LOC118965409



Basic Information


Item Value
gene id LOC118965409
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 33501207 ~ 33501261 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XR_005052735.1
gaaaatttGCAATTTTAGTATTTGTCTGGTAGGTTTCTTCAAGGAGAAAGCCCCA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XR_005052735.1 True 55 mRNA 0.36 1 33501207 33501261

Neighbor


gene id symbol gene type direction distance location
oser1 oser1 coding downstream 138963 33332996 ~ 33362244 (-)
LOC118965284 NA coding downstream 158616 33340670 ~ 33342591 (-)
gdf5 gdf5 coding downstream 351382 33146428 ~ 33149825 (-)
LOC110527668 LOC106582647 coding downstream 502334 32959859 ~ 32998873 (-)
fam83c fam83c coding downstream 550461 32941906 ~ 32950746 (-)
LOC110527676 stk4 coding upstream 176083 33677344 ~ 33746700 (-)
LOC110527679 LOC106565035 coding upstream 268810 33770050 ~ 33774908 (-)
ywhaba LOC100136192 coding upstream 315962 33817223 ~ 33835858 (-)
abraa LOC106582659 coding upstream 450714 33951832 ~ 33958325 (-)
LOC118965352 NA coding upstream 1598146 35099407 ~ 35200098 (-)
G599643 NA non-coding downstream 84900 33393368 ~ 33416307 (-)
G599635 NA non-coding downstream 117074 33383831 ~ 33384133 (-)
G599634 NA non-coding downstream 117968 33382811 ~ 33383239 (-)
G599614 NA non-coding downstream 138565 33362291 ~ 33362642 (-)
G599583 NA non-coding downstream 205517 33290317 ~ 33295690 (-)
G599795 NA non-coding upstream 106803 33608064 ~ 33608285 (-)
G599839 NA non-coding upstream 162824 33664085 ~ 33664294 (-)
G599841 NA non-coding upstream 163949 33665210 ~ 33665415 (-)
G599842 NA non-coding upstream 165869 33667130 ~ 33667359 (-)
G599788 NA non-coding upstream 173285 33674546 ~ 33677297 (-)
G599058 NA other downstream 261412 33237359 ~ 33239795 (-)
G598354 NA other downstream 1081059 32418190 ~ 32420148 (-)
G596433 NA other downstream 2421889 31078512 ~ 31079318 (-)
G596352 NA other downstream 2564593 30936165 ~ 30936614 (-)
G596039 NA other downstream 2637887 30862857 ~ 30863320 (-)
G600721 NA other upstream 1113231 34614492 ~ 34614875 (-)
G600872 NA other upstream 1464186 34965447 ~ 34966786 (-)
G600881 NA other upstream 1500619 35001880 ~ 35055228 (-)

Expression



Co-expression Network