tomm34 (LOC106582656)


Basic Information

Item Value
gene id tomm34
gene name LOC106582656
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 33801778 ~ 33807479 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609115.2
CAAATCCGTGACCCGGAAGTACTTATTTGTTCTTGCCTTTTTCAATCACAGCGGTTTTGCCAATAACGGGAGTTAACGTGATTCTGAAAACCCACTGATCGATGCTCGTGATTAGCTAAAAAACAAAGATGTCACAGAAGCGTCGTTCCCAGTCTTGGACAGAGTTGAAACAAGCAGGCAACGAATTCTTTAAAACTGGACAGTATGGGGAGGCTGCTTCTATTTACAGCCAGGCTATCAAAGAAGTGGAGAAGTCAGGAAAGAAGAATCCAGAGGATCTTAGTATCCTGTATTCTAACCGTGCAGCCAGTTATCTGAAGGATGGAAATTGTTGGGAGTGTGTGAAGGACTGTACAGTaTCTCTTGACCTAGTTCCATTTGGCATCAAGCCTCTCCTTCGCCGGGCTGCAGCGTATGAAGCTTTGGAGAGATACAGATTAGCCTATGTGGACTACAAGACAGCCTTACAGATCGACTGTAACATACCTGCAGCCCATGATGGTACCAGCAGAATGACGAAGTGTCTGACAGAGGTGGATGGACTCTCATGGCGAGAGAAGCTCCCACTTATTCCCACTGTTCCGATGGCCATCAAAGAAAAATTGTCTCTGGCAACAAGCCAACAAACAAAGCAACACAATGGCACCAGAGAAAATGAGAAATCTGTCCCAGGAGAGGATTCCATTAAAAAAGCCCTAACCCTGAAAAAGGAAGGCAATGCGCAGGTGAAAAAAGGAGAGTACAAGAAAGCCATAGAGAAATACACTCAGAGCCTCAAACACAATTCCTCAGAAATCACAACCTACACAAATAGGGCACTTTGCTACCTCTCTTTGAAGATGTACAAGGAGGCAGTGCAAGATTGTGGAGAGGCCCTGCGACTCGACTCCGCTAATATCAAGGCACTGTACAGACGAGCACAGGCACACAAGGAGCTGAATGACTACAAAGCTTGCATTGAAGATCTAAACAGCTTGCTGAAAGTTGAGCCAAAGAACACAGCCGGACAGAATTTACTGCTGGAAGTGCAAAAGAAGAAATGAGCTTGTGATTCGGATGGTTGCCTGTGGATGTGAACGACCCTACGCTGACCTGGTGTACATGCCTGAAGTGCCTGTATTCACTCACAGAAGCAGGTTTTCCAATCTATTTCCTGCCCTGTTTAACTTAAATCCACTCAAGATGGAGTATTGCTTTGACTACTACAGGGGAAGCACAGTCAATGCAGTGCATATTTAGCCTTCATATACATCATGCAATCACTGCATGAAACTGAAAATATAGCATTCAACCATTGTTTTACAAGGACTATGCATTTGTATGTATTTCCACTAGCATAAGAGATTTTCACGATCAACTACTGTTGTAGTTGAAGATATAGtacacccaaattacaaaattacattggTTTTACTTACAGACTTACTCTGTAAGCATTCTATGGACGAGGTAGGACAGCAATCCATGCATTGTTTTTGTTTACCTGGTcactgtttcaaatgctaactttttagcattcatggcacaaatccaatgcaagtcaatcGTACCTATATTAGCATTCCCGCACTTAATGTCCAAATCATTTTAAGTAACTTATGAGTTACGCAATCAATATTTAGATACTttaggatgatttggacatgaagcaTGACATTCTAATATAAGCACCTATTTATATTATCTTTAATACATCTATAggtaaactatccctttaagatcgTAGTTATCTTGGGCTTCCGAGTGGCACAgaggtctaaggtactgcatcttagtgctagaggcgtcactcaCTACAGAcacggccatgattgggagtcccatagggcggcgcacaattggcccagcgtcgtccgggtttggccggtgttggccgtcattgtaattaagaatttgttcttctgacttgcctagtttaaataaaggttaaataaatgaacATTTTATGGGTATTTTCATTGAGTCGAGGAAAGTAACACTATACCAGAGAAACAGATGGTTACCGTATTATTGTGAATTTAAGAGAATATTGAAACATCATTACCACCTGTATCACCTAACATGTTGACAATTCTATCAGTAATGCATAATCTTTAATGTAATTTTTTTTCACTAATTAGGATTCAGGAAACAAATGGGACAAATCAAACTTTCATCCTCCCTGATGGGGGCTGAATTGGATGATACTAGTTGTTTTCCATTGTCCAGTTGTTGCTTCAATTAcggaatgtttgaacatcttttTTGTTAAATTTATCTTTGGAATATCAATGCTTTTGCAGTGGTGACACAAGTTAGTGTGGGTGTTTTACATTTCAGCAATGTCATCTGGGTATATTGGTGATTGCAGCACTTTTTTTTCAATTCTGTGAAATGTTGGAACGCTTACCTCATGgtgcaaaataataaagataTGACTTTATACACTG
>XM_036983162.1
TTCAATCACAGCGGTTTTGCCAATAACGGGAGTTAACGTGATTCTGAAAACCCACTGATCGATGCTCGTGATTAGCTAGTAAACGAGACACGTATTACACCTCTATAGCTAACTTGTTTAAGATATTGAGTTTACTAGCTAACATTATTAGTTAGACGATTTGCGGACGAGTACAGTAGATTATAGCTAGTTACACAACCGGCTTGCCCAGATATCAATATTAATTCAGTCACTGAAAAACAAAGATGTCACAGAAGCGTCGTTCCCAGTCTTGGACAGAGTTGAAACAAGCAGGCAACGAATTCTTTAAAACTGGACAGTATGGGGAGGCTGCTTCTATTTACAGCCAGGCTATCAAAGAAGTGGAGAAGTCAGGAAAGAAGAATCCAGAGGATCTTAGTATCCTGTATTCTAACCGTGCAGCCAGTTATCTGAAGGATGGAAATTGTTGGGAGTGTGTGAAGGACTGTACAGTaTCTCTTGACCTAGTTCCATTTGGCATCAAGCCTCTCCTTCGCCGGGCTGCAGCGTATGAAGCTTTGGAGAGATACAGATTAGCCTATGTGGACTACAAGACAGCCTTACAGATCGACTGTAACATACCTGCAGCCCATGATGGTACCAGCAGAATGACGAAGTGTCTGACAGAGGTGGATGGACTCTCATGGCGAGAGAAGCTCCCACTTATTCCCACTGTTCCGATGGCCATCAAAGAAAAATTGTCTCTGGCAACAAGCCAACAAACAAAGCAACACAATGGCACCAGAGAAAATGAGAAATCTGTCCCAGGAGAGGATTCCATTAAAAAAGCCCTAACCCTGAAAAAGGAAGGCAATGCGCAGGTGAAAAAAGGAGAGTACAAGAAAGCCATAGAGAAATACACTCAGAGCCTCAAACACAATTCCTCAGAAATCACAACCTACACAAATAGATGTACAAGGAGGCAGTGCAAGATTGTGGAGAGGCCCTGCGACTCGACTCCGCTAATATCAAGGCACTGTACAGACGAGCACAGGCACACAAGGAGCTGAATGTGAGA
>XM_021609114.1
TTCAATCACAGCGGTTTTGCCAATAACGGGAGTTAACGTGATTCTGAAAACCCACTGATCGATGCTCGTGATTAGCTAGTAAACGAGACACGTATTACACCTCTATAGCTAACTTGTTTAAGATATTGAGTTTACTAGCTAACATTATTAGTTAGACGATTTGCGGACGAGTACAGTAGATTATAGCTAGTTACACAACCGGCTTGCCCAGATATCAATATTAATTCAGTCACTGAAAAACAAAGATGTCACAGAAGCGTCGTTCCCAGTCTTGGACAGAGTTGAAACAAGCAGGCAACGAATTCTTTAAAACTGGACAGTATGGGGAGGCTGCTTCTATTTACAGCCAGGCTATCAAAGAAGTGGAGAAGTCAGGAAAGAAGAATCCAGAGGATCTTAGTATCCTGTATTCTAACCGTGCAGCCAGTTATCTGAAGGATGGAAATTGTTGGGAGTGTGTGAAGGACTGTACAGTaTCTCTTGACCTAGTTCCATTTGGCATCAAGCCTCTCCTTCGCCGGGCTGCAGCGTATGAAGCTTTGGAGAGATACAGATTAGCCTATGTGGACTACAAGACAGCCTTACAGATCGACTGTAACATACCTGCAGCCCATGATGGTACCAGCAGAATGACGAAGTGTCTGACAGAGGTGGATGGACTCTCATGGCGAGAGAAGCTCCCACTTATTCCCACTGTTCCGATGGCCATCAAAGAAAAATTGTCTCTGGCAACAAGCCAACAAACAAAGCAACACAATGGCACCAGAGAAAATGAGAAATCTGTCCCAGGAGAGGATTCCATTAAAAAAGCCCTAACCCTGAAAAAGGAAGGCAATGCGCAGGTGAAAAAAGGAGAGTACAAGAAAGCCATAGAGAAATACACTCAGAGCCTCAAACACAATTCCTCAGAAATCACAACCTACACAAATAGGGCACTTTGCTACCTCTCTTTGAAGATGTACAAGGAGGCAGTGCAAGATTGTGGAGAGGCCCTGCGACTCGACTCCGCTAATATCAAGGCACTGTACAGACGAGCACAGGCACACAAGGAGCTGAATGACTACAAAGCTTGCATTGAAGATCTAAACAGCTTGCTGAAAGTTGAGCCAAAGAACACAGCCGGACAGAATTTACTGCTGGAAGTGCAAAAGAAGAAATGAGCTTGTGATTCGGATGGTTGCCTGTGGATGTGAACGACCCTACGCTGACCTGGTGTACATGCCTGAAGTGCCTGTATTCACTCACAGAAGCAGGTTTTCCAATCTATTTCCTGCCCTGTTTAACTTAAATCCACTCAAGATGGAGTATTGCTTTGACTACTACAGGGGAAGCACAGTCAATGCAGTGCATATTTAGCCTTCATATACATCATGCAATCACTGCATGAAACTGAAAATATAGCATTCAACCATTGTTTTACAAGGACTATGCATTTGTATGTATTTCCACTAGCATAAGAGATTTTCACGATCAACTACTGTTGTAGTTGAAGATATAGtacacccaaattacaaaattacattggTTTTACTTACAGACTTACTCTGTAAGCATTCTATGGACGAGGTAGGACAGCAATCCATGCATTGTTTTTGTTTACCTGGTcactgtttcaaatgctaactttttagcattcatggcacaaatccaatgcaagtcaatcGTACCTATATTAGCATTCCCGCACTTAATGTCCAAATCATTTTAAGTAACTTATGAGTTACGCAATCAATATTTAGATACTttaggatgatttggacatgaagcaTGACATTCTAATATAAGCACCTATTTATATTATCTTTAATACATCTATAggtaaactatccctttaagatcgTAGTTATCTTGGGCTTCCGAGTGGCACAgaggtctaaggtactgcatcttagtgctagaggcgtcactcaCTACAGAcacggccatgattgggagtcccatagggcggcgcacaattggcccagcgtcgtccgggtttggccggtgttggccgtcattgtaattaagaatttgttcttctgacttgcctagtttaaataaaggttaaataaatgaacATTTTATGGGTATTTTCATTGAGTCGAGGAAAGTAACACTATACCAGAGAAACAGATGGTTACCGTATTATTGTGAATTTAAGAGAATATTGAAACATCATTACCACCTGTATCACCTAACATGTTGACAATTCTATCAGTAATGCATAATCTTTAATGTAATTTTTTTTCACTAATTAGGATTCAGGAAACAAATGGGACAAATCAAACTTTCATCCTCCCTGATGGGGGCTGAATTGGATGATACTAGTTGTTTTCCATTGTCCAGTTGTTGCTTCAATTAcggaatgtttgaacatcttttTTGTTAAATTTATCTTTGGAATATCAATGCTTTTGCAGTGGTGACACAAGTTAGTGTGGGTGTTTTACATTTCAGCAATGTCATCTGGGTATATTGGTGATTGCAGCACTTTTTTTTCAATTCTGTGAAATGTTGGAACGCTTACCTCATGgtgcaaaataataaagataTGACTTTATACACTG
>XM_036983161.1
TTCAATCACAGCGGTTTTGCCAATAACGGGAGTTAACGTGATTCTGAAAACCCACTGATCGATGCTCGTGATTAGCTAGTAAACGAGACACGTATTACACCTCTATAGCTAACTTGTTTAAGATATTGAGTTTACTAGCTAACATTATTAGTTAGACGATTTGCGGACGAGTACAGTAGATTATAGCTAGTTACACAACCGGCTTGCCCAGATATCAATATTAATTCAGTCACTGGTAAATTGAGACCTAGCTGGATACACTAATACTATGCTAGTTAGCTACTGTATTTTTAAGGAATTAGCTCAAATTATGCTGGCCAGATTATTCAAGAAAAACAAAGATGTCACAGAAGCGTCGTTCCCAGTCTTGGACAGAGTTGAAACAAGCAGGCAACGAATTCTTTAAAACTGGACAGTATGGGGAGGCTGCTTCTATTTACAGCCAGGCTATCAAAGAAGTGGAGAAGTCAGGAAAGAAGAATCCAGAGGATCTTAGTATCCTGTATTCTAACCGTGCAGCCAGTTATCTGAAGGATGGAAATTGTTGGGAGTGTGTGAAGGACTGTACAGTaTCTCTTGACCTAGTTCCATTTGGCATCAAGCCTCTCCTTCGCCGGGCTGCAGCGTATGAAGCTTTGGAGAGATACAGATTAGCCTATGTGGACTACAAGACAGCCTTACAGATCGACTGTAACATACCTGCAGCCCATGATGGTACCAGCAGAATGACGAAGTGTCTGACAGAGGTGGATGGACTCTCATGGCGAGAGAAGCTCCCACTTATTCCCACTGTTCCGATGGCCATCAAAGAAAAATTGTCTCTGGCAACAAGCCAACAAACAAAGCAACACAATGGCACCAGAGAAAATGAGAAATCTGTCCCAGGAGAGGATTCCATTAAAAAAGCCCTAACCCTGAAAAAGGAAGGCAATGCGCAGGTGAAAAAAGGAGAGTACAAGAAAGCCATAGAGAAATACACTCAGAGCCTCAAACACAATTCCTCAGAAATCACAACCTACACAAATAGGGCACTTTGCTACCTCTCTTTGAAGATGTACAAGGAGGCAGTGCAAGATTGTGGAGAGGCCCTGCGACTCGACTCCGCTAATATCAAGGCACTGTACAGACGAGCACAGGCACACAAGGAGCTGAATGACTACAAAGCTTGCATTGAAGATCTAAACAGCTTGCTGAAAGTTGAGCCAAAGAACACAGCCGGACAGAATTTACTGCTGGAAGTGCAAAAGAAGAAATGAGCTTGTGATTCGGATGGTTGCCTGTGGATGTGAACGACCCTACGCTGACCTGGTGTACATGCCTGAAGTGCCTGTATTCACTCACAGAAGCAGGTTTTCCAATCTATTTCCTGCCCTGTTTAACTTAAATCCACTCAAGATGGAGTATTGCTTTGACTACTACAGGGGAAGCACAGTCAATGCAGTGCATATTTAGCCTTCATATACATCATGCAATCACTGCATGAAACTGAAAATATAGCATTCAACCATTGTTTTACAAGGACTATGCATTTGTATGTATTTCCACTAGCATAAGAGATTTTCACGATCAACTACTGTTGTAGTTGAAGATATAGtacacccaaattacaaaattacattggTTTTACTTACAGACTTACTCTGTAAGCATTCTATGGACGAGGTAGGACAGCAATCCATGCATTGTTTTTGTTTACCTGGTcactgtttcaaatgctaactttttagcattcatggcacaaatccaatgcaagtcaatcGTACCTATATTAGCATTCCCGCACTTAATGTCCAAATCATTTTAAGTAACTTATGAGTTACGCAATCAATATTTAGATACTttaggatgatttggacatgaagcaTGACATTCTAATATAAGCACCTATTTATATTATCTTTAATACATCTATAggtaaactatccctttaagatcgTAGTTATCTTGGGCTTCCGAGTGGCACAgaggtctaaggtactgcatcttagtgctagaggcgtcactcaCTACAGAcacggccatgattgggagtcccatagggcggcgcacaattggcccagcgtcgtccgggtttggccggtgttggccgtcattgtaattaagaatttgttcttctgacttgcctagtttaaataaaggttaaataaatgaacATTTTATGGGTATTTTCATTGAGTCGAGGAAAGTAACACTATACCAGAGAAACAGATGGTTACCGTATTATTGTGAATTTAAGAGAATATTGAAACATCATTACCACCTGTATCACCTAACATGTTGACAATTCTATCAGTAATGCATAATCTTTAATGTAATTTTTTTTCACTAATTAGGATTCAGGAAACAAATGGGACAAATCAAACTTTCATCCTCCCTGATGGGGGCTGAATTGGATGATACTAGTTGTTTTCCATTGTCCAGTTGTTGCTTCAATTAcggaatgtttgaacatcttttTTGTTAAATTTATCTTTGGAATATCAATGCTTTTGCAGTGGTGACACAAGTTAGTGTGGGTGTTTTACATTTCAGCAATGTCATCTGGGTATATTGGTGATTGCAGCACTTTTTTTTCAATTCTGTGAAATGTTGGAACGCTTACCTCATGgtgcaaaataataaagataTGACTTTATACACTG

