LOC110527676 (stk4)


Basic Information

Item Value
gene id LOC110527676
gene name stk4
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 33677344 ~ 33746700 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609113.2
CTATCTTGAAGAAAACAATGGAGAACAAGGACAAAGTACAAATGAGGACACACCCACGCAGGCAGCTAAAGAAGCTCAGTGAAGACAGTTTAACCAAGCAGCCAGAGGAAGTCTTTGATGTGCTAGAGAAACTTGGCGAAGGAACACTGATAATAACGTGTCCACTGGATCCGTTGACTTCTCCCAGTTCAACATTCTCCTTCTGGTTCCTAAGAGAGTTATAGCACAAGACTTGCAACGCAAcgagaaacacaaaacataacgGTATTAACAATGTGGTCCTATGGCAGTGTATTTAAGGCCAACTATAAAGAGACTGGGGAGATTGTTGCCATCAAGCAGGTCCCTGTGGAGTCTGACCTGCAGGAGATCATCAAAGAGATTTCCATCATGCAGCAGTGTAACAGTCCCCATGTTGTGAGGTACTACGGAAGTTACTTTAAGAACAGTGACCTGTGGATCGTAATGGAGTACTGCGGAGCTGGCTCCGTCTCCGACATCATTCGCCTGCGCAACAAAACGCTAACAGAGGATGAGATCGCCACCATAGTGCAGTCCACACTGAAGGGACTGGAGTACCTGCACTTTATGAGGAAGATCCACAGAGACATCAAGGCAGGGAATATCCTGCTAAACGCAGAGGGCCAGGCCAAGCTGGCTGATTTTGGGGTGGCGGGACAGCTGACCGATACCATGGCCAAGCGGAACACAGTGATTGGCACACCATTCTGGATGGCCCCTGAGGTGATCCAGGAGATTGGTTATAACTGTGTGGCAGACATTTGGTCCCTGGGCATCACATCCATAGAAATGGCAGAGGGAAAGCCTCCCTATGCAGACATCCACCCTATGAGGGCCATATTTATGATTCCTACCAATCCTCCACCGACGTTCCGAAACCCAGACTTGTGGTCGGAGCTGTTCCaagaatttgtctcccagtgtcttgtGAAGAACCCAGAGAACAGAGCCACTGCCACACAGCTTCTACAGCATCCATTCATTAAGGCTGCTAAGCCCAGCAGCATCCTCAGAGCTTTGATCACAGATGCCATGGAAATTAAACTGAAGAAAGTGGAGGCcgagcagagagaacaggaccaagaggaCGAAGACAACtcgGACGAGGACGAGGTAGACCAGGGAACGATGGTGAGGGCGGGCACTAGCGATATGGGCACCATCCGGGAGGCCGGTTCGCTAGGGGGCACGGCGAGGACCATGATCGAGCAGAGCGACATGGGCACCATGGAGTCTCAGCTGGGCACCATGGTGATCAACTCAGACGATGACGAGGACGAGGAGGCCGGCACCATGAAACGGAGAGATGAGACCATGCAGCCCGCCAAGCCGTCCTTCCTGGAGTACTTTGAGCAGAAAGAGAAGGAGGCCAACTGTCACGACGACAGTGGAGAAGACCCAGGACACAACGCTGACAACCGCAAACTGCCTGCGGAGGGGGACCTAGAGGTGATGAAAACATGGAGCGTGGAGGAGCTGAGGTCACGGCTGGCCTCCCTGGACCCCCTGATGGAGCAGGAAATCAGGGAGATCCGCCAGCGCTACCTGGCCAAGCGCCAGCCCATCCTGGACGCCATCGAGGCCAAGAAGCGACGCCAGCAGAACCTCTGAGGCACTTTGACATGCCCATACTCAAACGTCTTAAGTGGACTCTTGGTCATTCACACTGGACAATGACACGGACAGATTACTTCTGTTCATTGCTTTGGACTCCTTCATTGCTGTTCTTGTCTTTTTCTTTATAGGAAAACCACTTAATGCCGCCAATCatgcatgttttttttgtcttaagttattttaatttttttgtttAGGGCACTTGAGACCTCAAGTATTCTTTTTTTTCACTCATGTGGTACAATTGTAGTATCTTTCACTGTTGGTACTCTTGAAACAACTGTTGCATTGGTAATTGAAAAATACTTTTATACCATCCACTGTATCATTTTGTGTGTTTTACCACTTATGTAATTTGGTACTTATTCCTTAATTTGTATTTAGGTTCTCCATACTATTCATTTTTCAGCACAGTACAATATCCTGCCAAAGGGAAGTTCAATTTACTTCatgggtatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgt
