LOC118965354


Basic Information

Item Value
gene id LOC118965354
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 36006411 ~ 36024368 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036984428.1
AtgtccaggagggggagcagtgAGAAGTGGTATCTCCAGGaggtagagcagtggtatgtccagGAGGTAGAGCAGTGGTATCTCCAGGAGGTAGAGCAGCCGTATCTCCAAGaggtagagcagtggtatgtccagGAGGTAGAGAAGTGGTATCTCCAGGaggtagagcagtggtatgtccagGAGGTAGAGAAGTGGTATGTCCAGGAGGTAGAGAAGTGGTATGTCCCTGaggtagagcagtggtatgtccagGAGGTAGAGAAGTGGTATGTCCAGGAGGTAGAGAAGTGGTATCTCCAGGaggtagagcagtggtatgtccagGAGGTAGAGAAGTGGTATGTCCAGGAGGTAGAGAAGTGGTATGTCCAGGAGGTAGAGAAGTGGTATGTCCAGGAGGTAGAGAAGTGGTATCTCCAGGaggtagagcagtggtatgtccagGAGGTAGAGAAGTGGTATGTCCAGGAGGTAGAGAAGTGGTATGTCCCTGAGgaagtagaagaagtagtagaagaagaagaagtagaagaagaagaagtagaagaagaagaagaagaagaagaagtagtagtagaagaagaagaagtagaagaagaagaagaagtagaagaagaagaagaagtagaagaagaagaagtagaagaagaagaagaagaagaagaagtagaagaagaagaagtagaagaagaagaagaagaagaagaagtagaagaagaagaagtagaagaagtagtagaagaagaagaagtagaagaagaagaagtagaagaagaagaagaagtagtagaagaagaagaagtagaagaagaagaagaagtagaagaagaagaagtagaagaagaagaagaagaagaagaagtagaagaagtagtagaagaagaagaagtagaagaagaagaagtagaagaagaagaagaagaagaagaagaagaagaagaagaagtagtagtagaagaagaagaagtagaagaagaagaagtagtagtagaagaagaagaagtagaagaagaagaagtagaagaagaagaagaagtagtagaagaagaagaagtagaagaagaagaagtagaagaagaagaagaagaagtagaagaagaagaataa

Function

NR:

description
PREDICTED: prisilkin-39-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036984428.1 True 1110 mRNA 0.42 4 36006411 36024368

Neighbor

gene id symbol gene type direction distance location
LOC110517647 pcdh9 coding upstream 952859 34531976 ~ 35053552 (+)
LOC118965286 NA coding upstream 1277601 34726401 ~ 34728810 (+)
rims4 rims4 coding upstream 2061843 33884249 ~ 33944568 (+)
tomm34 LOC106582656 coding upstream 2198932 33801778 ~ 33807479 (+)
LOC118965285 NA coding upstream 2206683 33774881 ~ 33799728 (+)
LOC110527683 LOC106582660 coding downstream 445948 36470316 ~ 36536037 (+)
LOC110527684 NA coding downstream 486626 36510994 ~ 36517194 (+)
LOC110527686 LOC106582662 coding downstream 549443 36573811 ~ 36582978 (+)
LOC110527688 LOC106582663 coding downstream 644433 36668801 ~ 36679505 (+)
LOC110527690 LOC106582665 coding downstream 844372 36868740 ~ 36896763 (+)
G601379 NA non-coding upstream 6805 35998856 ~ 35999606 (+)
G601377 NA non-coding upstream 9772 35996064 ~ 35996639 (+)
G601372 NA non-coding upstream 16011 35989869 ~ 35990400 (+)
G601368 NA non-coding upstream 31495 35974580 ~ 35974916 (+)
G601361 NA non-coding upstream 40787 35964999 ~ 35965624 (+)
G601389 NA non-coding downstream 15419 36039787 ~ 36040421 (+)
G601431 NA non-coding downstream 59318 36083686 ~ 36084015 (+)
G601448 NA non-coding downstream 76057 36100425 ~ 36100844 (+)
G601451 NA non-coding downstream 77825 36102193 ~ 36103050 (+)
G601478 NA non-coding downstream 133723 36158091 ~ 36196201 (+)
G600531 NA other upstream 1035006 34971128 ~ 34971405 (+)
G600431 NA other upstream 1246753 34759347 ~ 34759658 (+)
G600013 NA other upstream 2039656 33966289 ~ 33966755 (+)
G599123 NA other upstream 2710883 33290526 ~ 33295528 (+)
G599004 NA other upstream 2769775 33235813 ~ 33236636 (+)
G602295 gli1 other downstream 1065256 37089624 ~ 37090756 (+)
G604207 NA other downstream 2474663 38499031 ~ 38499662 (+)
G604258 NA other downstream 2560106 38584474 ~ 38594822 (+)
G606400 LOC105027254 other downstream 4102166 40126534 ~ 40141972 (+)

Expression


Co-expression Network