LOC110527718 (LOC106582690)


Basic Information

Item Value
gene id LOC110527718
gene name LOC106582690
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 38770498 ~ 38793057 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609175.2
tggacagggtgcactctctctctctgcatagaTGTCCGCTGGCGCATGTGACTTACCAGAAAGTACAGAGAACGGGGAAAAGACAATTCCCTCGCCGCAATTACTAGAGATTGTATTGGAGCTGATCGTACCGCCAGGGACAGTTGCCACTGTAGCCTTTAAAAAACACTCTGCTCTGCGTTTGTGAGCAAACTTTGGTTTTGGCAAAGAAGACTGGATTCTACGCGGAACACCTTTGTAAAAAGAACCGGAATATAACGAAcgatttttttttcaattttctatTCTTATTAATGATGACGACTAGTGGTGGTGCGAACTGAATTGAGGTGGCCAGTGTGACTCAATTACACATTCTCTGGGAAAATTGTTCCTCCTCATTTTTTGGGGAGTGGGACACCAGACTTTCACTAAAACCACAATATGCATGATGTGTCCAAACCAGGGTCCACATTCTGCCCAGTAATGCAGGCTCAAAAATGACTTTTCAACCAATATATCTAGATGCATAACTTCCTATGGATCGAACAACAGAACACCATGCGCAGGCTTAAAGAAGAGTTCCAATGCCTCTCCGAATTCCACAAGGGAATATGAGGACTTCTCCACTCTGTCTTTCTGAGATGCTAGCAGCACCAGACAACAGGACCGACCAGGCTAACGGCACGATGCCCGTTGAAGCCATCTACATCGTGATGGAGGTGATCATCGCAGTGACTTCGGTGTTCGGAAACGTGATGGTTATCTGGGCGGTGCGGATCAACCGTTCGATGCGAGACACCACCTTCTGTTTCATTGTGTCTCTGGCTCTGGCGGACATTGCGGTGGGGGCTCTGGTCATCCCGCTGGCCATCACCATCAACATCGGTTTTGAGATGCACTTCTACAGCTGCCTGCTGGTCACGTGCATCGTGCTGGTGCTCACGCAGAGTTCCATCTTCGCGTTGCTGGCCATCGCTATCGACCGTTACCTGAGGGTGAAAATACCCATGAGCTACAAACATGTGGTGACACGGCGGCGTGCAGGCACGGCGGTGGTGGTGTGTTGGATGGTTGCCATAGTGGTTGGCCTGACGCCCATGCTGGGCTGGAACAACCGGCAGTGTCTCCATGACAACGTCTCCCAGGTGATGTGTACGTTTGAGAAAGTCATCAGCATGGACTACATGGTCTACTTCAACTTCTTCGGCTGGGTGCTGCCGCCCCTCGTCCTCATGCTGCTAATCTATGCTGAGATATTCTACAAGATACACCACCAGCTCAACAAGAAGGTGACGGAGAGCCACATAGACCGCAGCCATTACTACAGTAAGGAGCTGAAACTAGCCAAGTCATTGGCTCTGGTCCTCTTCCTGTTTGCCATCAGCTGGCTTCCTCTAAACATCCTCAACTGCATCACGCTGTTTAGCCCAAATGGTGACAAGCCCACGCTTCTCATCTACATTGCCATCCTGCTCACACACGGCAACTCCGCTGTGAACCCCATTGTCTACGCATTCCAGATCAAGAAGTTCCAGAATGCGTTCCGGAAGATCTGGAAGCAATATGTGCTGTGTAGGGACCCGGAAGGCAAGCTGCCCCAGAGAGGGAGTCAGAGGTGCCAGAGCAGATTGGAGAGGATGTTGAGGGCGAACGATGATAACAGTTATGTCTGATCTGGTGATGAAGGTCATAGGGGGGCACGGGTCTGTCGCATCCCACAATGTGTATGTTGTTTGGTGTGGCGTTCTTTTACGCTTTTTAAATTTGTACACTTTGTTTGTTAACCATCTGTCAATGATGGCTTTTCAGTGGTGGGGTGTTGGACTGATCGTGTTGATCATGAACATACTCGGTACTAAATTGACTTATGGAAACGCTGCCGGTAGCGGAATCCAATAAAGCAGAGTTTCTACTACAATGCAACTCAAACCACGAACGTAATGGATATCCCAAGGGCCAATCTAATCCCTGATTGTCTGCGAGTGGATTACAAACCCAAATGTAAATGTGGAAAACGCAGGGGAATCAGACAGAGAAGTATGACAGGATAGTAGACAGTATAAATAAAAAACATCCCTTACCTACCACCTTGCTGATCAACGCCCAGTCACTGAAGGGGAAACTACTTGGAGGCCTGTTTGTTGGCATTTACTGAGACTTGGCTGGATGAGTCCCAGACATGGAAGTGGAGTCGGCTGGCTTCACACTGGCCAGATCGTGATCTGACCGTCACAGGGACTAGTAGTGTAAATGGATCCCCGTAAGAGAGAGACTCTGTACCCACAATATTGAACTGCTTTCTGTGTCACTGCGACCCTACTATCTGCCCTGTGAGTTCCCCCAATTGTTTGTTACCGTTGTGTACATTCAACCAAAAGATAATATAGCAAAGGCATCAGATATTATTTATAATCTGTCACAGAAACTGGGTACCATCTCCCCCGACGCACCCACATTTATTTTAAGGGATTTTAACAACAGCACTTTGCACAAGGTCCTGCACACGTACCACcagtatgtgaaatgtcacacTAGGAAAAACAAGACTCTTGACCTGTGCTATGGGACCATACCAAATGCTTTCTCTGCCACCAACGGACCTCCCCTGGGGACATCTGACCACAATGTTGTCTACCTCCAGCCAACCGACTGTTAGCTCTTGGAGAGGGAGAAACCTACAGTTAAAACTGTCCAGATCTGGAACGACAACAGTATCACTCCTCTCcaagggtgttttgactgtactatgtgggaggtatttgaaGACAGCAGCTCTGATCTTAACAAACTCACAGATGTTGTTTCAGACCGTGTCAACTTCTGTGTTGAGTCAGTTGTGCCTATTAAAACCAGTAAAGAATTCCCTAACAATAAGCCTTGGGTATCAAAACATCTAAAATCACTACTTGATAGGAAGAAGGCAGTTTATGCTGAGGGTGATAGACAGGCTTTAAGAGATGCACAACGTGAGATAAAAAGACAGATACTAGTGGACAAGGAGGCATGCATGCAAAGGGTGGAGAGGACCCTCTCCTCAGGAAACTCAAGGGTGGCCTGGCAAAAGATTAAATACATGGCTCGTGCCACCCACATAGGCAGGGGAAAAAACAATGCTGACCTTGGGAGACATGAGGGCCAGAACAAGGCTAATGAACTGAATGTTTTCTTCTCAAGATTTGAATCAGACGACTTAGGAAGCAAACAAACAAATGGAAGCATCATTACACGTGTTTGAGAGGGTTGTTGTTAAACAGGCTGATGTTTTGAAGTTGTTCAGTGGATGTAATGCACAAAAAAAGCCTAGGCCTGGACAAAATAAGTGGACATTGAAGCACTGTGATGAACAAATAGTTGGTGtttttacagacattttccaATCCTCGCTCGACCGGCAACTGTGGTGGAATATTGACTCAGAAATATAACACatttacaatacaacacaacacatgccAGTATTGTGGAAAAACTCAATAATTATACCCATTCCTAAAGCATCTTAGCCCTCTTTGCTGCATGACCCTGTCGCCTTGACATCCTTAGGAAGGAAATGCTTTGAGAAAGTTGTGAAAGGTCATATTCTCAGCACCACCCGTTTCAGTTTGCCTATCAGCCCAGCAGAGGAGTTGATGATGCCATTCTCACTCTCCTCGACATGATCTACAGACATCAAGAGGGCGCCAAATCCCATGTCAGTGTTCTGTTGTTGACTTTTCTTCTGCCTTCAACACAATCCAGCCTTATATTCTGGCACAGACTCATAAGGGACTTCTCCTGAGATGGGGGGCTGGTTTTGTGGCTGTTGGACTTCCTGAGCCAGATGTCACAGTGGGTCAAGTTGGGTGTCGGACATATgcaccaccaacacaggctccccacagggatgtgttttgtccccactccTGTACATTTTGTACACCAATAGTTGTACTAGTTCACATCCTGACAGACACCTAGTTAAATTCGCTGTGAGATGTGCATAGACTTCAAGAAGCgtacaacacctacctctgcatCATCTGTCAGAGGTCAGAACATAGAGATAGAGgaatacaaatacctgggtgtcctcttggacaataagcgtcagtggagtaaatgtacagacctgatctacTAAAAGAGTCAACAGAGACTGTACTTTCTAAAAAAGCTGGGATCTTTTAATGTTGAGAGTATTTaaactttttgtattgtttgttggtttggcaattCCTGTGTCAGCCAGAGAAAGATCCCgagaaggattatcaccacagcaagcaaggtacttaGTTAAACAGACAGACCCTCAGCAAGGCTCATAAAATtattttagacccaagccaccccctgtacccggactttgaactactcccctctgggTGCAGGTCTAGGGCACCCCCTGGCATGAAAACCAAACTAGACAataatttgtgccaggtgtgatatccctcctaaacaGTTCAGGCTGATGTTCCTATCGACaaagtaaggccagcaggctagctAGTCTTTTTTTATTTGGATGTAACTGTTATGAATATTGTGCTGTCAATTAGTGGTATTGTCATGTACATGTTTAAACACCACGTTAAACATGTACATGATACTGCAGCAacatttccccatggggacaataaagtaagtaagtaagtgaaGATGTCGGGAATACTGGATTATAAGAGCTTTAGGATGAACATGACAATGGTTTCTCTGTTGATTCACCTGCTGGTTAGAGAATTATGATTGGATaaagaggtggaggtggtgggagggatCCTAACCCTGCAGTGATTGAACTGAAGGAGGGTTTGGAGAAGggaccctatccctaacccttggCAGAGTCGAGGGGGACCCTAACCTCAGTTTGACCCCACACAGTGAGGAAGTTCTGTCAAGGAATGTTCCTAAATGAGGGTTGAAATGTTACCTCACACAGGCTGAACTAACTATCCACAGGTGGCTGGGTTCCCATACCGTAACCGTGGGTGATTTAATCTCTCTACATTCTAGAATGCAGCAGAATGGCGTCACTCCTAATACATCACTAAGGTCCATCGACTGACAAGACAGGTTGTACTGTCTGACCTGATGCAAgacaacagaacagaatagaccAATGGAGAGGTCAGGTCAGAATGGTGATTTAGGATTCCGAATTAGAAGGAAGGCAGAACTACTAACAATGACTTCAACCATCTCCCATCGGCTTAGGGAACGATGATGTGTAACGGGTGAAGGGGGTATCCGGCATGTACCAATAGGAACCTGTTGAACTATTAGTAGCACACtatggctgtgtctgaaatgacaGGAATCCTGACTTTCATTCTCCTCCAATGACCCGTTAATCGTGCTCTTCAGGGCTGCAAAGCCCGCTGCCACCTGGAGGGTAAAAACCTTGCTCGAGGCATCATCCTCCCCTACAAAATCAAACATAATCTATATAACACAAGACCAACATTAACTATTGTAATTCAGCCTGAAATGTACATTTATCGTGCTGAGTTTCTCAACAAGTG

