ywhaba (LOC100136192)


Basic Information

Item Value
gene id ywhaba
gene name LOC100136192
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 33817223 ~ 33835858 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001124468.1
GGACAGCTTGGTACTCCCATCGTTTAGAGAAAAAGCAGGATTCAAAATACAAGCTAAATCCCCGACATGGACAAGAACGACCTGGTACAGAAGGCTAAGCTGGCCGAGCAGGCCGAACGCTATGACGACATGGCGGCGGCGATGAAAGCGGTGACGGAGCAGGGCGGCGAGCTCTCCAACGAGGAGCGCAACCTGCTGTCGGTGGCCTACAAGAATGTCGTGGGGGCGCGTCGCTCCTCCTGGCGCGTCATCTCCAGCATCGAGCAGAAGACCGAAGGCAACGAGAAGAAGCAGCAGATGGCCCGTGAATACCGCGAGAAGATTGAGGCCGAGCTGCAGGACATCTGCAAGGATGTGCTGGCACTCCTCGACAATTACCTCATTGCCAATGCGACTCAGGCAGAAAGCAAGGTGTTCTACCTTAAAATGAAAGGTGACTACTACAGATATCTGTCCGAGGTGGCATCTGGAGACTCAAAAAAGACCACAGTGGAGAACTCCCAGCAGGCCTACCAGGAGGCATTTGACATCAGCAAGAAGGACATGCAGCCGACACACCCCATCAGGCTGGGCCTCGCTCTCAACTTTTCCGTCTTCTATTACGAGATCCTCAACTCCCCCGAGCAAGCCTGCAGTTTGGCGAAGGCGGCTTTCGATGAAGCGATCGCCGAACTTGACACCTTGAACGAGGACTCTTACAAAGACAGCACCTTGATCATGCAGCTACTAAGGGACAATCTCACTCTGTGGACATCAGAAAACCAGGGTGACGAGGGGGATGCCGGCGAAGGGGAGAACTAAAGGCGTTGCACATCACTGTTAATCCACCCACACTCTTCTTTCTCTTATTTTACACATATACAGCCCATACATCCCTGCTCCATCCAGCCCCCTCCCTTTCTGTATGACAAGCAGCATGAATTGTACCTGACCTACCAGTTGTGCCCTTTCTCAGATATGCTCAGTTGTTAACAAGCAGAGTATTGTTTTGTGAGGATAAAAGAAAAAGAAATTTACCCGGTTGAGTGGCAAGGCCATTCACCCCCCCTTCCCCTTTTGATTCTCTCCTAACATTTCATAAAGATATGTTCTTTCACCTAGCAAGATATGCATTTTAGTATCCTTTTTTGCTTTGCTAGTGTACTGGCGATTGCTGGTTTTTATTCAAAAAGGTCATTAAACTGTCCGTTTATTTTCAAC

Function

NR:

description
14-3-3 protein beta/alpha-1

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0005737 cytoplasm cellular_component
GO:0004497 monooxygenase activity molecular_function
GO:0019904 protein domain specific binding molecular_function

KEGG:

id description
K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001124468.1 True 1200 mRNA 0.50 6 33817223 33835858

Neighbor

gene id symbol gene type direction distance location
LOC110527679 LOC106565035 coding downstream 42315 33770050 ~ 33774908 (-)
LOC110527676 stk4 coding downstream 70523 33677344 ~ 33746700 (-)
LOC118965409 NA coding downstream 315962 33501207 ~ 33501261 (-)
oser1 oser1 coding downstream 454979 33332996 ~ 33362244 (-)
LOC118965284 NA coding downstream 474632 33340670 ~ 33342591 (-)
abraa LOC106582659 coding upstream 116117 33951832 ~ 33958325 (-)
LOC118965352 NA coding upstream 1263549 35099407 ~ 35200098 (-)
LOC118965353 NA coding upstream 1776531 35612389 ~ 35612805 (-)
LOC110527685 LOC106582661 coding upstream 2702280 36538138 ~ 36559214 (-)
LOC110528947 LOC106582664 coding upstream 2902833 36738691 ~ 36858144 (-)
G599899 NA non-coding downstream 26779 33790238 ~ 33790444 (-)
G599874 NA non-coding downstream 73789 33739312 ~ 33743434 (-)
G599873 NA non-coding downstream 73989 33739013 ~ 33743234 (-)
G599788 NA non-coding downstream 140005 33674546 ~ 33677297 (-)
G599842 NA non-coding downstream 149864 33667130 ~ 33667359 (-)
G599935 NA non-coding upstream 15355 33851213 ~ 33851488 (-)
G599946 NA non-coding upstream 27061 33862919 ~ 33863137 (-)
G599955 NA non-coding upstream 46810 33882668 ~ 33882919 (-)
G599961 NA non-coding upstream 75014 33910872 ~ 33938411 (-)
G599058 NA other downstream 577428 33237359 ~ 33239795 (-)
G598354 NA other downstream 1397075 32418190 ~ 32420148 (-)
G596433 NA other downstream 2737905 31078512 ~ 31079318 (-)
G600721 NA other upstream 778634 34614492 ~ 34614875 (-)
G600872 NA other upstream 1129589 34965447 ~ 34966786 (-)
G600881 NA other upstream 1166022 35001880 ~ 35055228 (-)
G601245 NA other upstream 1924841 35760699 ~ 35761270 (-)
G604485 NA other upstream 4753297 38589155 ~ 38597519 (-)

Expression


Co-expression Network