LOC118965380


Basic Information

Item Value
gene id LOC118965380
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 37935371 ~ 37936376 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052706.1
CTGCTCCACTCTTAAGTTGAAGTTGAACTTGTTGACTGATGCCAAGGTAAGAAGGGAGCAGCTGCGAACCAGAGGACTGCAGCCAAGGAAGCACTGGTCCACACCTGCCCAATCTGTCGATGCAGACCCAAAGATTTGCAAGGAACACTTTGAACGCAAGCATCCCAAGTTTCCAATGATCCCAGTACTGGTTGATGTGCAGGCCTAAGTGATGACTACGATTTGAATGCTGCAACTGTGACGGAATAATGTCGAGGGACACGGGCTGAGACCCGTATGACTGGACATGGGCCAGGTTTTTGTGACAATGACCTAAAAGGGGTGCAGAGGCAAACCAGCTCCCCATTTACGTTTATTCCATGGGAAACCTTTTCTCTAGCTACCCCTTATTCCACACTATGCCTTTAATGCACCATGGTCCCTCAATTTTTGACACTTTGGAACTCTCCATCTTATCTCGAAAAAACATGCCCTACCTTCAACCCTTTTCACTATGCTGCTTCCTTCACTTGTTCTTCTGATTTGATAACATCTAGACTCAGTGACAAAGTGTAAGTGTCTTGTATAAAATATTAATtgtttaaatacttttttcccccacctaTTTAATGCTGTCCTCATTCTGGGGTTCAAATTGAATGCAGTGGTACATGTGCTGCTCACAATTGACAGTAGCAACCTGGACCTTGACaagaagggtgttgatatagctaCGTTTAGGCATGGCTTCTTTGTTTTGAGTCTAAGTGTGTTTCTCATTCTGATTGAGTTGACCTAGTATTTTATATTAAACCTACCTTAAGCA

Function

NR:

description
PREDICTED: zinc finger protein 706-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052706.1 True 805 mRNA 0.43 2 37935371 37936376

Neighbor

gene id symbol gene type direction distance location
LOC110527702 ppp1r16b coding downstream 2912 37803814 ~ 37932459 (-)
LOC110527701 LOC102797503 coding downstream 145522 37756561 ~ 37789849 (-)
LOC110527700 NA coding downstream 221225 37710179 ~ 37714146 (-)
LOC110527696 LOC106582672 coding downstream 686916 37239565 ~ 37248455 (-)
gli1 LOC106566129 coding downstream 726419 37087748 ~ 37208952 (-)
LOC110527705 LOC106582679 coding upstream 126913 38063289 ~ 38079634 (-)
LOC110527706 LOC105030694 coding upstream 156827 38093203 ~ 38096522 (-)
LOC110527710 LOC106582681 coding upstream 233807 38170183 ~ 38199500 (-)
LOC110528948 p38a coding upstream 277655 38214031 ~ 38260322 (-)
LOC110527712 LOC106593203 coding upstream 327995 38264371 ~ 38269527 (-)
G603752 NA non-coding downstream 21835 37856518 ~ 37913536 (-)
G603713 NA non-coding downstream 181231 37753725 ~ 37754140 (-)
G603714 NA non-coding downstream 181694 37753406 ~ 37753677 (-)
G603357 NA non-coding downstream 193578 37741541 ~ 37741793 (-)
G603836 NA non-coding upstream 55983 37992359 ~ 38002257 (-)
G603931 NA non-coding upstream 154464 38090840 ~ 38091169 (-)
G603932 NA non-coding upstream 155011 38091387 ~ 38091667 (-)
G601245 NA other downstream 2174101 35760699 ~ 35761270 (-)
G600881 NA other downstream 2880143 35001880 ~ 35055228 (-)
G600872 NA other downstream 2968585 34965447 ~ 34966786 (-)
G600721 NA other downstream 3320496 34614492 ~ 34614875 (-)
LOC110527679 LOC106565035 other downstream 4160757 33770050 ~ 33774908 (-)
G604485 NA other upstream 652779 38589155 ~ 38597519 (-)
G604484 NA other upstream 653041 38584293 ~ 38639400 (-)
LOC110527723 LOC106582696 other upstream 1126629 39063005 ~ 39123578 (-)
G606135 NA other upstream 1902515 39838891 ~ 39841331 (-)
LOC110527741 LOC106582711 other upstream 2287179 40135298 ~ 40275270 (-)

Expression


Co-expression Network