LOC110527706 (LOC105030694)


Basic Information

Item Value
gene id LOC110527706
gene name LOC105030694
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 38093203 ~ 38096522 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052575.1
CAGAAGACgctcagctctgtctctctctgtctctctctcgctccctcccacCGCCTCGTTTCCCTGAGAGCCGTGTTTTGCATCTCTCCCTAATTTGCATTTCTTCTTTAGATTTTCCGTGCGACGGTCTAGCCGCTCGAAATCATAGAATAAGGCGTAGCACCGCAGCAATATCTACATGCTCCCGGCATTTCCAAAGCAATACGCACGGCGGAACCCATTGGAAAATTTGAATAATGTTGCCGAAGCTTTCCGGAAGGTGAAATTGAGGAATATATTTGGATCAATCCGTTTGGTTGCGCACTAGAGGAGACACATGCCTTCGAGGTAAACAGACAGCAGGACTGGACAGCCAGATAGTAGCCTAGGTTATATCGTTTTTCTCCCGCGTTATAAGCGGTTACAGGCTGTTATAACGCCACGGTAGTGGTCCTAAGGTCGAGCAGAGCGTCATATTTTGGTTTGTGCACCTTGGTTGGTTATTGAGACGCAGTTGGAAATGTCGGAAGTACTACAAGACGAAATGAGTCATTATGGAAATGAGGACGATGAGGGACACCTTTCCTTCACCTGTCGCCTCCAAGACACCAACAACTTCTTCAGCGGCTCGCAGGGGGGCAAACGCCCGCCCAAACTTGGACAGATAGGCAGAAGCAAACGAGTCGTCGAGGATGAGAGCGGCGTTGACGAGGCGCAGAAAAACGGGACAGAGAAAACACAGACGGAGGCTTAAACACAccacccccgcccccccccccccccccccgaaagaCATTGATTCTCATTTTCTATTCGAAATCAACAGTTTTAATCCAAAGACACTGTATATAAGCACTTTCATCCCATATGGCAGCAAGCACTTCTAGACCCTCTCCCAGTCCTCATGATGGTGATCTCCTGGGACTTATACTGGCAGGATGGGGAAGCAGCCAAGacaagagatggagatggagacgaACACGGAGACCGAGACGGTGATGGATACAGACGCCCAGGTGAATGCTGTCATGCCAGGGTTTATGCCCATAGAGCTTGTCTAAAACGGGGGATGACCAGCCTTCTACCCAGAGAGCTACTGGGTGAGCAGCAGGCTTTTGCTTCAGCCCTACACATTTTACACTAGTCAATTATTGGTCGTATATAACTCCTAAGCAGGTTGACCAACAAATGTAGCAGTCTGAAAACTGTCTTTTCATGGTCCTGGGTAGCAGCTAATTCGTAGCATTAGGTGTATTAGAGTAGGGATGGATCAAAACCCTGCCGGAGGGGGATAGCTATCAAGGAGGAGGGTCTAAACCATGTGACCAGGAGAGGATGCTGATGGAGGAAGACAATGCTGTCGAACAAACGCAGAAATCAGGGAACAAACTATAGAAATTATCTTATAAactaaagcacacacacacactcttatatCAATCAAACCACATGATATTACATTACCATTCTTTCTGCTCTTGATTCTTCTGATGACGAGTgcaaacaaataaataatataaataacttgtaaataagaaatggtgcagatgtaggatcttaatttgatcaccctgttgcagtaaaacttgtagtgtatgtgaggtttaaaaaggcatcTGAAGTtagtcatttccactttgaaatttcaggcATGATTTCCCTTATGAGAAATGCATCAAACCCtacaaatgtccattaattatgatccacataataattcacatttcctgttgctgcaagattattttcctgctgtagcaaactggctcaaattaagatccctaCATCTGCAGCCCCACGTTCtgttagcctgggtgccagtcggTTTCTGCTCTCTTGTCAACTCCTTGTGGAATTGTCATTTTTGGCGTGACAATTGGTCGTGATATGGACCTGGCAAGATGGCAtgaacagatctgagaccaggctaacgTTTTGTTGCACAGCGGAGAAAATAAGCAGTGAAATGGTTTGTTGTAATCTAACGTAATGTGTCTGTATAAAGAGACCTTATTTATTAAGCCTTTGGAGAAGTTTTTTGCAGTGCTCAAGGCCTGACTGAGGGACAGTTTTGTATGTAGAGAATTATGATGACAGAATTAATGAAGTGATCTTTTCCTTTTTTTACTTCTTATAAATTTTGATGTCGCCTGATCAGTTTTTGTTACCATCCTTTGCATCTATAGAGTCATGTATACAcattatacagtactgtacatcacTGGTTTGTAAGGCACCAAAAGGCCTAAAGTCTGGATTGTTAAATATAACTGTACACACTCCCTATTTATTAACTATTTCTATTGCATTGCGCATTATCACGTGTGCCAAATATCAGGAGGGATAACCAGACAACATGGTTGCTTATGTTGTGCTTTCTATACGTTTAATTGTAACAATTTTGTTATTCTTCTGTTGTTGCCATTGTTCAGGGCTTTTTCTTACCACTGAATTACCAACTGATGCATGGCAGAAATGGAATCATGCATGCATGGCAATGTTCTGAAGATGATCTTGTGTATTCTAGAACACCTCCTATACCACTTGGAATGACTATCCTCCAGAACAGTCTTAATATGACGTAcgttgtactgtgctgtactattATCTCACTGATTTGTACAGTAGTCTAATATCTTGTAATAAAGATTCCGAATAAGTTAA
>TU687852
GTGCGACGGTCTAGCCGCTCGAAATCATAGAATAAGGCGTAGCACCGCAGCAATATCTACATGCTCCCGGCATTTCCAAAGCAATACGCACGGCGGAACCCATTGGAAAATTTGAATAATGTTGCCGAAGCTTTCCGGAAGGTGAAATTGAGGAATATATTTGGATCAATCCGTTTGGTTGCGCACTAGAGGAGACACATGCCTTCGAGGTAAACAGACAGCAGGACTGGACAGCCAGATAGTAGCCTAGGTTATATCGTTTTTCTCCCGCGTTATAAGCGGTTACAGGCTGTTATAACGCCACGGTAGTGGTCCTAAGGTCGAGCAGAGCGTCATATTTTGGTTTGTGCACCTTGGTTGGTTATTGAGACGCAGTTGGAAATGTCGGAAGTACTACAAGAgatggagatggagacgaACACGGAGACCGAGACGGTGATGGATACAGACGCCCAGGTGAATGCTGTCATGCCAGGGTTTATGCCCATAGAGCTTGTCTAAAACGGGGGATGACCAGCCTTCTACCCAGAGAGCTACTGGGTGAGCAGCAGGCTTTTGCTTCAGCCCTACACATTTTACACTAGTCAATTATTGGTCGTATATAACTCCTAAGCAGGTTGACCAACAAATGTAGCAGTCTGAAAACTGTCTTTTCATGGTCCTGGGTAGCAGCTAATTCGTAGCATTAGGTGTATTAGAGTAGGGATGGATCAAAACCCTGCCGGAGGGGGATAGCTATCAAGGAGGAGGGTCTAAACCATGTGACCAGGAGAGGATGCTGATGGAGGAAGACAATGCTGTCGAACAAACGCAGAAATCAGGGAACAAACTATAGAAATTATCTTATAAactaaagcacacacaca