Function

NR:

description
adenosine receptor A1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609175.2 True 5489 mRNA 0.46 3 38770498 38793057

Neighbor

gene id symbol gene type direction distance location
LOC110527716 LOC106582688 coding downstream 13013 38703237 ~ 38757485 (-)
LOC110527715 LOC106582687 coding downstream 111107 38531932 ~ 38659391 (-)
LOC110527714 LOC103464903 coding downstream 270829 38304030 ~ 38499669 (-)
LOC110527712 LOC106593203 coding downstream 500971 38264371 ~ 38269527 (-)
LOC110528948 p38a coding downstream 510176 38214031 ~ 38260322 (-)
LOC110527719 LOC106582691 coding upstream 65811 38831707 ~ 38862874 (-)
LOC110527720 LOC106582692 coding upstream 69962 38863019 ~ 38866559 (-)
LOC110527721 LOC106582693 coding upstream 98757 38891814 ~ 38916821 (-)
LOC110527722 LOC106582694 coding upstream 140744 38933801 ~ 39055212 (-)
LOC110527723 LOC106582696 coding upstream 271157 39063005 ~ 39123578 (-)
G604631 NA non-coding downstream 72676 38697516 ~ 38697822 (-)
G604491 NA non-coding downstream 163776 38606457 ~ 38606722 (-)
G604484 NA non-coding downstream 176678 38584293 ~ 38639400 (-)
G604058 NA non-coding downstream 489707 38280490 ~ 38280791 (-)
G604049 NA non-coding downstream 499568 38270689 ~ 38270930 (-)
G604706 NA non-coding upstream 13167 38806224 ~ 38806443 (-)
G604708 NA non-coding upstream 13440 38806497 ~ 38806712 (-)
G605414 LOC100846954 non-coding upstream 95152 38888209 ~ 38891559 (-)
G605454 NA non-coding upstream 130167 38923224 ~ 38923464 (-)
G604485 NA other downstream 172979 38589155 ~ 38597519 (-)
G601245 NA other downstream 3009228 35760699 ~ 35761270 (-)
G600881 NA other downstream 3715270 35001880 ~ 35055228 (-)
G600872 NA other downstream 3803712 34965447 ~ 34966786 (-)
G606135 NA other upstream 1045834 39838891 ~ 39841331 (-)
LOC110527741 LOC106582711 other upstream 1430498 40135298 ~ 40275270 (-)
G606973 NA other upstream 1836192 40629249 ~ 40629880 (-)
LOC110527764 LOC106582736 other upstream 2363613 41156665 ~ 41348915 (-)

Expression


Co-expression Network