LOC110527750 (LOC106582617)


Basic Information

Item Value
gene id LOC110527750
gene name LOC106582617
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 40452385 ~ 40454645 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609248.2
GTCATAGAGGAACTATTCACAATAAAGCATACTCAGTCATAGAGTAAACTTCCATTGGACAGCTGACATGATGTCTGGAGGAGAGGTGGTCTACACAGTGCTGGAGGTGCTGATCGCCATTGCCTGCTGCCTGGGAAATGTGCTGGTTATCTGGGCAGTGTGGTCAAGCAGTGCTCTGCGGCAGCCCATCTTCTGCTTTATGGTTTCTCTGGCTGTGGCTGACTTCCTCGTAGGGTCTGTGGCCATGCCACTGGCTGTACTGGTGGATGGACGGGTGCAGACCTCGTTCAATGTCTGTCTCTTCATTAGCTGTGTGGTCATCATGTTGACAGTGGCCTCAGTCTTGTCACTGCTAGCCATTGCTGTGGACCGATACCTACGCGTCTTCATCCCTCTCAGCTACAAGAGGACGGTAACAGAGAGAAGATCTTGGGTGGTAGTAGCAACATGTTGGTTTGTTGCTTTCATATTGAGCTTCCCTCCCATGTTTGGATGGTACAATCGTGAAACGTTGTCTCACTCAGAGAACTCGACCGCAATCCTCTGCCATTTCCTGGCTGTGATCCCCATGTCATACATTGTTTACTTCAATTTCTTCCTCTGCATCCTCACCCCGTTAATTGTCATGGCTGTCCTGTACATCTACATTTTCTGTACCATCTGGAGGAACCTGAGGGAGAAAGCAGGGCACGGGGCCCAGTCCCACACCTACTTCAGGAAGGAGAGGAGCCTGGCCCAATCCCTGGCTCTGGTCCTGGTGCTGTTCGCCTTCTGCTGGCTCCCCCTGCACATTATGAACTGTGCTGCCTACTTTGGCAGCCCGTCAGACATACCCCACACCGCCTTCTATGTGGGCATCCTCCTTTCCCATGCCAATTCAGCGGTCAACCCAGTCGTCTATGCCTTCAAGATCCGCAGGATCCAGGGCGCGTACCTGAGGATCTGGAGGAGGTTCTTGGTGTGTCGCGATGACAACCAGGGCTCTCAGAGCAATCGTTCCACTGAGCACAATATCAGCAGCAACCCTAACAATGTGAGCAAGGGATAGTCAACGATGCGCTAAACGCTAATCCCACAGATTTATTCTCTGATACTTTGAAAAAGACAATCCCAGGGATGCAGATGTGGTCTACATCATTAATATCCTAACGAGCATGATCTTATCATCAAAACCATACTCACATTATATTTGGATTCTCTACTAAAAACCTTAGCTGACAAAATGGTTATTTTTAAGTTTTCACTTCCGTTTTCATTGATTTGATCAAAAATTAAACAGCCGACCACATGTTGGATTTGTCTCGTTTCCATGCTTTGAATGGCACAAGCTGTCTGCGATGGATGGGAGAGTTACTACAATCCATGCTCAATTTTCATGTTTTAAATCAGACCTCCTGAAAAGGTAGAAATACAAGAAAGGGATCAATAAATATGCGTGAGTTTGTCTGATTTGGAAACAGATAATACCAAACAAACGGGCTGCTCCATCTTGTGTCGATAGGTAGCCTATATTCTTTGTCAGTGCAAGACAGAGAGGGGACTTCACGACAGTGAAATTTGTGTGTGCAGTGCCACGGAAATTCAGCAGTTTGTTGATTTGTTGATACATTTAAACAGTATATGACAAGTCATCATGTACTATCATCACCCTCTGTTTGTAACAGACCGGTAGAAAATGAATGGCAGCGGACGGGGTTAAGCTAGCAATGTTAACTTCTATGCCtttccctaacccttaccttaacatCACAAAATGATGCTTCACCTTAATGGCGAAACCGCCATGTCCGTTTGCGATATTACTCAAATAAAAAACATAAGCTGGCGCACACCCTGAGAAAATTATTTTATGTAGAGGTGTTGAAAAAACTATAAACTAAAACGGTAAATAAACTGTAAGCTATAAAAACAAAGAGAGTCGCACACTCTATATATAAACTCCcggtaatttattgggtaaatcatCCAACGTTACGGAATCactaccctgaagaaggcacagtggatGCCGAAACATTCATGATTTACCCAATACATTACTGGGAGTTTATGTATAGAGTGTGCGACTctctttattttatatat

Function

NR:

description
adenosine receptor A1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609248.2 True 2085 mRNA 0.45 2 40452385 40454645

Neighbor

gene id symbol gene type direction distance location
LOC110527748 tulp1 coding downstream 13331 40418035 ~ 40439054 (-)
LOC110527745 LOC106582716 coding downstream 46584 40365303 ~ 40405801 (-)
smpd2b smpd2 coding downstream 91799 40348061 ~ 40360586 (-)
pkp1b LOC106582715 coding downstream 106245 40324506 ~ 40346140 (-)
LOC110527741 LOC106582711 coding downstream 177115 40135298 ~ 40275270 (-)
LOC110527754 LOC106582722 coding upstream 53097 40507742 ~ 40513295 (-)
LOC110527755 LOC106582604 coding upstream 105713 40560358 ~ 40562952 (-)
LOC110527756 LOC106582724 coding upstream 131263 40585908 ~ 40596388 (-)
LOC110527758 LOC105008416 coding upstream 148806 40603451 ~ 40612049 (-)
slc25a55a LOC106582726 coding upstream 279247 40733892 ~ 40749263 (-)
G606842 NA non-coding downstream 2562 40448168 ~ 40449823 (-)
G606841 NA non-coding downstream 4401 40447529 ~ 40447984 (-)
G606840 NA non-coding downstream 5139 40445997 ~ 40447246 (-)
G606839 NA non-coding downstream 6565 40445027 ~ 40445820 (-)
G606838 NA non-coding downstream 7460 40444670 ~ 40444925 (-)
G606845 NA non-coding upstream 2387 40457032 ~ 40457693 (-)
G606853 NA non-coding upstream 13153 40467798 ~ 40468049 (-)
G606854 NA non-coding upstream 13526 40468171 ~ 40468455 (-)
G606875 NA non-coding upstream 36993 40491638 ~ 40491878 (-)
G606877 NA non-coding upstream 39232 40493877 ~ 40506465 (-)
G606135 NA other downstream 611054 39838891 ~ 39841331 (-)
LOC110527723 LOC106582696 other downstream 1383557 39063005 ~ 39123578 (-)
G604484 NA other downstream 1812985 38584293 ~ 38639400 (-)
G604485 NA other downstream 1854866 38589155 ~ 38597519 (-)
G606973 NA other upstream 174604 40629249 ~ 40629880 (-)
LOC110527764 LOC106582736 other upstream 702025 41156665 ~ 41348915 (-)
G607932 NA other upstream 706503 41161148 ~ 41163397 (-)
G608888 LOC106582750 other upstream 1489926 41944571 ~ 41951244 (-)
G608900 NA other upstream 1513924 41968569 ~ 42025704 (-)

Expression


Co-expression Network