Function

GO:

id name namespace
GO:0006469 negative regulation of protein kinase activity biological_process
GO:0004860 protein kinase inhibitor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052575.1 False 2643 mRNA 0.43 2 38093203 38096522
TU687852 True 866 lncRNA 0.47 2 38094441 38096404

Neighbor

gene id symbol gene type direction distance location
LOC110527705 LOC106582679 coding downstream 13569 38063289 ~ 38079634 (-)
LOC118965380 NA coding downstream 156827 37935371 ~ 37936376 (-)
LOC110527702 ppp1r16b coding downstream 160744 37803814 ~ 37932459 (-)
LOC110527701 LOC102797503 coding downstream 303354 37756561 ~ 37789849 (-)
LOC110527700 NA coding downstream 379057 37710179 ~ 37714146 (-)
LOC110527710 LOC106582681 coding upstream 73661 38170183 ~ 38199500 (-)
LOC110528948 p38a coding upstream 117509 38214031 ~ 38260322 (-)
LOC110527712 LOC106593203 coding upstream 167849 38264371 ~ 38269527 (-)
LOC110527714 LOC103464903 coding upstream 207508 38304030 ~ 38499669 (-)
LOC110527715 LOC106582687 coding upstream 435410 38531932 ~ 38659391 (-)
G603932 NA non-coding downstream 1536 38091387 ~ 38091667 (-)
G603931 NA non-coding downstream 2034 38090840 ~ 38091169 (-)
G603836 NA non-coding downstream 90946 37992359 ~ 38002257 (-)
G603752 NA non-coding downstream 179667 37856518 ~ 37913536 (-)
G603938 NA non-coding upstream 3870 38100392 ~ 38100646 (-)
G603956 NA non-coding upstream 33554 38130076 ~ 38130550 (-)
G603960 NA non-coding upstream 36039 38132561 ~ 38132803 (-)
G603962 NA non-coding upstream 37544 38134066 ~ 38134298 (-)
G601245 NA other downstream 2331933 35760699 ~ 35761270 (-)
G600881 NA other downstream 3037975 35001880 ~ 35055228 (-)
G600872 NA other downstream 3126417 34965447 ~ 34966786 (-)
G600721 NA other downstream 3478328 34614492 ~ 34614875 (-)
LOC110527679 LOC106565035 other downstream 4318589 33770050 ~ 33774908 (-)
G604485 NA other upstream 492633 38589155 ~ 38597519 (-)
G604484 NA other upstream 492895 38584293 ~ 38639400 (-)
LOC110527723 LOC106582696 other upstream 966483 39063005 ~ 39123578 (-)
G606135 NA other upstream 1742369 39838891 ~ 39841331 (-)
LOC110527741 LOC106582711 other upstream 2127033 40135298 ~ 40275270 (-)

Expression


Co-expression Network