LOC118965405


Basic Information

Item Value
gene id LOC118965405
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 37535064 ~ 37535117 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052731.1
GAAAtttgctcttttagtatttctccagtaggtttcctaAAGGAGAAAGCCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052731.1 True 54 mRNA 0.41 1 37535064 37535117

Neighbor

gene id symbol gene type direction distance location
LOC110527697 r3hdm2 coding upstream 192434 37264393 ~ 37342630 (+)
arhgap9 LOC106582667 coding upstream 521010 36955176 ~ 37014054 (+)
LOC110527691 LOC106582666 coding upstream 622052 36907551 ~ 36913012 (+)
LOC110527690 LOC106582665 coding upstream 638301 36868740 ~ 36896763 (+)
LOC110527688 LOC106582663 coding upstream 855559 36668801 ~ 36679505 (+)
LOC110527703 LOC106582676 coding downstream 427771 37950666 ~ 38002305 (+)
LOC110527704 LOC106582678 coding downstream 500879 38035996 ~ 38040937 (+)
LOC110527708 LOC106582612 coding downstream 593263 38128380 ~ 38160898 (+)
LOC110527709 cdd coding downstream 627498 38162615 ~ 38170254 (+)
LOC110527711 LOC106582683 coding downstream 725262 38260379 ~ 38267346 (+)
G602455 NA non-coding upstream 188437 37346428 ~ 37346627 (+)
G602420 NA non-coding upstream 270861 37263766 ~ 37264203 (+)
G602386 NA non-coding upstream 326143 37208401 ~ 37208921 (+)
G602383 NA non-coding upstream 328451 37206392 ~ 37206613 (+)
G602357 NA non-coding upstream 349993 37184792 ~ 37185071 (+)
G603269 NA non-coding downstream 146770 37681887 ~ 37682097 (+)
G603350 NA non-coding downstream 201607 37736724 ~ 37736960 (+)
G603362 NA non-coding downstream 209208 37744325 ~ 37744547 (+)
G603370 NA non-coding downstream 221521 37756638 ~ 37756958 (+)
G603371 NA non-coding downstream 223036 37758153 ~ 37758358 (+)
G602295 gli1 other upstream 444308 37089624 ~ 37090756 (+)
LOC110527686 LOC106582662 other upstream 958992 36573811 ~ 36582978 (+)
G600531 NA other upstream 2563659 34971128 ~ 34971405 (+)
G600431 NA other upstream 2775406 34759347 ~ 34759658 (+)
G600013 NA other upstream 3568309 33966289 ~ 33966755 (+)
G604207 NA other downstream 963914 38499031 ~ 38499662 (+)
G604258 NA other downstream 1049357 38584474 ~ 38594822 (+)
G606400 LOC105027254 other downstream 2591417 40126534 ~ 40141972 (+)
G606452 LOC106582711 other downstream 2671452 40206569 ~ 40206897 (+)
G606464 LOC106582711 other downstream 2688058 40223027 ~ 40224171 (+)

Expression


Co-expression Network