>XM_021609112.2
AGGCTATTCTCTTTGGCCCCCCTCATTCCGCGCCCAGTCTCAAAACGCTCTTCCTGGTTTTAACTGAATGTCAAGACACTTGGCTACAAATTGTCAAAAAAGTCAAAAGCAGCCTAGTCAGAGGAGGATGGAGCAACGAATGAGATGCCAGTAGTTTAAGGAAAATTTCAGATTTTGGAAACTTGGCTTTACACAATGAAACACGAATGAGAAGCTGAGAGACAACTGTAAAACATTCAGAAACGCGTATCATCGCAGCTGGCTAGCTTTACAGAAGTGAACTATCTTGAAGAAAACAATGGAGAACAAGGACAAAGTACAAATGAGGACACACCCACGCAGGCAGCTAAAGAAGCTCAGTGAAGACAGTTTAACCAAGCAGCCAGAGGAAGTCTTTGATGTGCTAGAGAAACTTGGCGAAGGGTCCTATGGCAGTGTATTTAAGGCCAACTATAAAGAGACTGGGGAGATTGTTGCCATCAAGCAGGTCCCTGTGGAGTCTGACCTGCAGGAGATCATCAAAGAGATTTCCATCATGCAGCAGTGTAACAGTCCCCATGTTGTGAGGTACTACGGAAGTTACTTTAAGAACAGTGACCTGTGGATCGTAATGGAGTACTGCGGAGCTGGCTCCGTCTCCGACATCATTCGCCTGCGCAACAAAACGCTAACAGAGGATGAGATCGCCACCATAGTGCAGTCCACACTGAAGGGACTGGAGTACCTGCACTTTATGAGGAAGATCCACAGAGACATCAAGGCAGGGAATATCCTGCTAAACGCAGAGGGCCAGGCCAAGCTGGCTGATTTTGGGGTGGCGGGACAGCTGACCGATACCATGGCCAAGCGGAACACAGTGATTGGCACACCATTCTGGATGGCCCCTGAGGTGATCCAGGAGATTGGTTATAACTGTGTGGCAGACATTTGGTCCCTGGGCATCACATCCATAGAAATGGCAGAGGGAAAGCCTCCCTATGCAGACATCCACCCTATGAGGGCCATATTTATGATTCCTACCAATCCTCCACCGACGTTCCGAAACCCAGACTTGTGGTCGGAGCTGTTCCaagaatttgtctcccagtgtcttgtGAAGAACCCAGAGAACAGAGCCACTGCCACACAGCTTCTACAGCATCCATTCATTAAGGCTGCTAAGCCCAGCAGCATCCTCAGAGCTTTGATCACAGATGCCATGGAAATTAAACTGAAGAAAGTGGAGGCcgagcagagagaacaggaccaagaggaCGAAGACAACtcgGACGAGGACGAGGTAGACCAGGGAACGATGGTGAGGGCGGGCACTAGCGATATGGGCACCATCCGGGAGGCCGGTTCGCTAGGGGGCACGGCGAGGACCATGATCGAGCAGAGCGACATGGGCACCATGGAGTCTCAGCTGGGCACCATGGTGATCAACTCAGACGATGACGAGGACGAGGAGGCCGGCACCATGAAACGGAGAGATGAGACCATGCAGCCCGCCAAGCCGTCCTTCCTGGAGTACTTTGAGCAGAAAGAGAAGGAGGCCAACTGTCACGACGACAGTGGAGAAGACCCAGGACACAACGCTGACAACCGCAAACTGCCTGCGGAGGGGGACCTAGAGGTGATGAAAACATGGAGCGTGGAGGAGCTGAGGTCACGGCTGGCCTCCCTGGACCCCCTGATGGAGCAGGAAATCAGGGAGATCCGCCAGCGCTACCTGGCCAAGCGCCAGCCCATCCTGGACGCCATCGAGGCCAAGAAGCGACGCCAGCAGAACCTCTGAGGCACTTTGACATGCCCATACTCAAACGTCTTAAGTGGACTCTTGGTCATTCACACTGGACAATGACACGGACAGATTACTTCTGTTCATTGCTTTGGACTCCTTCATTGCTGTTCTTGTCTTTTTCTTTATAGGAAAACCACTTAATGCCGCCAATCatgcatgttttttttgtcttaagttattttaatttttttgtttAGGGCACTTGAGACCTCAAGTATTCTTTTTTTTCACTCATGTGGTACAATTGTAGTATCTTTCACTGTTGGTACTCTTGAAACAACTGTTGCATTGGTAATTGAAAAATACTTTTATACCATCCACTGTATCATTTTGTGTGTTTTACCACTTATGTAATTTGGTACTTATTCCTTAATTTGTATTTAGGTTCTCCATACTATTCATTTTTCAGCACAGTACAATATCCTGCCAAAGGGAAGTTCAATTTACTTCatgggtatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttg
>XM_036983160.1
TAGGCTATTCTCTTTGGCCCCCCTCATTCCGCGCCCAGTCTCAAAACGCTCTTCCTGGTTTTAACTGAATGTCAAGACACTTGGCTACAAATTGTCAAAAAAGTCAAAAGCAGCCTAGTCAGAGGAGGATGGAGCAACGAATGAGATGCCAGTAGTTTAAGGAAAATTTCAGATTTTGGAAACTTGGCTTTACACAATGAAACACGAATGAGAAGCTGAGAGACAACTGTAAAACATTCAGAAACGCGTATCATCGCAGCTGGCTAGCTTTACAGAAGTGAACTATCTTGAAGAAAACAATGGAGAACAAGGACAAAGTACAAATGAGGACACACCCACGCAGGCAGCTAAAGAAGCTCAGTGAAGACAGTTTAACCAAGCAGCCAGAGGAAGTCTTTGATGTGCTAGAGAAACTTGGCGAAGGGTCCTATGGCAGTGTATTTAAGGCCAACTATAAAGAGACTGGGGAGATTGTTGCCATCAAGCAGGTCCCTGTGGAGTCTGACCTGCAGGAGATCATCAAAGAGATTTCCATCATGCAGCAGTGTAACAGTCCCCATGTTGTGAGGTACTACGGAAGTTACTTTAAGAACAGTGACCTGTGGATCGTAATGGAGTACTGCGGAGCTGGCTCCGTCTCCGACATCATTCGCCTGCGCAACAAAACGCTAACAGAGGATGAGATCGCCACCATAGTGCAGTCCACACTGAAGGGACTGGAGTACCTGCACTTTATGAGGAAGATCCACAGAGACATCAAGGCAGGGAATATCCTGCTAAACGCAGAGGGCCAGGCCAAGCTGGCTGATTTTGGGGTGGCGGGACAGCTGACCGATACCATGGCCAAGCGGAACACAGTGATTGGCACACCATTCTGGATGGCCCCTGAGGTGATCCAGGAGATTGGTTATAACTGTGTGGCAGACATTTGGTCCCTGGGCATCACATCCATAGAAATGGCAGAGGGAAAGCCTCCCTATGCAGACATCCACCCTATGAGGGCCATATTTATGATTCCTACCAATCCTCCACCGACGTTCCGAAACCCAGACTTGTGGTCGGAGCTGTTCCaagaatttgtctcccagtgtcttgtGAAGAACCCAGAGAACAGAGCCACTGCCACACAGCTTCTACAGCATCCATTCATTAAGGCTGCTAAGCCCAGCAGCATCCTCAGAGCTTTGATCACAGATGCCATGGAAATTAAACTGAAGAAAGTGGAGGCcgagcagagagaacaggaccaagaggaCGAAGACAACtcgGACGAGGACGAGGTAGACCAGGGAACGATGGTGAGGGCGGGCACTAGCGATATGGGCACCATCCGGGAGGCCGGTTCGCTAGGGGGCACGGCGAGGACCATGATCGAGCAGAGCGACATGGGCACCATGGAGTCTCAGCTGGGCACCATGGTGATCAACTCAGACGATGACGAGGACGAGGAGGCCGGCACCATGAAACGGAGAGATGAGACCATGCAGCCCGCCAAGCCGTCCTTCCTGGAGTACTTTGAGCAGAAAGAGAAGGAGGCCAACTGTCACGACGACAGTGGAGAAGACCCAGGACACAACGCTGACAACCGCAAACTGCCTGCGGAGGGGGACCTAGAGGTGcatgccagggcggattgcagaggtcttgaagcAGAAGGGGCAACACTGCatatattgactctttgcatcatcaacttcatgtaattgtcaataaaagacTTTGACACTTataaaatgc

