or134-1 (LOC106582596)


Basic Information

Item Value
gene id or134-1
gene name LOC106582596
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 33595224 ~ 33596343 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021611114.2
CTCATCGGCCGGTCTACTAGGAAATATGAGCTATGCCCTGCAGATATTTGAGAGAGACACGTTCACCACTGCCTTCATAAAGAACCTGATCATGGTGCTGGTGTGGTTCAGCCTCAGCTACATCAACAGCATCGTGGTGGCCACTTTCTTCATGAACCGTGTGTTCTACGGGAACCCACGCTACATCCTCTTCATCCACATGGTCATCAACGATGCCATCCAGCTCACTGTCACCATCACCCTGTTCGTGCTGAGCTACATATTCTACACCATTAACGTGTCCTTCTGCTGCTTCTTCATCCTTGTGGCTGTCTTTACCACCAGGACCTCCCCAGTCAACCTAGCTGGCATGGCCATTGAGCGCTACATCGCCATCTGCAACCCCCTCCGCCACGCTCAGATCTGCACGGCACACCGCACCTACACCCTTATCGGCTTCATCTGGTTCATCTGTGTGGTGCCCGACATCACCGACCTTTTTGTGACCTTGGCCACTGAGTCTTTGAGCTTCTTCCACACACGAGTGTTCTGTCTGAGGCAGAACGTCTTCAAGGACCCCATTCTGACCTACAAGAGGCAAGCCTTCGACATCATCTACTTCTCCTGTGTCTTCTTCACCCTGGTCTACACCTACCTCCGGATCCTGTTCGTTGCCAGGGTTCTGTCCTCAGAGAAGCAGTCTGCCCAGCGGGCCAGGAACACCATCCTGCTGCACGGAGGGCAGCTCCTCATGTGCATGATGTCCTACACCTCCCCCACCGTAGAGACTGTCTTGCGTTTCATCTTACCCGGACACGTCCTGGAGATTCGCTTCGCAAATTACCTTATCGTCTATATCCTCCCCAGGTTCCTCAGCCCCATCATCTATGGTGTCCGGGACAAGGAGTTCTGGAAGTATCTGAAAAGGTATTTTGTTAGTGACCGGTGTAAGGGGATGTTGCATCGAGTCAATCATAGTGAAGAGGGAGAAAATAAAGCAGGTTTAAATAAAAAGTAGGTAGTGATACAATTTACAGTATAtgataaatatttaaaaaatattaaattaaaaGGAATTGCACTGTATTGTAAATATATACTTTGTATGACTTTTTTGTATAGGAATAGAATTAtgattttt

Function

NR:

description
PREDICTED: olfactory receptor 51T1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021611114.2 True 1120 mRNA 0.48 1 33595224 33596343

Neighbor

gene id symbol gene type direction distance location
LOC110527673 LOC106582652 coding upstream 32767 33499420 ~ 33562457 (+)
LOC110528943 NA coding upstream 298148 33291706 ~ 33297076 (+)
sdc4 LOC106582650 coding upstream 379312 33205314 ~ 33215912 (+)
map1lc3a map1lc3a coding upstream 715482 32848895 ~ 32879742 (+)
unm_sa1614 LOC108424671 coding upstream 832608 32649541 ~ 32765702 (+)
LOC110528945 LOC106582597 coding downstream 19846 33616189 ~ 33617281 (+)
LOC110528946 LOC106582609 coding downstream 26894 33623237 ~ 33624475 (+)
si:dkey-43k4.5 LOC106582653 coding downstream 54294 33650637 ~ 33654546 (+)
LOC118965285 NA coding downstream 178538 33774881 ~ 33799728 (+)
tomm34 LOC106582656 coding downstream 205435 33801778 ~ 33807479 (+)
G599180 NA non-coding upstream 212912 33382054 ~ 33382312 (+)
G599177 NA non-coding upstream 216293 33378719 ~ 33378931 (+)
G599171 NA non-coding upstream 222945 33372039 ~ 33372279 (+)
G599164 NA non-coding upstream 230853 33364131 ~ 33364371 (+)
G599163 NA non-coding upstream 232518 33362356 ~ 33362706 (+)
G599332 NA non-coding downstream 6829 33603172 ~ 33603497 (+)
G599376 NA non-coding downstream 68361 33664704 ~ 33665016 (+)
G599379 NA non-coding downstream 71720 33668063 ~ 33668343 (+)
G599326 NA non-coding downstream 78430 33674773 ~ 33675146 (+)
G599328 NA non-coding downstream 79860 33676203 ~ 33677214 (+)
G599123 NA other upstream 299696 33290526 ~ 33295528 (+)
G599004 NA other upstream 358588 33235813 ~ 33236636 (+)
LOC110531742 LOC106594194 other upstream 1585294 32007023 ~ 32013203 (+)
G596297 NA other upstream 2512934 31081721 ~ 31082290 (+)
G596168 NA other upstream 2691337 30903179 ~ 30903887 (+)
G600013 NA other downstream 369946 33966289 ~ 33966755 (+)
G600431 NA other downstream 1163004 34759347 ~ 34759658 (+)
G600531 NA other downstream 1374785 34971128 ~ 34971405 (+)
LOC110527686 LOC106582662 other downstream 2977544 36573811 ~ 36582978 (+)
G602295 gli1 other downstream 3493281 37089624 ~ 37090756 (+)

Expression


Co-expression Network