATCGCACTGGACCTCCAGGAAGCAGAGCACACCTTTTTGCCTTTTGTAGAGAACATTATAGCGGAGTGGCATTTTGTACCTTAATGCCCCGATAGGAGTTTAGAGGAGGGTAGAGTACAGCCTGAATTAGCCTGTTTACACTGAGTTGTAGTGATAGCTTTTTAGCATTTGCATGTAGACATTGAAGCTGTGGCGGTCCTGCCAATAAGTGACATGACACATTTCGCTTAGGGTCCCCAAAATGCTAGGGCCGGCCCTTCATTCAATGACTGTGTATTGTGTTCTTATTTCTGTGTCTTTCACTAGCCAGTATGGCTTTAATGATTTAATACTGTATGAAATGAGTTGTAAATTGAGTTTTACTGGGTTTTTTTAAGATGTGTTTTTACTTTTgatcacacctactcattccagggttgttctttatttttactattttctaatgTACTATTTTTACTAATGTAGAaagtagtacaaataaagaaaaaaccttgaatcagtaggtgtgtccaaacttttgactggtactgtatatctatctatatgTTTAAGTTagtcttttatatatatatatatatttatatatatatatatatatatatatatatatatatatactttaggATGATTTGGTGCGAAAATTATATTAATAGTGAGATGTGCAATGACATTttgtttaaatattttatttatttcattaaaaTAATATACTTGATTGAGAGAATGAATACTGTTTTAGACAGGGTAGCTGTGGTtctgatgtagttgttgagcacAATGTGAACTTTAGTTTTAACCACTGATCATGTGTAAAAAGTAGAATAGcatgtttttgtgttgtgccGGGCATACACTACACGACTTTCCAACATTGCCGAGCCGCACACATTAAACAACCGTCCTTCCTCTAGTTTTTTGTCTTGCCAACGTAATGTTACGCACACTAAACTATGTGGGACAGACGGTGGTAGGGGTTACACACTACAATATTCTTCACTTGCCACGCTGTCTCGTAAAAACGATGTGGTTTAGATTGTTAATGTAACTAGAATGAGCTGTGGTTCAAAGCAGCCTCAACACATTTTCAGTCAGATATTCACGCTTGCCATACAAGTTGAAATATCTAGccaatacattttaaattgattTACATTGTCTGTGAACTTCAGAGCTATAATGATTTGACACTAACTTTGGTTAAAGGTAAGTATAAAcgcatactagtagtagtcatcaCTAACGCGACACGTCTTCATCTCACTGGCATCTTCTCTGGCAAGCTCTCATTGGCTATTGCTGATTACTGTTCTCAAAACTTGTCGTTGCACATCTCACACTACAAGAGCATTGCAGATTTTGTGCGAATAAAATTAAACGTTTGAAAATATCGGGATGGCTCAAAGACTGGATCGGTATCAGTAGTTCTCAGATTTCGGTAGCCCTCAGACGGCCGCGCTCCCCGAGTCGGCAACGACATTGGGATTTTGTCTCCGATCTCAACAACTTGTCTTGGACAGCTAAATCGCACCAAAATCATGTAGTGTACGCCCAGCTTTAAAGGTGCAATatacaaacatctctctgcaATTTCCTGATTgttaaactgaaattaggcaaactaatAGAAttgtatgtgacaaaacaagcaatgcataatgtagagaatcattgtaccatctaaaccactgtgaaatatattttccagaaCCAAATATATTGTATTTTTAGCACTTTGAAGCTGGTGAACGGGAAGCGtagaaatagagcacatagagcagatctaccgcttcttagacttgctttcaatgagagtgacagatctataactcacctttctatgtgaatttggtcgggtcgcccaaaaagttatatATTGTATCTTAAAGAGATGAGTTTGCAAATTAAATATGTGAACTAGAGTTAGAACTGTTACAAGGGCTAAGATTAACTGATTACAGTGTTACTGAAAATAACAATTTGCAATAAAGCTCTTTTTGATTGGG

Function

symbol description
fam83c Orthologous to human FAM83C (family with sequence similarity 83 member C).

NR:

description
protein FAM83C

GO: NA

KEGG:

id description
K23930 FAM83; protein FAM83

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609098.2 True 4290 mRNA 0.44 4 32941906 32950746

Neighbor

gene id symbol gene type direction distance location
LOC110527666 if6 coding downstream 28766 32898346 ~ 32913140 (-)
LOC110527664 LOC106582643 coding downstream 119509 32792180 ~ 32822397 (-)
LOC118965410 NA coding downstream 397894 32543958 ~ 32544012 (-)
si:ch211-15p9.2 LOC106582638 coding downstream 517256 32421664 ~ 32424650 (-)
psmf1 psmf1 coding downstream 618748 32305811 ~ 32323158 (-)
LOC110527668 LOC106582647 coding upstream 9113 32959859 ~ 32998873 (-)
gdf5 gdf5 coding upstream 195682 33146428 ~ 33149825 (-)
oser1 oser1 coding upstream 382250 33332996 ~ 33362244 (-)
LOC118965284 NA coding upstream 389924 33340670 ~ 33342591 (-)
LOC118965409 NA coding upstream 550461 33501207 ~ 33501261 (-)
G598696 NA non-coding downstream 3233 32938370 ~ 32938673 (-)
G598693 NA non-coding downstream 7285 32934354 ~ 32934621 (-)
G598692 NA non-coding downstream 7871 32933503 ~ 32934035 (-)
G598679 NA non-coding downstream 17930 32923618 ~ 32923976 (-)
G598892 NA non-coding upstream 135584 33086330 ~ 33086529 (-)
G598917 NA non-coding upstream 156233 33106979 ~ 33107223 (-)
G599047 NA non-coding upstream 224849 33175595 ~ 33175859 (-)
G599048 NA non-coding upstream 225254 33176000 ~ 33176295 (-)
G599055 NA non-coding upstream 254591 33205337 ~ 33215908 (-)
G598354 NA other downstream 521758 32418190 ~ 32420148 (-)
G596433 NA other downstream 1862588 31078512 ~ 31079318 (-)
G596352 NA other downstream 2005292 30936165 ~ 30936614 (-)
G596039 NA other downstream 2078586 30862857 ~ 30863320 (-)
G596094 NA other downstream 2097282 30844181 ~ 30844624 (-)
G599058 NA other upstream 287301 33237359 ~ 33239795 (-)
G599788 NA other upstream 725333 33674546 ~ 33677297 (-)
LOC110527679 LOC106565035 other upstream 819304 33770050 ~ 33774908 (-)
G600721 NA other upstream 1663746 34614492 ~ 34614875 (-)
G600872 NA other upstream 2014701 34965447 ~ 34966786 (-)

Expression


Co-expression Network