Function

symbol description
stk4 Enables several functions, including ATP binding activity; magnesium ion binding activity; and protein homodimerization activity. Involved in several processes, including hippo signaling; negative regulation of canonical Wnt signaling pathway; and peptidyl-serine phosphorylation. Acts upstream of or within several processes, including positive regulation of peptidyl-serine phosphorylation; protein autophosphorylation; and protein stabilization. Located in cytosol and nuclear body. Part of protein-containing complex.

NR:

description
serine/threonine-protein kinase 4 isoform X1

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0007165 signal transduction biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K04412 STK3, MST2; serine/threonine kinase 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609113.2 False 2193 mRNA 0.48 12 33677344 33746418
XM_021609112.2 False 2337 mRNA 0.48 11 33677345 33746699
XM_036983160.1 True 1737 mRNA 0.50 11 33682172 33746700

Neighbor

gene id symbol gene type direction distance location
LOC118965409 NA coding downstream 176083 33501207 ~ 33501261 (-)
oser1 oser1 coding downstream 315100 33332996 ~ 33362244 (-)
LOC118965284 NA coding downstream 334753 33340670 ~ 33342591 (-)
gdf5 gdf5 coding downstream 527519 33146428 ~ 33149825 (-)
LOC110527668 LOC106582647 coding downstream 678471 32959859 ~ 32998873 (-)
LOC110527679 LOC106565035 coding upstream 23371 33770050 ~ 33774908 (-)
ywhaba LOC100136192 coding upstream 70523 33817223 ~ 33835858 (-)
abraa LOC106582659 coding upstream 205275 33951832 ~ 33958325 (-)
LOC118965352 NA coding upstream 1352707 35099407 ~ 35200098 (-)
LOC118965353 NA coding upstream 1865689 35612389 ~ 35612805 (-)
G599788 NA non-coding downstream 126 33674546 ~ 33677297 (-)
G599842 NA non-coding downstream 9985 33667130 ~ 33667359 (-)
G599841 NA non-coding downstream 11929 33665210 ~ 33665415 (-)
G599839 NA non-coding downstream 13050 33664085 ~ 33664294 (-)
G599795 NA non-coding downstream 69059 33608064 ~ 33608285 (-)
G599899 NA non-coding upstream 43538 33790238 ~ 33790444 (-)
G599901 NA non-coding upstream 44954 33791654 ~ 33826037 (-)
G599935 NA non-coding upstream 104513 33851213 ~ 33851488 (-)
G599946 NA non-coding upstream 116219 33862919 ~ 33863137 (-)
G599955 NA non-coding upstream 135968 33882668 ~ 33882919 (-)
G599058 NA other downstream 437549 33237359 ~ 33239795 (-)
G598354 NA other downstream 1257196 32418190 ~ 32420148 (-)
G596433 NA other downstream 2598026 31078512 ~ 31079318 (-)
G596352 NA other downstream 2740730 30936165 ~ 30936614 (-)
G600721 NA other upstream 867792 34614492 ~ 34614875 (-)
G600872 NA other upstream 1218747 34965447 ~ 34966786 (-)
G600881 NA other upstream 1255180 35001880 ~ 35055228 (-)
G601245 NA other upstream 2013999 35760699 ~ 35761270 (-)

Expression


Co-expression Network