Function

NR:

description
mitochondrial import receptor subunit TOM34

GO: NA

KEGG:

id description
K17766 TOM34; mitochondrial import receptor subunit TOM34

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609115.2 False 2429 mRNA 0.41 8 33801778 33807479
XM_036983162.1 False 1039 mRNA 0.44 7 33801818 33805910
XM_021609114.1 False 2546 mRNA 0.41 8 33801818 33807479
XM_036983161.1 True 2642 mRNA 0.40 8 33801818 33807479

Neighbor

gene id symbol gene type direction distance location
LOC118965285 NA coding upstream 2050 33774881 ~ 33799728 (+)
si:dkey-43k4.5 LOC106582653 coding upstream 147232 33650637 ~ 33654546 (+)
LOC110528946 LOC106582609 coding upstream 177303 33623237 ~ 33624475 (+)
LOC110528945 LOC106582597 coding upstream 184497 33616189 ~ 33617281 (+)
or134-1 LOC106582596 coding upstream 205435 33595224 ~ 33596343 (+)
rims4 rims4 coding downstream 76770 33884249 ~ 33944568 (+)
LOC110517647 pcdh9 coding downstream 724497 34531976 ~ 35053552 (+)
LOC118965286 NA coding downstream 918922 34726401 ~ 34728810 (+)
LOC118965354 NA coding downstream 2198932 36006411 ~ 36024368 (+)
LOC110527683 LOC106582660 coding downstream 2662837 36470316 ~ 36536037 (+)
G599474 NA non-coding upstream 12864 33788517 ~ 33788914 (+)
G599473 NA non-coding upstream 13806 33787701 ~ 33787972 (+)
G599429 NA non-coding upstream 52638 33746035 ~ 33749140 (+)
G599328 NA non-coding upstream 124564 33676203 ~ 33677214 (+)
G599326 NA non-coding upstream 126632 33674773 ~ 33675146 (+)
G599442 LOC100136192 non-coding downstream 8227 33815706 ~ 33836048 (+)
G599504 NA non-coding downstream 51147 33858626 ~ 33859090 (+)
G599506 NA non-coding downstream 52647 33860126 ~ 33860483 (+)
G599521 NA non-coding downstream 74481 33881960 ~ 33882217 (+)
G599551 NA non-coding downstream 144409 33951888 ~ 33952990 (+)
G599123 NA other upstream 506250 33290526 ~ 33295528 (+)
G599004 NA other upstream 565142 33235813 ~ 33236636 (+)
LOC110531742 LOC106594194 other upstream 1791848 32007023 ~ 32013203 (+)
G596297 NA other upstream 2719488 31081721 ~ 31082290 (+)
G596168 NA other upstream 2897891 30903179 ~ 30903887 (+)
G600013 NA other downstream 158810 33966289 ~ 33966755 (+)
G600431 NA other downstream 951868 34759347 ~ 34759658 (+)
G600531 NA other downstream 1163649 34971128 ~ 34971405 (+)
LOC110527686 LOC106582662 other downstream 2766408 36573811 ~ 36582978 (+)
G602295 gli1 other downstream 3282145 37089624 ~ 37090756 (+)

Expression


Co-expression Network